RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 EPORP19235 508 aa13.75□□□□□ -0.21
RTN4-202ENST00000337526 CES1P23141 567 aa13.75□□□□□ -0.21
RTN4-202ENST00000337526 TPP2P29144 1249 aaPredicted RBP13.75□□□□□ -0.21
RTN4-202ENST00000337526 SPIDRQ14159 915 aa13.75□□□□□ -0.21
RTN4-202ENST00000337526 TAB1Q15750 504 aa13.75□□□□□ -0.21
RTN4-202ENST00000337526 AP5B1Q2VPB7 878 aa13.75□□□□□ -0.21
RTN4-202ENST00000337526 XKR6Q5GH73 641 aa13.75□□□□□ -0.21
RTN4-202ENST00000337526 CFAP52Q8N1V2 620 aa13.75□□□□□ -0.21
RTN4-202ENST00000337526 KBTBD8Q8NFY9 601 aa13.75□□□□□ -0.21
RTN4-202ENST00000337526 EMID1Q96A84 441 aaPredicted RBP13.75□□□□□ -0.21
RTN4-202ENST00000337526 TSSK3Q96PN8 268 aa13.75□□□□□ -0.21
RTN4-202ENST00000337526 BTBD9Q96Q07 612 aa13.75□□□□□ -0.21
RTN4-202ENST00000337526 OLFM1Q99784 485 aa13.75□□□□□ -0.21
RTN4-202ENST00000337526 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.75□□□□□ -0.214e-7■■■■■ 30.7
RTN4-202ENST00000337526 UNC93B1Q9H1C4 597 aa13.75□□□□□ -0.21
RTN4-202ENST00000337526 ATXN10Q9UBB4 475 aa13.75□□□□□ -0.21
RTN4-202ENST00000337526 DPP7Q9UHL4 492 aa13.75□□□□□ -0.21
RTN4-202ENST00000337526 ERGIC3Q9Y282 383 aa13.75□□□□□ -0.21
RTN4-202ENST00000337526 KCNE2Q9Y6J6 123 aa13.75□□□□□ -0.21
RTN4-202ENST00000337526 G3V2T6 193 aa13.74□□□□□ -0.21
RTN4-202ENST00000337526 H0YC42 278 aa13.74□□□□□ -0.21
RTN4-202ENST00000337526 CBFA2T3O75081 653 aa13.74□□□□□ -0.21
RTN4-202ENST00000337526 TRMUO75648 421 aaKnown RBP13.74□□□□□ -0.21
RTN4-202ENST00000337526 JAK1P23458 1154 aa13.74□□□□□ -0.21
RTN4-202ENST00000337526 CYP4F2P78329 520 aa13.74□□□□□ -0.21
RTN4-202ENST00000337526 CYP4F3Q08477 520 aa13.74□□□□□ -0.21
RTN4-202ENST00000337526 PPP1R15BQ5SWA1 713 aa13.74□□□□□ -0.21
RTN4-202ENST00000337526 CLEC6AQ6EIG7 209 aa13.74□□□□□ -0.21
RTN4-202ENST00000337526 ESRP1Q6NXG1 681 aaKnown RBP13.74□□□□□ -0.21
RTN4-202ENST00000337526 C11orf88Q6PI97 169 aa13.74□□□□□ -0.21
RTN4-202ENST00000337526 USP50Q70EL3 339 aaPredicted RBP13.74□□□□□ -0.21
RTN4-202ENST00000337526 PARP8Q8N3A8 854 aa13.74□□□□□ -0.21
RTN4-202ENST00000337526 TRPM4Q8TD43 1214 aa13.74□□□□□ -0.21
RTN4-202ENST00000337526 DQX1Q8TE96 717 aaKnown RBP13.74□□□□□ -0.21
RTN4-202ENST00000337526 C10orf82Q8WW14 230 aa13.74□□□□□ -0.21
RTN4-202ENST00000337526 ITCHQ96J02 903 aa13.74□□□□□ -0.21
RTN4-202ENST00000337526 ZNF317Q96PQ6 595 aaPredicted RBP13.74□□□□□ -0.21
RTN4-202ENST00000337526 RHOBTB2Q9BYZ6 727 aa13.74□□□□□ -0.21
RTN4-202ENST00000337526 CLN6Q9NWW5 311 aa13.74□□□□□ -0.21
RTN4-202ENST00000337526 DTLQ9NZJ0 730 aa13.74□□□□□ -0.21
RTN4-202ENST00000337526 NADKO95544 446 aaPredicted RBP13.74□□□□□ -0.21
RTN4-202ENST00000337526 IDH3AP50213 366 aa13.74□□□□□ -0.21
RTN4-202ENST00000337526 MAP2K5Q13163 448 aa13.74□□□□□ -0.21
RTN4-202ENST00000337526 FAM151BQ6UXP7 276 aa13.74□□□□□ -0.21
RTN4-202ENST00000337526 SPATA19Q7Z5L4 167 aa13.74□□□□□ -0.21
RTN4-202ENST00000337526 GATAD2AQ86YP4 633 aa13.74□□□□□ -0.21
RTN4-202ENST00000337526 FSTL5Q8N475 847 aaPredicted RBP13.74□□□□□ -0.21
RTN4-202ENST00000337526 NELL1Q92832 810 aa13.74□□□□□ -0.21
RTN4-202ENST00000337526 CRNNQ9UBG3 495 aaPredicted RBP13.74□□□□□ -0.21
RTN4-202ENST00000337526 PSME2Q9UL46 239 aa13.74□□□□□ -0.21
RTN4-202ENST00000337526 MYO5BQ9ULV0 1848 aa13.74□□□□□ -0.21
RTN4-202ENST00000337526 FAM149AA5PLN7 773 aa13.74□□□□□ -0.21
RTN4-202ENST00000337526 GUCY1B2O75343 617 aa13.74□□□□□ -0.21
RTN4-202ENST00000337526 MT-CYBP00156 380 aaPredicted RBP13.74□□□□□ -0.21
RTN4-202ENST00000337526 ICAM3P32942 547 aa13.74□□□□□ -0.21
RTN4-202ENST00000337526 CACTIN-AS1Q8N1I8 211 aa13.74□□□□□ -0.21
RTN4-202ENST00000337526 ZNF557Q8N988 423 aaPredicted RBP13.74□□□□□ -0.21
RTN4-202ENST00000337526 AZIN2Q96A70 460 aa13.74□□□□□ -0.21
RTN4-202ENST00000337526 BTN2A3PQ96KV6 586 aa13.74□□□□□ -0.21
RTN4-202ENST00000337526 CCNB1IP1Q9NPC3 277 aa13.74□□□□□ -0.21
RTN4-202ENST00000337526 IL6P05231 212 aa13.74□□□□□ -0.21
RTN4-202ENST00000337526 CCNCP24863 283 aa13.74□□□□□ -0.21
RTN4-202ENST00000337526 L1CAMP32004 1257 aa13.74□□□□□ -0.21
RTN4-202ENST00000337526 DMPKQ09013 629 aa13.74□□□□□ -0.21
RTN4-202ENST00000337526 SLC10A6Q3KNW5 377 aa13.74□□□□□ -0.21
RTN4-202ENST00000337526 ZNF544Q6NX49 715 aa13.74□□□□□ -0.21
RTN4-202ENST00000337526 DSG4Q86SJ6 1040 aa13.74□□□□□ -0.21
RTN4-202ENST00000337526 RALGPS2Q86X27 583 aaPredicted RBP13.74□□□□□ -0.21
RTN4-202ENST00000337526 CBR4Q8N4T8 237 aa13.74□□□□□ -0.21
RTN4-202ENST00000337526 UXS1Q8NBZ7 420 aa13.74□□□□□ -0.21
RTN4-202ENST00000337526 TWIST2Q8WVJ9 160 aa13.74□□□□□ -0.21
RTN4-202ENST00000337526 S100ZQ8WXG8 99 aa13.74□□□□□ -0.21
RTN4-202ENST00000337526 EBF4Q9BQW3 602 aa13.74□□□□□ -0.21
RTN4-202ENST00000337526 NBNO60934 754 aa13.73□□□□□ -0.21
RTN4-202ENST00000337526 RPP40O75818 363 aaKnown RBP13.73□□□□□ -0.21
RTN4-202ENST00000337526 VNN1O95497 513 aa13.73□□□□□ -0.21
RTN4-202ENST00000337526 GSTM5P46439 218 aa13.73□□□□□ -0.21
RTN4-202ENST00000337526 GNPDA1P46926 289 aa13.73□□□□□ -0.21
RTN4-202ENST00000337526 CDK9P50750 372 aaKnown RBP13.73□□□□□ -0.21
RTN4-202ENST00000337526 PTSQ03393 145 aa13.73□□□□□ -0.21
RTN4-202ENST00000337526 TMEM63BQ5T3F8 832 aa13.73□□□□□ -0.21
RTN4-202ENST00000337526 SH3PXD2AQ5TCZ1 1133 aa13.73□□□□□ -0.21
RTN4-202ENST00000337526 CYP20A1Q6UW02 462 aa13.73□□□□□ -0.21
RTN4-202ENST00000337526 DCBLD1Q8N8Z6 715 aa13.73□□□□□ -0.21
RTN4-202ENST00000337526 USP7Q93009 1102 aa13.73□□□□□ -0.21
RTN4-202ENST00000337526 ZNF624Q9P2J8 865 aaPredicted RBP13.73□□□□□ -0.21
RTN4-202ENST00000337526 SIGLEC1Q9BZZ2 1709 aa13.73□□□□□ -0.21
RTN4-202ENST00000337526 COL1A2P08123 1366 aa13.73□□□□□ -0.21
RTN4-202ENST00000337526 TSPAN1O60635 241 aa13.73□□□□□ -0.21
RTN4-202ENST00000337526 TNFRSF21O75509 655 aa13.73□□□□□ -0.21
RTN4-202ENST00000337526 METTL18O95568 372 aa13.73□□□□□ -0.21
RTN4-202ENST00000337526 MT-ND1P03886 318 aa13.73□□□□□ -0.21
RTN4-202ENST00000337526 CYP4B1P13584 511 aa13.73□□□□□ -0.21
RTN4-202ENST00000337526 EIF2B5Q13144 721 aaKnown RBP13.73□□□□□ -0.21
RTN4-202ENST00000337526 TAPT1Q6NXT6 567 aa13.73□□□□□ -0.21
RTN4-202ENST00000337526 ARMC8Q8IUR7 673 aa13.73□□□□□ -0.21
RTN4-202ENST00000337526 NAT8LQ8N9F0 302 aa13.73□□□□□ -0.21
RTN4-202ENST00000337526 FAM156AQ8NDB6 213 aa13.73□□□□□ -0.21
RTN4-202ENST00000337526 BORCS5Q969J3 196 aa13.73□□□□□ -0.21
RTN4-202ENST00000337526 NFKBIZQ9BYH8 718 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms