RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 STON2Q8WXE9 905 aa12.32□□□□□ -0.44
VPS33B-201ENST00000333371 IRGQQ8WZA9 623 aa12.32□□□□□ -0.44
VPS33B-201ENST00000333371 OSBPL11Q9BXB4 747 aa12.32□□□□□ -0.44
VPS33B-201ENST00000333371 UPF3AQ9H1J1 476 aaKnown RBP12.32□□□□□ -0.44
VPS33B-201ENST00000333371 MID1IP1Q9NPA3 183 aa12.32□□□□□ -0.44
VPS33B-201ENST00000333371 RGS18Q9NS28 235 aa12.32□□□□□ -0.44
VPS33B-201ENST00000333371 GALNT8Q9NY28 637 aa12.32□□□□□ -0.44
VPS33B-201ENST00000333371 UXTQ9UBK9 157 aaPredicted RBP12.32□□□□□ -0.44
VPS33B-201ENST00000333371 CNOT11Q9UKZ1 510 aaKnown RBP12.32□□□□□ -0.44
VPS33B-201ENST00000333371 ARL5AQ9Y689 179 aa12.32□□□□□ -0.44
VPS33B-201ENST00000333371 LAMA2P24043 3122 aaKnown RBP12.32□□□□□ -0.44
VPS33B-201ENST00000333371 FAM155AB1AL88 458 aaPredicted RBP12.32□□□□□ -0.44
VPS33B-201ENST00000333371 H3BMM5 538 aa12.32□□□□□ -0.44
VPS33B-201ENST00000333371 MGEA5O60502 916 aa12.32□□□□□ -0.44
VPS33B-201ENST00000333371 FOXD2O60548 495 aaPredicted RBP12.32□□□□□ -0.44
VPS33B-201ENST00000333371 ASGR1P07306 291 aa12.32□□□□□ -0.44
VPS33B-201ENST00000333371 RBP1P09455 135 aa12.32□□□□□ -0.44
VPS33B-201ENST00000333371 LINC00032P0C843 101 aa12.32□□□□□ -0.44
VPS33B-201ENST00000333371 DNAJB1P25685 340 aa12.32□□□□□ -0.44
VPS33B-201ENST00000333371 HOXC13P31276 330 aa12.32□□□□□ -0.44
VPS33B-201ENST00000333371 CD52P31358 61 aa12.32□□□□□ -0.44
VPS33B-201ENST00000333371 GALK1P51570 392 aa12.32□□□□□ -0.44
VPS33B-201ENST00000333371 ZNF135P52742 658 aaPredicted RBP12.32□□□□□ -0.44
VPS33B-201ENST00000333371 TIAL1Q01085 375 aaKnown RBP eCLIP12.32□□□□□ -0.44
VPS33B-201ENST00000333371 PSMD5Q16401 504 aa12.32□□□□□ -0.44
VPS33B-201ENST00000333371 MAP7D1Q3KQU3 841 aa12.32□□□□□ -0.44
VPS33B-201ENST00000333371 NHSL2Q5HYW2 709 aa12.32□□□□□ -0.44
VPS33B-201ENST00000333371 SIRPB2Q5JXA9 342 aa12.32□□□□□ -0.44
VPS33B-201ENST00000333371 PGBD5Q8N414 524 aa12.32□□□□□ -0.44
VPS33B-201ENST00000333371 DDI1Q8WTU0 396 aa12.32□□□□□ -0.44
VPS33B-201ENST00000333371 PTCD2Q8WV60 388 aaKnown RBP12.32□□□□□ -0.44
VPS33B-201ENST00000333371 DTNBP1Q96EV8 351 aa12.32□□□□□ -0.44
VPS33B-201ENST00000333371 IMP4Q96G21 291 aaKnown RBP12.32□□□□□ -0.44
VPS33B-201ENST00000333371 FAR2Q96K12 515 aa12.32□□□□□ -0.44
VPS33B-201ENST00000333371 ZIC5Q96T25 663 aa12.32□□□□□ -0.44
VPS33B-201ENST00000333371 MUC3BQ9H195 1237 aa12.32□□□□□ -0.44
VPS33B-201ENST00000333371 SLC25A51Q9H1U9 297 aa12.32□□□□□ -0.44
VPS33B-201ENST00000333371 TUBB1Q9H4B7 451 aa12.32□□□□□ -0.44
VPS33B-201ENST00000333371 SOX17Q9H6I2 414 aaPredicted RBP12.32□□□□□ -0.44
VPS33B-201ENST00000333371 SMOXQ9NWM0 555 aa12.32□□□□□ -0.44
VPS33B-201ENST00000333371 USP22Q9UPT9 525 aa12.32□□□□□ -0.44
VPS33B-201ENST00000333371 DLGAP1O14490 977 aa12.31□□□□□ -0.44
VPS33B-201ENST00000333371 MAGEB3O15480 346 aa12.31□□□□□ -0.44
VPS33B-201ENST00000333371 FGF10O15520 208 aaPredicted RBP12.31□□□□□ -0.44
VPS33B-201ENST00000333371 TBX18O95935 607 aa12.31□□□□□ -0.44
VPS33B-201ENST00000333371 RPLP2P05387 115 aaKnown RBP12.31□□□□□ -0.44
VPS33B-201ENST00000333371 MTHFD1P11586 935 aaKnown RBP12.31□□□□□ -0.44
VPS33B-201ENST00000333371 ODC1P11926 461 aa12.31□□□□□ -0.44
VPS33B-201ENST00000333371 ZNF23P17027 643 aa12.31□□□□□ -0.44
VPS33B-201ENST00000333371 CTBSQ01459 385 aa12.31□□□□□ -0.44
VPS33B-201ENST00000333371 CREB5Q02930 508 aa12.31□□□□□ -0.44
VPS33B-201ENST00000333371 PRKCZQ05513 592 aa12.31□□□□□ -0.44
VPS33B-201ENST00000333371 KCNA10Q16322 511 aa12.31□□□□□ -0.44
VPS33B-201ENST00000333371 TBCELQ5QJ74 424 aa12.31□□□□□ -0.44
VPS33B-201ENST00000333371 SCIMPQ6UWF3 145 aa12.31□□□□□ -0.44
VPS33B-201ENST00000333371 KIAA0408Q6ZU52 694 aa12.31□□□□□ -0.44
VPS33B-201ENST00000333371 LPCAT2Q7L5N7 544 aa12.31□□□□□ -0.44
VPS33B-201ENST00000333371 AFAP1L2Q8N4X5 818 aa12.31□□□□□ -0.44
VPS33B-201ENST00000333371 OR13C4Q8NGS5 318 aa12.31□□□□□ -0.44
VPS33B-201ENST00000333371 OR2T34Q8NGX1 318 aa12.31□□□□□ -0.44
VPS33B-201ENST00000333371 OR2T3Q8NH03 318 aa12.31□□□□□ -0.44
VPS33B-201ENST00000333371 TRPC4APQ8TEL6 797 aa12.31□□□□□ -0.44
VPS33B-201ENST00000333371 PBXIP1Q96AQ6 731 aa12.31□□□□□ -0.44
VPS33B-201ENST00000333371 RMND5BQ96G75 393 aaPredicted RBP12.31□□□□□ -0.44
VPS33B-201ENST00000333371 PKMYT1Q99640 499 aa12.31□□□□□ -0.44
VPS33B-201ENST00000333371 ACBD6Q9BR61 282 aa12.31□□□□□ -0.44
VPS33B-201ENST00000333371 PRKD2Q9BZL6 878 aa12.31□□□□□ -0.44
VPS33B-201ENST00000333371 ABCC13Q9NSE7 274 aa12.31□□□□□ -0.44
VPS33B-201ENST00000333371 TBC1D13Q9NVG8 400 aa12.31□□□□□ -0.44
VPS33B-201ENST00000333371 IRAK4Q9NWZ3 460 aa12.31□□□□□ -0.44
VPS33B-201ENST00000333371 RHBDL2Q9NX52 303 aa12.31□□□□□ -0.44
VPS33B-201ENST00000333371 PADI3Q9ULW8 664 aa12.31□□□□□ -0.44
VPS33B-201ENST00000333371 MYRFQ9Y2G1 1151 aa12.31□□□□□ -0.44
VPS33B-201ENST00000333371 ACTL7AQ9Y615 435 aa12.31□□□□□ -0.44
VPS33B-201ENST00000333371 V9GYQ6 96 aa12.31□□□□□ -0.44
VPS33B-201ENST00000333371 RPL9P32969 192 aaKnown RBP12.31□□□□□ -0.44
VPS33B-201ENST00000333371 DIO3P55073 304 aa12.31□□□□□ -0.44
VPS33B-201ENST00000333371 STX1BP61266 288 aa12.31□□□□□ -0.44
VPS33B-201ENST00000333371 TRAP1Q12931 704 aaKnown RBP12.31□□□□□ -0.44
VPS33B-201ENST00000333371 GALNT3Q14435 633 aa12.31□□□□□ -0.44
VPS33B-201ENST00000333371 TMEM259Q4ZIN3 620 aa12.31□□□□□ -0.44
VPS33B-201ENST00000333371 AFMIDQ63HM1 303 aa12.31□□□□□ -0.44
VPS33B-201ENST00000333371 OVOS1Q6IE37 1185 aa12.31□□□□□ -0.44
VPS33B-201ENST00000333371 FAM45BPQ6NSW5 357 aa12.31□□□□□ -0.44
VPS33B-201ENST00000333371 FAM45AQ8TCE6 357 aa12.31□□□□□ -0.44
VPS33B-201ENST00000333371 BLOC1S5Q8TDH9 187 aa12.31□□□□□ -0.44
VPS33B-201ENST00000333371 GAB3Q8WWW8 586 aa12.31□□□□□ -0.44
VPS33B-201ENST00000333371 VPS33AQ96AX1 596 aa12.31□□□□□ -0.44
VPS33B-201ENST00000333371 CCDC126Q96EE4 140 aa12.31□□□□□ -0.44
VPS33B-201ENST00000333371 SMOC2Q9H3U7 446 aa12.31□□□□□ -0.44
VPS33B-201ENST00000333371 PIF1Q9H611 641 aa12.31□□□□□ -0.44
VPS33B-201ENST00000333371 CMTM6Q9NX76 183 aa12.31□□□□□ -0.44
VPS33B-201ENST00000333371 RSL24D1Q9UHA3 163 aaKnown RBP12.31□□□□□ -0.44
VPS33B-201ENST00000333371 TIMM22Q9Y584 194 aa12.31□□□□□ -0.44
VPS33B-201ENST00000333371 COL4A4P53420 1690 aaPredicted RBP12.31□□□□□ -0.44
VPS33B-201ENST00000333371 FXYD1O00168 92 aa12.3□□□□□ -0.44
VPS33B-201ENST00000333371 WISP3O95389 354 aaPredicted RBP12.3□□□□□ -0.44
VPS33B-201ENST00000333371 HMBSP08397 361 aa12.3□□□□□ -0.44
VPS33B-201ENST00000333371 NCK1P16333 377 aa12.3□□□□□ -0.44
VPS33B-201ENST00000333371 STT3AP46977 705 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms