RNA–Protein interactions for RNA: ENST00000333188.9

COPB2-201, Transcript of coatomer protein complex subunit beta 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB2, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-201ENST00000333188 OR9I1Q8NGQ6 314 aa9.03□□□□□ -0.96
COPB2-201ENST00000333188 WDR60Q8WVS4 1066 aa9.03□□□□□ -0.96
COPB2-201ENST00000333188 TUBGCP3Q96CW5 907 aa9.03□□□□□ -0.96
COPB2-201ENST00000333188 MYOCQ99972 504 aa9.03□□□□□ -0.96
COPB2-201ENST00000333188 TMEM175Q9BSA9 504 aa9.03□□□□□ -0.96
COPB2-201ENST00000333188 C2orf49Q9BVC5 232 aaPredicted RBP9.03□□□□□ -0.96
COPB2-201ENST00000333188 MAGEH1Q9H213 219 aa9.03□□□□□ -0.96
COPB2-201ENST00000333188 SIRPGQ9P1W8 387 aa9.03□□□□□ -0.96
COPB2-201ENST00000333188 NKX1-2Q9UD57 310 aaPredicted RBP9.03□□□□□ -0.96
COPB2-201ENST00000333188 TRMT6Q9UJA5 497 aaKnown RBP9.03□□□□□ -0.96
COPB2-201ENST00000333188 MOSPD1Q9UJG1 213 aa9.03□□□□□ -0.96
COPB2-201ENST00000333188 EME2A4GXA9 379 aaPredicted RBP9.02□□□□□ -0.97
COPB2-201ENST00000333188 LEFTY2O00292 366 aa9.02□□□□□ -0.97
COPB2-201ENST00000333188 ANP32DO95626 131 aa9.02□□□□□ -0.97
COPB2-201ENST00000333188 OAS1P00973 400 aaKnown RBP9.02□□□□□ -0.97
COPB2-201ENST00000333188 CA3P07451 260 aa9.02□□□□□ -0.97
COPB2-201ENST00000333188 LTA4HP09960 611 aaKnown RBP9.02□□□□□ -0.97
COPB2-201ENST00000333188 PTPN4P29074 926 aa9.02□□□□□ -0.97
COPB2-201ENST00000333188 DSG1Q02413 1049 aa9.02□□□□□ -0.97
COPB2-201ENST00000333188 LMAN2Q12907 356 aa9.02□□□□□ -0.97
COPB2-201ENST00000333188 CYTH1Q15438 398 aa9.02□□□□□ -0.97
COPB2-201ENST00000333188 PLA2G4EQ3MJ16 856 aa9.02□□□□□ -0.97
COPB2-201ENST00000333188 CCDC153Q494R4 210 aa9.02□□□□□ -0.97
COPB2-201ENST00000333188 KHDC1Q4VXA5 237 aaKnown RBP9.02□□□□□ -0.97
COPB2-201ENST00000333188 PABPC1LQ4VXU2 614 aaKnown RBP9.02□□□□□ -0.97
COPB2-201ENST00000333188 GIMAP7Q8NHV1 300 aa9.02□□□□□ -0.97
COPB2-201ENST00000333188 GANCQ8TET4 914 aa9.02□□□□□ -0.97
COPB2-201ENST00000333188 LENG8Q96PV6 779 aaPredicted RBP9.02□□□□□ -0.97
COPB2-201ENST00000333188 ACOX2Q99424 681 aa9.02□□□□□ -0.97
COPB2-201ENST00000333188 GPR22Q99680 433 aa9.02□□□□□ -0.97
COPB2-201ENST00000333188 NPAS2Q99743 824 aa9.02□□□□□ -0.97
COPB2-201ENST00000333188 MIPEPQ99797 713 aa9.02□□□□□ -0.97
COPB2-201ENST00000333188 C1orf50Q9BV19 199 aa9.02□□□□□ -0.97
COPB2-201ENST00000333188 PRKD2Q9BZL6 878 aa9.02□□□□□ -0.97
COPB2-201ENST00000333188 VPS45Q9NRW7 570 aa9.02□□□□□ -0.97
COPB2-201ENST00000333188 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.02□□□□□ -0.97
COPB2-201ENST00000333188 NUP214P35658 2090 aaPredicted RBP9.02□□□□□ -0.97
COPB2-201ENST00000333188 WASH3PC4AMC7 463 aa9.02□□□□□ -0.97
COPB2-201ENST00000333188 GRM6O15303 877 aa9.02□□□□□ -0.97
COPB2-201ENST00000333188 LDB2O43679 373 aa9.02□□□□□ -0.97
COPB2-201ENST00000333188 SMIM24O75264 130 aa9.02□□□□□ -0.97
COPB2-201ENST00000333188 LUC7L3O95232 432 aaKnown RBP9.02□□□□□ -0.97
COPB2-201ENST00000333188 PRAMEF1O95521 474 aa9.02□□□□□ -0.97
COPB2-201ENST00000333188 PEX11BO96011 259 aa9.02□□□□□ -0.97
COPB2-201ENST00000333188 COL6A1P12109 1028 aa9.02□□□□□ -0.97
COPB2-201ENST00000333188 LPOP22079 712 aaPredicted RBP9.02□□□□□ -0.97
COPB2-201ENST00000333188 ARCN1P48444 511 aaKnown RBP9.02□□□□□ -0.97
COPB2-201ENST00000333188 RPL14P50914 215 aaKnown RBP9.02□□□□□ -0.97
COPB2-201ENST00000333188 ZNF135P52742 658 aaPredicted RBP9.02□□□□□ -0.97
COPB2-201ENST00000333188 PRMT2P55345 433 aa9.02□□□□□ -0.97
COPB2-201ENST00000333188 DDX39BQ13838 428 aaKnown RBP9.02□□□□□ -0.97
COPB2-201ENST00000333188 FUT11Q495W5 492 aa9.02□□□□□ -0.97
COPB2-201ENST00000333188 AGKQ53H12 422 aa9.02□□□□□ -0.97
COPB2-201ENST00000333188 RAB44Q7Z6P3 723 aaPredicted RBP9.02□□□□□ -0.97
COPB2-201ENST00000333188 BRSK1Q8TDC3 778 aa9.02□□□□□ -0.97
COPB2-201ENST00000333188 SCAMP4Q969E2 229 aa9.02□□□□□ -0.97
COPB2-201ENST00000333188 PBXIP1Q96AQ6 731 aa9.02□□□□□ -0.97
COPB2-201ENST00000333188 DDX50Q9BQ39 737 aaKnown RBP9.02□□□□□ -0.97
COPB2-201ENST00000333188 SLC39A3Q9BRY0 314 aa9.02□□□□□ -0.97
COPB2-201ENST00000333188 BTBD10Q9BSF8 475 aa9.02□□□□□ -0.97
COPB2-201ENST00000333188 WRAP53Q9BUR4 548 aaKnown RBP9.02□□□□□ -0.97
COPB2-201ENST00000333188 EBF3Q9H4W6 596 aa9.02□□□□□ -0.97
COPB2-201ENST00000333188 FETUBQ9UGM5 382 aa9.02□□□□□ -0.97
COPB2-201ENST00000333188 CDYLQ9Y232 598 aa9.02□□□□□ -0.97
COPB2-201ENST00000333188 RAD54BQ9Y620 910 aa9.02□□□□□ -0.97
COPB2-201ENST00000333188 SIP14410 1827 aa9.02□□□□□ -0.97
COPB2-201ENST00000333188 ARHGAP10A1A4S6 786 aa9.01□□□□□ -0.97
COPB2-201ENST00000333188 PABPN1LA6NDY0 278 aaKnown RBP9.01□□□□□ -0.97
COPB2-201ENST00000333188 OR2AG2A6NM03 316 aa9.01□□□□□ -0.97
COPB2-201ENST00000333188 TPST1O60507 370 aa9.01□□□□□ -0.97
COPB2-201ENST00000333188 FGF1P05230 155 aa9.01□□□□□ -0.97
COPB2-201ENST00000333188 DHRS4L1P0CG22 281 aa9.01□□□□□ -0.97
COPB2-201ENST00000333188 GRK2P25098 689 aa9.01□□□□□ -0.97
COPB2-201ENST00000333188 COPAP53621 1224 aa9.01□□□□□ -0.97
COPB2-201ENST00000333188 TNK2Q07912 1038 aa9.01□□□□□ -0.97
COPB2-201ENST00000333188 ARHGEF7Q14155 803 aa9.01□□□□□ -0.97
COPB2-201ENST00000333188 LSM12Q3MHD2 195 aaKnown RBP9.01□□□□□ -0.97
COPB2-201ENST00000333188 LIPMQ5VYY2 423 aa9.01□□□□□ -0.97
COPB2-201ENST00000333188 SMYD5Q6GMV2 418 aa9.01□□□□□ -0.97
COPB2-201ENST00000333188 PIWIL4Q7Z3Z4 852 aaKnown RBP9.01□□□□□ -0.97
COPB2-201ENST00000333188 HPS6Q86YV9 775 aa9.01□□□□□ -0.97
COPB2-201ENST00000333188 CNPY4Q8N129 248 aa9.01□□□□□ -0.97
COPB2-201ENST00000333188 C2orf73Q8N5S3 287 aaPredicted RBP9.01□□□□□ -0.97
COPB2-201ENST00000333188 CDYL2Q8N8U2 506 aa9.01□□□□□ -0.97
COPB2-201ENST00000333188 LMNTD1Q8N9Z9 388 aa9.01□□□□□ -0.97
COPB2-201ENST00000333188 SLC7A6OSQ96CW6 309 aaPredicted RBP9.01□□□□□ -0.97
COPB2-201ENST00000333188 LINGO1Q96FE5 620 aa9.01□□□□□ -0.97
COPB2-201ENST00000333188 KCNK4Q9NYG8 393 aa9.01□□□□□ -0.97
COPB2-201ENST00000333188 TRPM7Q96QT4 1865 aa9.01□□□□□ -0.97
COPB2-201ENST00000333188 CFAP73A6NFT4 308 aa9.01□□□□□ -0.97
COPB2-201ENST00000333188 G3V2L1 256 aa9.01□□□□□ -0.97
COPB2-201ENST00000333188 AP3B1O00203 1094 aa9.01□□□□□ -0.97
COPB2-201ENST00000333188 RPP40O75818 363 aaKnown RBP9.01□□□□□ -0.97
COPB2-201ENST00000333188 DNAJC8O75937 253 aaPredicted RBP9.01□□□□□ -0.97
COPB2-201ENST00000333188 MAPKAPK2P49137 400 aa9.01□□□□□ -0.97
COPB2-201ENST00000333188 MAP7D1Q3KQU3 841 aa9.01□□□□□ -0.97
COPB2-201ENST00000333188 GK5Q6ZS86 529 aa9.01□□□□□ -0.97
COPB2-201ENST00000333188 GET4Q7L5D6 327 aaPredicted RBP9.01□□□□□ -0.97
COPB2-201ENST00000333188 ANKRD33Q7Z3H0 272 aa9.01□□□□□ -0.97
COPB2-201ENST00000333188 HJURPQ8NCD3 748 aaPredicted RBP9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms