RNA–Protein interactions for RNA: ENST00000335387.9

RC3H2-201, Transcript of ring finger and CCCH-type domains 2, humanhuman

TSL 1 (best) BASIC

Gene RC3H2, Length 3,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H2-201ENST00000335387 RGMBQ6NW40 437 aa13.38□□□□□ -0.27
RC3H2-201ENST00000335387 SPRED1Q7Z699 444 aa13.38□□□□□ -0.27
RC3H2-201ENST00000335387 HERC6Q8IVU3 1022 aa13.38□□□□□ -0.27
RC3H2-201ENST00000335387 PCYOX1LQ8NBM8 494 aa13.38□□□□□ -0.27
RC3H2-201ENST00000335387 PPP1R36Q96LQ0 422 aa13.38□□□□□ -0.27
RC3H2-201ENST00000335387 NUSAP1Q9BXS6 441 aaKnown RBP13.38□□□□□ -0.27
RC3H2-201ENST00000335387 SIK2Q9H0K1 926 aa13.38□□□□□ -0.27
RC3H2-201ENST00000335387 PCDHA9Q9Y5H5 950 aa13.38□□□□□ -0.27
RC3H2-201ENST00000335387 MYADML2A6NDP7 307 aa13.38□□□□□ -0.27
RC3H2-201ENST00000335387 CFLARO15519 480 aa13.38□□□□□ -0.27
RC3H2-201ENST00000335387 HNRNPRO43390 633 aaKnown RBP13.38□□□□□ -0.27
RC3H2-201ENST00000335387 CDK14O94921 469 aa13.38□□□□□ -0.27
RC3H2-201ENST00000335387 ARSDP51689 593 aa13.38□□□□□ -0.27
RC3H2-201ENST00000335387 SH3BP2P78314 561 aa13.38□□□□□ -0.27
RC3H2-201ENST00000335387 SERINC3Q13530 473 aa13.38□□□□□ -0.27
RC3H2-201ENST00000335387 XKR7Q5GH72 579 aa13.38□□□□□ -0.27
RC3H2-201ENST00000335387 RETREG3Q86VR2 466 aa13.38□□□□□ -0.27
RC3H2-201ENST00000335387 SPATA2LQ8IUW3 424 aaPredicted RBP13.38□□□□□ -0.27
RC3H2-201ENST00000335387 CHCHD4Q8N4Q1 142 aa13.38□□□□□ -0.27
RC3H2-201ENST00000335387 TRPV1Q8NER1 839 aa13.38□□□□□ -0.27
RC3H2-201ENST00000335387 C3orf30Q96M34 536 aa13.38□□□□□ -0.27
RC3H2-201ENST00000335387 BIRC8Q96P09 236 aa13.38□□□□□ -0.27
RC3H2-201ENST00000335387 EFHD1Q9BUP0 239 aa13.38□□□□□ -0.27
RC3H2-201ENST00000335387 BRINP2Q9C0B6 783 aa13.38□□□□□ -0.27
RC3H2-201ENST00000335387 DERL2Q9GZP9 239 aa13.38□□□□□ -0.27
RC3H2-201ENST00000335387 ACTR3BQ9P1U1 418 aa13.38□□□□□ -0.27
RC3H2-201ENST00000335387 CIDEBQ9UHD4 219 aa13.38□□□□□ -0.27
RC3H2-201ENST00000335387 HTRA2O43464 458 aaPredicted RBP13.37□□□□□ -0.27
RC3H2-201ENST00000335387 NPPAP01160 153 aa13.37□□□□□ -0.27
RC3H2-201ENST00000335387 SLC10A3P09131 477 aa13.37□□□□□ -0.27
RC3H2-201ENST00000335387 CDH2P19022 906 aaPredicted RBP13.37□□□□□ -0.27
RC3H2-201ENST00000335387 MYF6P23409 242 aa13.37□□□□□ -0.27
RC3H2-201ENST00000335387 SLC10A7Q0GE19 358 aa13.37□□□□□ -0.27
RC3H2-201ENST00000335387 TRIM71Q2Q1W2 868 aaKnown RBP13.37□□□□□ -0.27
RC3H2-201ENST00000335387 EP400NLQ6ZTU2 488 aa13.37□□□□□ -0.27
RC3H2-201ENST00000335387 LRTOMTQ8WZ04 291 aa13.37□□□□□ -0.27
RC3H2-201ENST00000335387 BTN2A3PQ96KV6 586 aa13.37□□□□□ -0.27
RC3H2-201ENST00000335387 AARSD1Q9BTE6 412 aaKnown RBP13.37□□□□□ -0.27
RC3H2-201ENST00000335387 AKTIPQ9H8T0 292 aa13.37□□□□□ -0.27
RC3H2-201ENST00000335387 MARCH4Q9P2E8 410 aaPredicted RBP13.37□□□□□ -0.27
RC3H2-201ENST00000335387 TXNDC9O14530 226 aa13.37□□□□□ -0.27
RC3H2-201ENST00000335387 STX16O14662 325 aa13.37□□□□□ -0.27
RC3H2-201ENST00000335387 PRAMEF11O60813 436 aa13.37□□□□□ -0.27
RC3H2-201ENST00000335387 KERAO60938 352 aa13.37□□□□□ -0.27
RC3H2-201ENST00000335387 RPP40O75818 363 aaKnown RBP13.37□□□□□ -0.27
RC3H2-201ENST00000335387 B3GAT3O94766 335 aa13.37□□□□□ -0.27
RC3H2-201ENST00000335387 TMCC1O94876 653 aa13.37□□□□□ -0.27
RC3H2-201ENST00000335387 PGM3O95394 542 aa13.37□□□□□ -0.27
RC3H2-201ENST00000335387 RPS17P08708 135 aaKnown RBP13.37□□□□□ -0.27
RC3H2-201ENST00000335387 HAPLN1P10915 354 aaPredicted RBP13.37□□□□□ -0.27
RC3H2-201ENST00000335387 CYBAP13498 195 aa13.37□□□□□ -0.27
RC3H2-201ENST00000335387 CD86P42081 329 aa13.37□□□□□ -0.27
RC3H2-201ENST00000335387 SETMARQ53H47 684 aaPredicted RBP13.37□□□□□ -0.27
RC3H2-201ENST00000335387 PRR23BQ6ZRT6 265 aa13.37□□□□□ -0.27
RC3H2-201ENST00000335387 SPATA19Q7Z5L4 167 aa13.37□□□□□ -0.27
RC3H2-201ENST00000335387 COLGALT2Q8IYK4 626 aa13.37□□□□□ -0.27
RC3H2-201ENST00000335387 PCDH20Q8N6Y1 951 aaKnown RBP13.37□□□□□ -0.27
RC3H2-201ENST00000335387 KIAA1191Q96A73 305 aa13.37□□□□□ -0.27
RC3H2-201ENST00000335387 CNBD2Q96M20 576 aa13.37□□□□□ -0.27
RC3H2-201ENST00000335387 CCT7Q99832 543 aa13.37□□□□□ -0.27
RC3H2-201ENST00000335387 TRIM54Q9BYV2 358 aa13.37□□□□□ -0.27
RC3H2-201ENST00000335387 TRIM15Q9C019 465 aa13.37□□□□□ -0.27
RC3H2-201ENST00000335387 OLA1Q9NTK5 396 aaKnown RBP13.37□□□□□ -0.27
RC3H2-201ENST00000335387 ADA2Q9NZK5 511 aa13.37□□□□□ -0.27
RC3H2-201ENST00000335387 MPP6Q9NZW5 540 aa13.37□□□□□ -0.27
RC3H2-201ENST00000335387 HSFX1Q9UBD0 423 aa13.37□□□□□ -0.27
RC3H2-201ENST00000335387 PADI3Q9ULW8 664 aa13.37□□□□□ -0.27
RC3H2-201ENST00000335387 MED16Q9Y2X0 877 aa13.37□□□□□ -0.27
RC3H2-201ENST00000335387 SCN8AQ9UQD0 1980 aa13.37□□□□□ -0.27
RC3H2-201ENST00000335387 CCDC78A2IDD5 438 aa13.36□□□□□ -0.27
RC3H2-201ENST00000335387 J3KR12 359 aa13.36□□□□□ -0.27
RC3H2-201ENST00000335387 SPATA31D3P0C874 917 aa13.36□□□□□ -0.27
RC3H2-201ENST00000335387 CDK9P50750 372 aaKnown RBP13.36□□□□□ -0.27
RC3H2-201ENST00000335387 MRPL58Q14197 206 aaKnown RBP13.36□□□□□ -0.27
RC3H2-201ENST00000335387 BLOC1S3Q6QNY0 202 aa13.36□□□□□ -0.27
RC3H2-201ENST00000335387 RNF165Q6ZSG1 346 aa13.36□□□□□ -0.27
RC3H2-201ENST00000335387 SPATA31D4Q6ZUB0 917 aa13.36□□□□□ -0.27
RC3H2-201ENST00000335387 DHFR2Q86XF0 187 aa13.36□□□□□ -0.27
RC3H2-201ENST00000335387 BRSK1Q8TDC3 778 aa13.36□□□□□ -0.27
RC3H2-201ENST00000335387 TCF12Q99081 682 aa13.36□□□□□ -0.27
RC3H2-201ENST00000335387 PCDHAC1Q9H158 963 aa13.36□□□□□ -0.27
RC3H2-201ENST00000335387 GPR45Q9Y5Y3 372 aa13.36□□□□□ -0.27
RC3H2-201ENST00000335387 UTRNP46939 3433 aa13.36□□□□□ -0.27
RC3H2-201ENST00000335387 TCRBV5S2A0A599 114 aa13.36□□□□□ -0.27
RC3H2-201ENST00000335387 NME4O00746 187 aa13.36□□□□□ -0.27
RC3H2-201ENST00000335387 STC1P52823 247 aa13.36□□□□□ -0.27
RC3H2-201ENST00000335387 ATP6AP1Q15904 470 aa13.36□□□□□ -0.27
RC3H2-201ENST00000335387 NOMO2Q5JPE7 1267 aa13.36□□□□□ -0.27
RC3H2-201ENST00000335387 GPR158Q5T848 1215 aa13.36□□□□□ -0.27
RC3H2-201ENST00000335387 ATP6V0D2Q8N8Y2 350 aa13.36□□□□□ -0.27
RC3H2-201ENST00000335387 EME1Q96AY2 570 aa13.36□□□□□ -0.27
RC3H2-201ENST00000335387 MYRFLQ96LU7 910 aa13.36□□□□□ -0.27
RC3H2-201ENST00000335387 TUBB1Q9H4B7 451 aa13.36□□□□□ -0.27
RC3H2-201ENST00000335387 NLE1Q9NVX2 485 aaPredicted RBP13.36□□□□□ -0.27
RC3H2-201ENST00000335387 SLC8A2Q9UPR5 921 aa13.36□□□□□ -0.27
RC3H2-201ENST00000335387 GPIP06744 558 aa13.36□□□□□ -0.27
RC3H2-201ENST00000335387 ZDHHC11BP0C7U3 371 aa13.36□□□□□ -0.27
RC3H2-201ENST00000335387 ATP6V1B2P21281 511 aa13.36□□□□□ -0.27
RC3H2-201ENST00000335387 MSX2P35548 267 aaPredicted RBP13.36□□□□□ -0.27
RC3H2-201ENST00000335387 ZNF140P52738 457 aaPredicted RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms