RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 NAT9Q9BTE0 207 aa15.88■□□□□ 0.13
PDGFB-201ENST00000331163 SFXN1Q9H9B4 322 aa15.88■□□□□ 0.13
PDGFB-201ENST00000331163 RC3H2Q9HBD1 1191 aaKnown RBP15.88■□□□□ 0.13
PDGFB-201ENST00000331163 ZFYVE1Q9HBF4 777 aa15.88■□□□□ 0.13
PDGFB-201ENST00000331163 SMAPO00193 183 aa15.88■□□□□ 0.13
PDGFB-201ENST00000331163 GIPC1O14908 333 aa15.88■□□□□ 0.13
PDGFB-201ENST00000331163 KDELR3O43731 214 aa15.88■□□□□ 0.13
PDGFB-201ENST00000331163 SPDYCQ5MJ68 293 aa15.88■□□□□ 0.13
PDGFB-201ENST00000331163 RNF43Q68DV7 783 aa15.88■□□□□ 0.13
PDGFB-201ENST00000331163 CXorf57Q6NSI4 855 aaKnown RBP15.88■□□□□ 0.13
PDGFB-201ENST00000331163 RFLNAQ6ZTI6 216 aa15.88■□□□□ 0.13
PDGFB-201ENST00000331163 FRMD8Q9BZ67 464 aaPredicted RBP15.88■□□□□ 0.13
PDGFB-201ENST00000331163 SNX15Q9NRS6 342 aa15.88■□□□□ 0.13
PDGFB-201ENST00000331163 MARCH4Q9P2E8 410 aaPredicted RBP15.88■□□□□ 0.13
PDGFB-201ENST00000331163 GOLGA8QA0A0J9YX86 632 aa15.88■□□□□ 0.13
PDGFB-201ENST00000331163 GOLGA8OA6NCC3 632 aa15.88■□□□□ 0.13
PDGFB-201ENST00000331163 GOLGA8NF8WBI6 632 aa15.88■□□□□ 0.13
PDGFB-201ENST00000331163 TXNDC9O14530 226 aa15.88■□□□□ 0.13
PDGFB-201ENST00000331163 SPAG6O75602 509 aa15.88■□□□□ 0.13
PDGFB-201ENST00000331163 NFATC1O95644 943 aa15.88■□□□□ 0.13
PDGFB-201ENST00000331163 ZDHHC11BP0C7U3 371 aa15.88■□□□□ 0.13
PDGFB-201ENST00000331163 ROR2Q01974 943 aaKnown RBP15.88■□□□□ 0.13
PDGFB-201ENST00000331163 ZRSR2Q15696 482 aaKnown RBP15.88■□□□□ 0.13
PDGFB-201ENST00000331163 AAK1Q2M2I8 961 aa15.88■□□□□ 0.13
PDGFB-201ENST00000331163 FRA10AC1Q70Z53 315 aa15.88■□□□□ 0.13
PDGFB-201ENST00000331163 SETD3Q86TU7 594 aaPredicted RBP15.88■□□□□ 0.13
PDGFB-201ENST00000331163 DEFB119Q8N690 84 aa15.88■□□□□ 0.13
PDGFB-201ENST00000331163 DCUN1D1Q96GG9 259 aa15.88■□□□□ 0.13
PDGFB-201ENST00000331163 LRRC3BQ96PB8 259 aa15.88■□□□□ 0.13
PDGFB-201ENST00000331163 OSGEPL1Q9H4B0 414 aa15.88■□□□□ 0.13
PDGFB-201ENST00000331163 NSUN3Q9H649 340 aaKnown RBP15.88■□□□□ 0.13
PDGFB-201ENST00000331163 ALG9Q9H6U8 611 aa15.88■□□□□ 0.13
PDGFB-201ENST00000331163 CATSPERZQ9NTU4 200 aa15.88■□□□□ 0.13
PDGFB-201ENST00000331163 HEY2Q9UBP5 337 aa15.88■□□□□ 0.13
PDGFB-201ENST00000331163 PRKAG3Q9UGI9 489 aa15.88■□□□□ 0.13
PDGFB-201ENST00000331163 FBXL21Q9UKT6 434 aa15.88■□□□□ 0.13
PDGFB-201ENST00000331163 PRKAB1Q9Y478 270 aa15.88■□□□□ 0.13
PDGFB-201ENST00000331163 TCAF1Q9Y4C2 921 aa15.88■□□□□ 0.13
PDGFB-201ENST00000331163 KNTC1P50748 2209 aa15.88■□□□□ 0.13
PDGFB-201ENST00000331163 GPR179Q6PRD1 2367 aa15.88■□□□□ 0.13
PDGFB-201ENST00000331163 CARNS1A5YM72 827 aa15.87■□□□□ 0.13
PDGFB-201ENST00000331163 LYPLA1O75608 230 aaPredicted RBP15.87■□□□□ 0.13
PDGFB-201ENST00000331163 LEFTY1O75610 366 aa15.87■□□□□ 0.13
PDGFB-201ENST00000331163 RNASEH2AO75792 299 aaKnown RBP15.87■□□□□ 0.13
PDGFB-201ENST00000331163 GNAZP19086 355 aa15.87■□□□□ 0.13
PDGFB-201ENST00000331163 CREB5Q02930 508 aa15.87■□□□□ 0.13
PDGFB-201ENST00000331163 CYTH1Q15438 398 aa15.87■□□□□ 0.13
PDGFB-201ENST00000331163 SGO1Q5FBB7 561 aa15.87■□□□□ 0.13
PDGFB-201ENST00000331163 DGKKQ5KSL6 1271 aa15.87■□□□□ 0.13
PDGFB-201ENST00000331163 SPANXN3Q5MJ09 141 aa15.87■□□□□ 0.13
PDGFB-201ENST00000331163 GRAMD4Q6IC98 578 aa15.87■□□□□ 0.13
PDGFB-201ENST00000331163 ADGRG2Q8IZP9 1017 aa15.87■□□□□ 0.13
PDGFB-201ENST00000331163 STK40Q8N2I9 435 aa15.87■□□□□ 0.13
PDGFB-201ENST00000331163 CDC26Q8NHZ8 85 aa15.87■□□□□ 0.13
PDGFB-201ENST00000331163 SLC44A1Q8WWI5 657 aa15.87■□□□□ 0.13
PDGFB-201ENST00000331163 LRMDAQ9H2I8 198 aa15.87■□□□□ 0.13
PDGFB-201ENST00000331163 WASF2Q9Y6W5 498 aa15.87■□□□□ 0.13
PDGFB-201ENST00000331163 ANKRD66B4E2M5 251 aa15.87■□□□□ 0.13
PDGFB-201ENST00000331163 CD3EAPO15446 510 aaKnown RBP15.87■□□□□ 0.13
PDGFB-201ENST00000331163 OR1I1O60431 355 aa15.87■□□□□ 0.13
PDGFB-201ENST00000331163 AHSGP02765 367 aa15.87■□□□□ 0.13
PDGFB-201ENST00000331163 C2P06681 752 aa15.87■□□□□ 0.13
PDGFB-201ENST00000331163 TROVE2P10155 538 aaKnown RBP eCLIP15.87■□□□□ 0.13
PDGFB-201ENST00000331163 ZNF534Q76KX8 674 aa15.87■□□□□ 0.13
PDGFB-201ENST00000331163 TMC8Q8IU68 726 aa15.87■□□□□ 0.13
PDGFB-201ENST00000331163 TRMT2BQ96GJ1 504 aaKnown RBP15.87■□□□□ 0.13
PDGFB-201ENST00000331163 IL12RB2Q99665 862 aa15.87■□□□□ 0.13
PDGFB-201ENST00000331163 SLC24A2Q9UI40 661 aa15.87■□□□□ 0.13
PDGFB-201ENST00000331163 INVSQ9Y283 1065 aa15.87■□□□□ 0.13
PDGFB-201ENST00000331163 ACOT9Q9Y305 439 aa15.87■□□□□ 0.13
PDGFB-201ENST00000331163 SUPT3HB4E1H0 165 aa15.87■□□□□ 0.13
PDGFB-201ENST00000331163 TK2O00142 265 aa15.87■□□□□ 0.13
PDGFB-201ENST00000331163 PFDN6O15212 129 aa15.87■□□□□ 0.13
PDGFB-201ENST00000331163 SUPT3HO75486 399 aa15.87■□□□□ 0.13
PDGFB-201ENST00000331163 ESRRAP11474 423 aaPredicted RBP15.87■□□□□ 0.13
PDGFB-201ENST00000331163 LPOP22079 712 aaPredicted RBP15.87■□□□□ 0.13
PDGFB-201ENST00000331163 VHLP40337 213 aa15.87■□□□□ 0.13
PDGFB-201ENST00000331163 ERVK-21P61565 698 aa15.87■□□□□ 0.13
PDGFB-201ENST00000331163 CUL3Q13618 768 aa15.87■□□□□ 0.13
PDGFB-201ENST00000331163 OR2AP1Q8NGE2 309 aa15.87■□□□□ 0.13
PDGFB-201ENST00000331163 RFWD2Q8NHY2 731 aa15.87■□□□□ 0.13
PDGFB-201ENST00000331163 SLC7A6OSQ96CW6 309 aaPredicted RBP15.87■□□□□ 0.13
PDGFB-201ENST00000331163 OSBPL6Q9BZF3 934 aa15.87■□□□□ 0.13
PDGFB-201ENST00000331163 INTS6Q9UL03 887 aaKnown RBP15.87■□□□□ 0.13
PDGFB-201ENST00000331163 SLC31A1O15431 190 aa15.86■□□□□ 0.13
PDGFB-201ENST00000331163 CDH13P55290 713 aa15.86■□□□□ 0.13
PDGFB-201ENST00000331163 PLA2G4EQ3MJ16 856 aa15.86■□□□□ 0.13
PDGFB-201ENST00000331163 LRRC23Q53EV4 343 aaPredicted RBP15.86■□□□□ 0.13
PDGFB-201ENST00000331163 PDPK2PQ6A1A2 396 aa15.86■□□□□ 0.13
PDGFB-201ENST00000331163 OR4L1Q8NH43 312 aa15.86■□□□□ 0.13
PDGFB-201ENST00000331163 FGF14Q92915 247 aa15.86■□□□□ 0.13
PDGFB-201ENST00000331163 PRR11Q96HE9 360 aaPredicted RBP15.86■□□□□ 0.13
PDGFB-201ENST00000331163 CLPBQ9H078 707 aa15.86■□□□□ 0.13
PDGFB-201ENST00000331163 DCLRE1BQ9H816 532 aa15.86■□□□□ 0.13
PDGFB-201ENST00000331163 ARHGAP26Q9UNA1 814 aa15.86■□□□□ 0.13
PDGFB-201ENST00000331163 LRRC42Q9Y546 428 aa15.86■□□□□ 0.13
PDGFB-201ENST00000331163 MAP3K7O43318 606 aa15.86■□□□□ 0.13
PDGFB-201ENST00000331163 SUPT7LO94864 414 aa15.86■□□□□ 0.13
PDGFB-201ENST00000331163 PRAMEF1O95521 474 aa15.86■□□□□ 0.13
PDGFB-201ENST00000331163 SOX11P35716 441 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms