RNA–Protein interactions for RNA: ENST00000334389.5

LINC00643-201, long intergenic non-protein coding RNA 643, humanhuman

TSL 2 BASIC

Gene LINC00643, Length 3,247 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-201ENST00000334389 ASAH1Q13510 395 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 TFDP2Q14188 446 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 ZNF234Q14588 700 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 OVOS1Q6IE37 1185 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 ERAP2Q6P179 960 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 PRMT9Q6P2P2 845 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 CLEC9AQ6UXN8 241 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 NSMFQ6X4W1 530 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 SPOCD1Q6ZMY3 1216 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 LINC00336Q6ZUF6 198 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 KRT77Q7Z794 578 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 MRGPRGQ86SM5 289 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 AACSQ86V21 672 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 CAND1Q86VP6 1230 aaKnown RBP1.55□□□□□ -2.16
LINC00643-201ENST00000334389 P2RY8Q86VZ1 359 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 LACC1Q8IV20 430 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 PHACTR4Q8IZ21 702 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 C12orf76Q8N812 135 aaPredicted RBP1.55□□□□□ -2.16
LINC00643-201ENST00000334389 NAXEQ8NCW5 288 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 CPA5Q8WXQ8 436 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 SSH1Q8WYL5 1049 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 OR8D1Q8WZ84 308 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 WASF1Q92558 559 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 ALKBH8Q96BT7 664 aaKnown RBP1.55□□□□□ -2.16
LINC00643-201ENST00000334389 TCEAL4Q96EI5 215 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 ZNF274Q96GC6 653 aaPredicted RBP1.55□□□□□ -2.16
LINC00643-201ENST00000334389 ZNF514Q96K75 400 aaPredicted RBP1.55□□□□□ -2.16
LINC00643-201ENST00000334389 COQ10AQ96MF6 247 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 ACAP3Q96P50 834 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 OSMRQ99650 979 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 LRRC27Q9C0I9 530 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 LHPPQ9H008 270 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 UGT1A10Q9HAW8 530 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 METTL14Q9HCE5 456 aaKnown RBP1.55□□□□□ -2.16
LINC00643-201ENST00000334389 VAT1LQ9HCJ6 419 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 NPHS2Q9NP85 383 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 MMP25Q9NPA2 562 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 FGF21Q9NSA1 209 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 LNPEPQ9UIQ6 1025 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 MGAT4BQ9UQ53 548 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 PIN4Q9Y237 131 aaKnown RBP1.55□□□□□ -2.16
LINC00643-201ENST00000334389 B3GALT1Q9Y5Z6 326 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 ALG6Q9Y672 507 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 FAT1Q14517 4588 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 CHD6Q8TD26 2715 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 A0A1B0GVT2 93 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 NPIPB15A6NHN6 443 aaPredicted RBP1.55□□□□□ -2.16
LINC00643-201ENST00000334389 ZNF233A6NK53 670 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 TTLL8A6PVC2 850 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 H3BRJ5 948 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 PRRG1O14668 218 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 GNB5O14775 395 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 IKBKBO14920 756 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 DUX1O43812 170 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 LILRA1O75019 489 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 SEMA7AO75326 666 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 TSPAN12O95859 305 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 GOT2P00505 430 aaKnown RBP1.55□□□□□ -2.16
LINC00643-201ENST00000334389 CYBBP04839 570 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 MYCLP1P12525 358 aaPredicted RBP1.55□□□□□ -2.16
LINC00643-201ENST00000334389 HNF1AP20823 631 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 HRH2P25021 359 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 CHATP28329 748 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 CDH5P33151 784 aaPredicted RBP1.55□□□□□ -2.16
LINC00643-201ENST00000334389 TUBB4BP68371 445 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 CCDC173Q0VFZ6 552 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 PTP4A2Q12974 167 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 GAB1Q13480 694 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 TUBB2AQ13885 445 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 SPCS2Q15005 226 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 PSMD6Q15008 389 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 BCL7AQ4VC05 210 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 KLHL22Q53GT1 634 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 TBCELQ5QJ74 424 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 SPOUT1Q5T280 376 aaKnown RBP1.55□□□□□ -2.16
LINC00643-201ENST00000334389 C6orf52Q5T4I8 152 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 HAUS3Q68CZ6 603 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 BRAT1Q6PJG6 821 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 TSSK4Q6SA08 328 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 SCARA5Q6ZMJ2 495 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 FILIP1Q7Z7B0 1213 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 LRRTM3Q86VH5 581 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 RHPN2Q8IUC4 686 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 PLXDC1Q8IUK5 500 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 GPIHBP1Q8IV16 184 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 SLC22A18ASQ8N1D0 253 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 GHDCQ8N2G8 530 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 TMEM156Q8N614 296 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 LILRA3Q8N6C8 439 aaPredicted RBP1.55□□□□□ -2.16
LINC00643-201ENST00000334389 ALLCQ8N6M5 410 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 AOPEPQ8N6M6 819 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 GOLGA6L1Q8N7Z2 621 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 GOLM1Q8NBJ4 401 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 FBXO15Q8NCQ5 510 aaPredicted RBP1.55□□□□□ -2.16
LINC00643-201ENST00000334389 GOT1L1Q8NHS2 421 aaPredicted RBP1.55□□□□□ -2.16
LINC00643-201ENST00000334389 TMEM106AQ96A25 262 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 DYNLL2Q96FJ2 89 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 AHCYL2Q96HN2 611 aaKnown RBP1.55□□□□□ -2.16
LINC00643-201ENST00000334389 HSFY1Q96LI6 401 aa1.55□□□□□ -2.16
LINC00643-201ENST00000334389 C9orf72Q96LT7 481 aa1.55□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms