RNA–Protein interactions for RNA: ENST00000336128.11

ZNF548-201, Transcript of zinc finger protein 548, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ZNF548, Length 2,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-201ENST00000336128 RASSF4Q9H2L5 321 aa12.43□□□□□ -0.42
ZNF548-201ENST00000336128 FAM96AQ9H5X1 160 aa12.43□□□□□ -0.42
ZNF548-201ENST00000336128 ACSS2Q9NR19 701 aa12.43□□□□□ -0.42
ZNF548-201ENST00000336128 SAR1AQ9NR31 198 aa12.43□□□□□ -0.42
ZNF548-201ENST00000336128 ZMYM5Q9UJ78 669 aa12.43□□□□□ -0.42
ZNF548-201ENST00000336128 SLC25A13Q9UJS0 675 aa12.43□□□□□ -0.42
ZNF548-201ENST00000336128 HS3ST2Q9Y278 367 aa12.43□□□□□ -0.42
ZNF548-201ENST00000336128 FNDC3AQ9Y2H6 1198 aaKnown RBP12.43□□□□□ -0.42
ZNF548-201ENST00000336128 MRPS23Q9Y3D9 190 aaKnown RBP12.43□□□□□ -0.42
ZNF548-201ENST00000336128 H7C0S8 307 aa12.43□□□□□ -0.42
ZNF548-201ENST00000336128 NDUFS3O75489 264 aa12.43□□□□□ -0.42
ZNF548-201ENST00000336128 T-ENOLP0DO92 83 aa12.43□□□□□ -0.42
ZNF548-201ENST00000336128 TYRP14679 529 aa12.43□□□□□ -0.42
ZNF548-201ENST00000336128 ALOX15P16050 662 aaPredicted RBP12.43□□□□□ -0.42
ZNF548-201ENST00000336128 ATP5F1P24539 256 aaPredicted RBP12.43□□□□□ -0.42
ZNF548-201ENST00000336128 FMO4P31512 558 aa12.43□□□□□ -0.42
ZNF548-201ENST00000336128 SLC26A3P40879 764 aa12.43□□□□□ -0.42
ZNF548-201ENST00000336128 SNRPD1P62314 119 aaKnown RBP12.43□□□□□ -0.42
ZNF548-201ENST00000336128 PEX6Q13608 980 aa12.43□□□□□ -0.42
ZNF548-201ENST00000336128 RCN2Q14257 317 aa12.43□□□□□ -0.42
ZNF548-201ENST00000336128 CTC1Q2NKJ3 1217 aa12.43□□□□□ -0.42
ZNF548-201ENST00000336128 LY6G5CQ5SRR4 150 aa12.43□□□□□ -0.42
ZNF548-201ENST00000336128 PSAPL1Q6NUJ1 521 aa12.43□□□□□ -0.42
ZNF548-201ENST00000336128 ELMSAN1Q6PJG2 1045 aa12.43□□□□□ -0.42
ZNF548-201ENST00000336128 ASRGL1Q7L266 308 aa12.43□□□□□ -0.42
ZNF548-201ENST00000336128 TTC7BQ86TV6 843 aa12.43□□□□□ -0.42
ZNF548-201ENST00000336128 PAF1Q8N7H5 531 aa12.43□□□□□ -0.42
ZNF548-201ENST00000336128 ZNF781Q8N8C0 355 aa12.43□□□□□ -0.42
ZNF548-201ENST00000336128 ITFG1Q8TB96 612 aa12.43□□□□□ -0.42
ZNF548-201ENST00000336128 SMG7Q92540 1137 aaKnown RBP12.43□□□□□ -0.42
ZNF548-201ENST00000336128 KLHL29Q96CT2 875 aa12.43□□□□□ -0.42
ZNF548-201ENST00000336128 EBF4Q9BQW3 602 aa12.43□□□□□ -0.42
ZNF548-201ENST00000336128 NMUR2Q9GZQ4 415 aa12.43□□□□□ -0.42
ZNF548-201ENST00000336128 DRC3Q9H069 523 aa12.43□□□□□ -0.42
ZNF548-201ENST00000336128 CDH19Q9H159 772 aa12.43□□□□□ -0.42
ZNF548-201ENST00000336128 STN1Q9H668 368 aaKnown RBP12.43□□□□□ -0.42
ZNF548-201ENST00000336128 TLE6Q9H808 572 aa12.43□□□□□ -0.42
ZNF548-201ENST00000336128 PIDD1Q9HB75 910 aa12.43□□□□□ -0.42
ZNF548-201ENST00000336128 POPDC3Q9HBV1 291 aa12.43□□□□□ -0.42
ZNF548-201ENST00000336128 DNAJC28Q9NX36 388 aa12.43□□□□□ -0.42
ZNF548-201ENST00000336128 IL17CQ9P0M4 197 aa12.43□□□□□ -0.42
ZNF548-201ENST00000336128 HAO1Q9UJM8 370 aa12.43□□□□□ -0.42
ZNF548-201ENST00000336128 YBX2Q9Y2T7 364 aaKnown RBP12.43□□□□□ -0.42
ZNF548-201ENST00000336128 PKP3Q9Y446 797 aa12.43□□□□□ -0.42
ZNF548-201ENST00000336128 RHOBTB1O94844 696 aa12.42□□□□□ -0.42
ZNF548-201ENST00000336128 RBP1P09455 135 aa12.42□□□□□ -0.42
ZNF548-201ENST00000336128 NQO1P15559 274 aaKnown RBP12.42□□□□□ -0.42
ZNF548-201ENST00000336128 MPSTP25325 297 aa12.42□□□□□ -0.42
ZNF548-201ENST00000336128 SERPINA4P29622 427 aa12.42□□□□□ -0.42
ZNF548-201ENST00000336128 CCR10P46092 362 aa12.42□□□□□ -0.42
ZNF548-201ENST00000336128 NAGLUP54802 743 aa12.42□□□□□ -0.42
ZNF548-201ENST00000336128 KCNJ2P63252 427 aa12.42□□□□□ -0.42
ZNF548-201ENST00000336128 CBX2Q14781 532 aaPredicted RBP12.42□□□□□ -0.42
ZNF548-201ENST00000336128 ACAP2Q15057 778 aa12.42□□□□□ -0.42
ZNF548-201ENST00000336128 ZRANB3Q5FWF4 1079 aa12.42□□□□□ -0.42
ZNF548-201ENST00000336128 FAM91A1Q658Y4 838 aa12.42□□□□□ -0.42
ZNF548-201ENST00000336128 PIANPQ8IYJ0 282 aa12.42□□□□□ -0.42
ZNF548-201ENST00000336128 KIF2BQ8N4N8 673 aa12.42□□□□□ -0.42
ZNF548-201ENST00000336128 C12orf76Q8N812 135 aaPredicted RBP12.42□□□□□ -0.42
ZNF548-201ENST00000336128 ZNF557Q8N988 423 aaPredicted RBP12.42□□□□□ -0.42
ZNF548-201ENST00000336128 ISG20Q96AZ6 181 aaKnown RBP12.42□□□□□ -0.42
ZNF548-201ENST00000336128 EID2BQ96D98 161 aa12.42□□□□□ -0.42
ZNF548-201ENST00000336128 OTUB2Q96DC9 234 aa12.42□□□□□ -0.42
ZNF548-201ENST00000336128 MOCOSQ96EN8 888 aa12.42□□□□□ -0.42
ZNF548-201ENST00000336128 POMKQ9H5K3 350 aa12.42□□□□□ -0.42
ZNF548-201ENST00000336128 CERS4Q9HA82 394 aa12.42□□□□□ -0.42
ZNF548-201ENST00000336128 ARL8BQ9NVJ2 186 aa12.42□□□□□ -0.42
ZNF548-201ENST00000336128 A0A0J9YYE9 177 aa12.41□□□□□ -0.42
ZNF548-201ENST00000336128 ZNF195O14628 629 aa12.41□□□□□ -0.42
ZNF548-201ENST00000336128 SRP72O76094 671 aaKnown RBP12.41□□□□□ -0.42
ZNF548-201ENST00000336128 TRBC1P01850 177 aa12.41□□□□□ -0.42
ZNF548-201ENST00000336128 ATP5BP06576 529 aaKnown RBP12.41□□□□□ -0.42
ZNF548-201ENST00000336128 CHRNGP07510 517 aa12.41□□□□□ -0.42
ZNF548-201ENST00000336128 TFEBP19484 476 aa12.41□□□□□ -0.42
ZNF548-201ENST00000336128 DNAJB13P59910 316 aa12.41□□□□□ -0.42
ZNF548-201ENST00000336128 XIAPP98170 497 aa12.41□□□□□ -0.42
ZNF548-201ENST00000336128 PDAP1Q13442 181 aaKnown RBP12.41□□□□□ -0.42
ZNF548-201ENST00000336128 TUBB3Q13509 450 aa12.41□□□□□ -0.42
ZNF548-201ENST00000336128 DMC1Q14565 340 aa12.41□□□□□ -0.42
ZNF548-201ENST00000336128 SHHQ15465 462 aa12.41□□□□□ -0.42
ZNF548-201ENST00000336128 MYLK3Q32MK0 819 aa12.41□□□□□ -0.42
ZNF548-201ENST00000336128 FBXW10Q5XX13 1052 aa12.41□□□□□ -0.42
ZNF548-201ENST00000336128 ZSWIM9Q86XI8 627 aa12.41□□□□□ -0.42
ZNF548-201ENST00000336128 PCDH20Q8N6Y1 951 aaKnown RBP12.41□□□□□ -0.42
ZNF548-201ENST00000336128 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.41□□□□□ -0.42
ZNF548-201ENST00000336128 RILPQ96NA2 401 aa12.41□□□□□ -0.42
ZNF548-201ENST00000336128 TMEM237Q96Q45 408 aa12.41□□□□□ -0.42
ZNF548-201ENST00000336128 CEP44Q9C0F1 390 aa12.41□□□□□ -0.42
ZNF548-201ENST00000336128 CCDC68Q9H2F9 335 aa12.41□□□□□ -0.42
ZNF548-201ENST00000336128 MARK1Q9P0L2 795 aa12.41□□□□□ -0.42
ZNF548-201ENST00000336128 VPS9D1Q9Y2B5 631 aa12.41□□□□□ -0.42
ZNF548-201ENST00000336128 RAP2CQ9Y3L5 183 aa12.41□□□□□ -0.42
ZNF548-201ENST00000336128 ATG2AQ2TAZ0 1938 aa12.41□□□□□ -0.42
ZNF548-201ENST00000336128 C1orf232A0A0U1RR37 186 aa12.41□□□□□ -0.42
ZNF548-201ENST00000336128 NEMP2A6NFY4 417 aa12.41□□□□□ -0.42
ZNF548-201ENST00000336128 CAPN8A6NHC0 703 aa12.41□□□□□ -0.42
ZNF548-201ENST00000336128 SLC9A3R1O14745 358 aaPredicted RBP12.41□□□□□ -0.42
ZNF548-201ENST00000336128 PFDN6O15212 129 aa12.41□□□□□ -0.42
ZNF548-201ENST00000336128 BNIP3LO60238 219 aa12.41□□□□□ -0.42
ZNF548-201ENST00000336128 NPHS1O60500 1241 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms