RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 HDAC10Q969S8 669 aa21.49■■□□□ 1.03
TPM1-204ENST00000334895 CERS2Q96G23 380 aa21.49■■□□□ 1.03
TPM1-204ENST00000334895 CDKN2AIPNLQ96HQ2 116 aa21.49■■□□□ 1.03
TPM1-204ENST00000334895 LRFN3Q9BTN0 628 aa21.49■■□□□ 1.03
TPM1-204ENST00000334895 WRAP53Q9BUR4 548 aaKnown RBP21.49■■□□□ 1.03
TPM1-204ENST00000334895 FKBPLQ9UIM3 349 aa21.49■■□□□ 1.03
TPM1-204ENST00000334895 RABGEF1Q9UJ41 708 aa21.49■■□□□ 1.03
TPM1-204ENST00000334895 RPP40O75818 363 aaKnown RBP21.48■■□□□ 1.03
TPM1-204ENST00000334895 VAPBO95292 243 aa21.48■■□□□ 1.03
TPM1-204ENST00000334895 BPIP17213 487 aa21.48■■□□□ 1.03
TPM1-204ENST00000334895 LIG3P49916 1009 aa21.48■■□□□ 1.03
TPM1-204ENST00000334895 EFTUD2Q15029 972 aaKnown RBP eCLIP21.48■■□□□ 1.031e-5■■■□□ 16.7
TPM1-204ENST00000334895 CYS1Q717R9 158 aa21.48■■□□□ 1.03
TPM1-204ENST00000334895 GANCQ8TET4 914 aa21.48■■□□□ 1.03
TPM1-204ENST00000334895 USP36Q9P275 1121 aaKnown RBP21.48■■□□□ 1.03
TPM1-204ENST00000334895 FZD4Q9ULV1 537 aa21.48■■□□□ 1.03
TPM1-204ENST00000334895 CACNA1IQ9P0X4 2223 aa21.48■■□□□ 1.03
TPM1-204ENST00000334895 CCDC162PA2VCL2 907 aa21.47■■□□□ 1.03
TPM1-204ENST00000334895 OR51F1A6NGY5 319 aa21.47■■□□□ 1.03
TPM1-204ENST00000334895 GOLGA8CPA6NN73 597 aa21.47■■□□□ 1.03
TPM1-204ENST00000334895 GOLGA8KD6RF30 607 aa21.47■■□□□ 1.03
TPM1-204ENST00000334895 H0Y858 1186 aa21.47■■□□□ 1.03
TPM1-204ENST00000334895 GOLGA8TH3BQL2 631 aa21.47■■□□□ 1.03
TPM1-204ENST00000334895 GAPDHSO14556 408 aaPredicted RBP21.47■■□□□ 1.03
TPM1-204ENST00000334895 PLRG1O43660 514 aaKnown RBP21.47■■□□□ 1.03
TPM1-204ENST00000334895 NUDT17P0C025 328 aa21.47■■□□□ 1.03
TPM1-204ENST00000334895 ERVK-10P10266 1014 aa21.47■■□□□ 1.03
TPM1-204ENST00000334895 ACADMP11310 421 aa21.47■■□□□ 1.03
TPM1-204ENST00000334895 PHBP35232 272 aa21.47■■□□□ 1.03
TPM1-204ENST00000334895 ADPRHP54922 357 aa21.47■■□□□ 1.03
TPM1-204ENST00000334895 LONRF1Q17RB8 773 aa21.47■■□□□ 1.03
TPM1-204ENST00000334895 RASSF3Q86WH2 238 aa21.47■■□□□ 1.03
TPM1-204ENST00000334895 IQCKQ8N0W5 287 aa21.47■■□□□ 1.03
TPM1-204ENST00000334895 TMEM105Q8N8V8 129 aa21.47■■□□□ 1.03
TPM1-204ENST00000334895 OR2W6PQ8NHA6 318 aa21.47■■□□□ 1.03
TPM1-204ENST00000334895 C19orf43Q9BQ61 176 aa21.47■■□□□ 1.03
TPM1-204ENST00000334895 ACSS3Q9H6R3 686 aa21.47■■□□□ 1.03
TPM1-204ENST00000334895 ITM2CQ9NQX7 267 aa21.47■■□□□ 1.03
TPM1-204ENST00000334895 BCCIPQ9P287 314 aaKnown RBP eCLIP21.47■■□□□ 1.03
TPM1-204ENST00000334895 SLC17A6Q9P2U8 582 aa21.47■■□□□ 1.03
TPM1-204ENST00000334895 PKP3Q9Y446 797 aa21.47■■□□□ 1.03
TPM1-204ENST00000334895 NFS1Q9Y697 457 aa21.47■■□□□ 1.03
TPM1-204ENST00000334895 A0A087WUV0 522 aaPredicted RBP21.47■■□□□ 1.03
TPM1-204ENST00000334895 CXorf49A8MYA2 514 aaPredicted RBP21.47■■□□□ 1.03
TPM1-204ENST00000334895 SLC7A4O43246 635 aa21.47■■□□□ 1.03
TPM1-204ENST00000334895 MMP20O60882 483 aa21.47■■□□□ 1.03
TPM1-204ENST00000334895 ELFN1P0C7U0 828 aa21.47■■□□□ 1.03
TPM1-204ENST00000334895 STX2P32856 288 aa21.47■■□□□ 1.03
TPM1-204ENST00000334895 SPINT3P49223 89 aa21.47■■□□□ 1.03
TPM1-204ENST00000334895 CLCN5P51795 746 aa21.47■■□□□ 1.03
TPM1-204ENST00000334895 XIAPP98170 497 aa21.47■■□□□ 1.03
TPM1-204ENST00000334895 TECPR1Q7Z6L1 1165 aa21.47■■□□□ 1.03
TPM1-204ENST00000334895 KBTBD6Q86V97 674 aa21.47■■□□□ 1.03
TPM1-204ENST00000334895 PGBD3Q8N328 593 aa21.47■■□□□ 1.03
TPM1-204ENST00000334895 GPR26Q8NDV2 337 aa21.47■■□□□ 1.03
TPM1-204ENST00000334895 IER2Q9BTL4 223 aa21.47■■□□□ 1.03
TPM1-204ENST00000334895 C20orf96Q9NUD7 363 aaPredicted RBP21.47■■□□□ 1.03
TPM1-204ENST00000334895 PLAAQ9Y263 795 aa21.47■■□□□ 1.03
TPM1-204ENST00000334895 PLXNA2O75051 1894 aa21.46■■□□□ 1.03
TPM1-204ENST00000334895 FAM159BA6NKW6 160 aa21.46■■□□□ 1.03
TPM1-204ENST00000334895 H7C0S8 307 aa21.46■■□□□ 1.03
TPM1-204ENST00000334895 PSMD11O00231 422 aa21.46■■□□□ 1.03
TPM1-204ENST00000334895 NEMP1O14524 444 aa21.46■■□□□ 1.03
TPM1-204ENST00000334895 IGLV3-19P01714 112 aa21.46■■□□□ 1.03
TPM1-204ENST00000334895 C6P13671 934 aa21.46■■□□□ 1.03
TPM1-204ENST00000334895 PAMP19021 973 aa21.46■■□□□ 1.03
TPM1-204ENST00000334895 ETV3P41162 512 aa21.46■■□□□ 1.03
TPM1-204ENST00000334895 CCDC15Q0P6D6 951 aa21.46■■□□□ 1.03
TPM1-204ENST00000334895 PEX6Q13608 980 aa21.46■■□□□ 1.03
TPM1-204ENST00000334895 KBTBD12Q3ZCT8 623 aa21.46■■□□□ 1.03
TPM1-204ENST00000334895 Q6ZVL8 140 aa21.46■■□□□ 1.03
TPM1-204ENST00000334895 FAM124AQ86V42 546 aa21.46■■□□□ 1.03
TPM1-204ENST00000334895 KCNMB4Q86W47 210 aa21.46■■□□□ 1.03
TPM1-204ENST00000334895 OR14C36Q8NHC7 312 aa21.46■■□□□ 1.03
TPM1-204ENST00000334895 COQ10AQ96MF6 247 aa21.46■■□□□ 1.03
TPM1-204ENST00000334895 IL26Q9NPH9 171 aa21.46■■□□□ 1.03
TPM1-204ENST00000334895 COQ6Q9Y2Z9 468 aa21.46■■□□□ 1.03
TPM1-204ENST00000334895 K7ESF4 209 aa21.45■■□□□ 1.02
TPM1-204ENST00000334895 TSPAN6O43657 245 aa21.45■■□□□ 1.02
TPM1-204ENST00000334895 SASH3O75995 380 aa21.45■■□□□ 1.02
TPM1-204ENST00000334895 APBB3O95704 486 aa21.45■■□□□ 1.02
TPM1-204ENST00000334895 GOT2P00505 430 aaKnown RBP21.45■■□□□ 1.02
TPM1-204ENST00000334895 HADHAP40939 763 aa21.45■■□□□ 1.02
TPM1-204ENST00000334895 MAGEA9P43362 315 aa21.45■■□□□ 1.02
TPM1-204ENST00000334895 MGAT5Q09328 741 aa21.45■■□□□ 1.02
TPM1-204ENST00000334895 HSP90AA5PQ58FG0 334 aa21.45■■□□□ 1.02
TPM1-204ENST00000334895 PDPK2PQ6A1A2 396 aa21.45■■□□□ 1.02
TPM1-204ENST00000334895 MAMSTRQ6ZN01 415 aa21.45■■□□□ 1.02
TPM1-204ENST00000334895 CD84Q9UIB8 345 aa21.45■■□□□ 1.02
TPM1-204ENST00000334895 NCKAP1Q9Y2A7 1128 aa21.45■■□□□ 1.02
TPM1-204ENST00000334895 FNDC3AQ9Y2H6 1198 aaKnown RBP21.45■■□□□ 1.02
TPM1-204ENST00000334895 F7P08709 466 aaPredicted RBP21.44■■□□□ 1.02
TPM1-204ENST00000334895 PRSS56P0CW18 603 aa21.44■■□□□ 1.02
TPM1-204ENST00000334895 ACSL1P33121 698 aa21.44■■□□□ 1.02
TPM1-204ENST00000334895 CXCL12P48061 93 aa21.44■■□□□ 1.02
TPM1-204ENST00000334895 PXNP49023 591 aaPredicted RBP21.44■■□□□ 1.02
TPM1-204ENST00000334895 PRAMEP78395 509 aa21.44■■□□□ 1.02
TPM1-204ENST00000334895 CREB5Q02930 508 aa21.44■■□□□ 1.02
TPM1-204ENST00000334895 SEL1L3Q68CR1 1132 aa21.44■■□□□ 1.02
TPM1-204ENST00000334895 ZNF449Q6P9G9 518 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms