RNA–Protein interactions for RNA: ENST00000330503.11

DDX41-201, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 2,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-201ENST00000330503 XIAPP98170 497 aa16.94■□□□□ 0.3
DDX41-201ENST00000330503 PFKPQ01813 784 aa16.94■□□□□ 0.3
DDX41-201ENST00000330503 BCL2L1Q07817 233 aa16.94■□□□□ 0.3
DDX41-201ENST00000330503 SETMARQ53H47 684 aaPredicted RBP16.94■□□□□ 0.3
DDX41-201ENST00000330503 FAM91A1Q658Y4 838 aa16.94■□□□□ 0.3
DDX41-201ENST00000330503 LSMEM2Q8N112 164 aa16.94■□□□□ 0.3
DDX41-201ENST00000330503 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.94■□□□□ 0.3
DDX41-201ENST00000330503 SCG3Q8WXD2 468 aaKnown RBP16.94■□□□□ 0.3
DDX41-201ENST00000330503 PTCD3Q96EY7 689 aaKnown RBP16.94■□□□□ 0.3
DDX41-201ENST00000330503 TCF12Q99081 682 aa16.94■□□□□ 0.3
DDX41-201ENST00000330503 LBHD1Q9BQE6 289 aaPredicted RBP16.94■□□□□ 0.3
DDX41-201ENST00000330503 CHD9Q3L8U1 2897 aa16.94■□□□□ 0.3
DDX41-201ENST00000330503 CXorf51AA0A1B0GTR3 108 aa16.93■□□□□ 0.3
DDX41-201ENST00000330503 NEDD8-MDP1E9PL57 170 aa16.93■□□□□ 0.3
DDX41-201ENST00000330503 H7C0S8 307 aa16.93■□□□□ 0.3
DDX41-201ENST00000330503 KCNA5P22460 613 aa16.93■□□□□ 0.3
DDX41-201ENST00000330503 MC4RP32245 332 aa16.93■□□□□ 0.3
DDX41-201ENST00000330503 IDH3AP50213 366 aa16.93■□□□□ 0.3
DDX41-201ENST00000330503 USP4Q13107 963 aa16.93■□□□□ 0.3
DDX41-201ENST00000330503 GPM6BQ13491 265 aa16.93■□□□□ 0.3
DDX41-201ENST00000330503 CBX2Q14781 532 aaPredicted RBP16.93■□□□□ 0.3
DDX41-201ENST00000330503 ACAP2Q15057 778 aa16.93■□□□□ 0.3
DDX41-201ENST00000330503 PSAPL1Q6NUJ1 521 aa16.93■□□□□ 0.3
DDX41-201ENST00000330503 LYSMD3Q7Z3D4 306 aa16.93■□□□□ 0.3
DDX41-201ENST00000330503 ADGRD2Q7Z7M1 963 aa16.93■□□□□ 0.3
DDX41-201ENST00000330503 METTL3Q86U44 580 aaKnown RBP16.93■□□□□ 0.3
DDX41-201ENST00000330503 ADGRG2Q8IZP9 1017 aa16.93■□□□□ 0.3
DDX41-201ENST00000330503 ING5Q8WYH8 240 aa16.93■□□□□ 0.3
DDX41-201ENST00000330503 TMEM237Q96Q45 408 aa16.93■□□□□ 0.3
DDX41-201ENST00000330503 BBS2Q9BXC9 721 aa16.93■□□□□ 0.3
DDX41-201ENST00000330503 CDH19Q9H159 772 aa16.93■□□□□ 0.3
DDX41-201ENST00000330503 SPHK2Q9NRA0 654 aa16.93■□□□□ 0.3
DDX41-201ENST00000330503 ZDHHC7Q9NXF8 308 aa16.93■□□□□ 0.3
DDX41-201ENST00000330503 HS3ST2Q9Y278 367 aa16.93■□□□□ 0.3
DDX41-201ENST00000330503 MED16Q9Y2X0 877 aa16.93■□□□□ 0.3
DDX41-201ENST00000330503 NEMP2A6NFY4 417 aa16.93■□□□□ 0.3
DDX41-201ENST00000330503 HOXB8P17481 243 aaPredicted RBP16.93■□□□□ 0.3
DDX41-201ENST00000330503 FMO4P31512 558 aa16.93■□□□□ 0.3
DDX41-201ENST00000330503 KPNA2P52292 529 aaKnown RBP16.93■□□□□ 0.3
DDX41-201ENST00000330503 DNAJB13P59910 316 aa16.93■□□□□ 0.3
DDX41-201ENST00000330503 RPL26P61254 145 aaKnown RBP16.93■□□□□ 0.3
DDX41-201ENST00000330503 KRT72Q14CN4 511 aa16.93■□□□□ 0.3
DDX41-201ENST00000330503 CDKN3Q16667 212 aa16.93■□□□□ 0.3
DDX41-201ENST00000330503 ITFG1Q8TB96 612 aa16.93■□□□□ 0.3
DDX41-201ENST00000330503 LRRC3BQ96PB8 259 aa16.93■□□□□ 0.3
DDX41-201ENST00000330503 DNAJC28Q9NX36 388 aa16.93■□□□□ 0.3
DDX41-201ENST00000330503 ARMCX1Q9P291 453 aa16.93■□□□□ 0.3
DDX41-201ENST00000330503 RPL26L1Q9UNX3 145 aaKnown RBP16.93■□□□□ 0.3
DDX41-201ENST00000330503 CAPN14A8MX76 684 aa16.92■□□□□ 0.3
DDX41-201ENST00000330503 IGSF6O95976 241 aa16.92■□□□□ 0.3
DDX41-201ENST00000330503 TCF3P15923 654 aa16.92■□□□□ 0.3
DDX41-201ENST00000330503 ATP5F1P24539 256 aaPredicted RBP16.92■□□□□ 0.3
DDX41-201ENST00000330503 MAPK8P45983 427 aa16.92■□□□□ 0.3
DDX41-201ENST00000330503 ELF3P78545 371 aaPredicted RBP16.92■□□□□ 0.3
DDX41-201ENST00000330503 RCN2Q14257 317 aa16.92■□□□□ 0.3
DDX41-201ENST00000330503 MYLK3Q32MK0 819 aa16.92■□□□□ 0.3
DDX41-201ENST00000330503 ARL13AQ5H913 290 aaPredicted RBP16.92■□□□□ 0.3
DDX41-201ENST00000330503 LY6G5CQ5SRR4 150 aa16.92■□□□□ 0.3
DDX41-201ENST00000330503 VWA5B1Q5TIE3 1220 aa16.92■□□□□ 0.3
DDX41-201ENST00000330503 ISCA2Q86U28 154 aa16.92■□□□□ 0.3
DDX41-201ENST00000330503 ZSWIM9Q86XI8 627 aa16.92■□□□□ 0.3
DDX41-201ENST00000330503 OR2AP1Q8NGE2 309 aa16.92■□□□□ 0.3
DDX41-201ENST00000330503 ISG20Q96AZ6 181 aaKnown RBP16.92■□□□□ 0.3
DDX41-201ENST00000330503 NSL1Q96IY1 281 aa16.92■□□□□ 0.3
DDX41-201ENST00000330503 BIRC8Q96P09 236 aa16.92■□□□□ 0.3
DDX41-201ENST00000330503 GPR63Q9BZJ6 419 aa16.92■□□□□ 0.3
DDX41-201ENST00000330503 LRMDAQ9H2I8 198 aa16.92■□□□□ 0.3
DDX41-201ENST00000330503 WNT6Q9Y6F9 365 aa16.92■□□□□ 0.3
DDX41-201ENST00000330503 A0A0J9YYE9 177 aa16.91■□□□□ 0.3
DDX41-201ENST00000330503 UBA6A0AVT1 1052 aaPredicted RBP16.91■□□□□ 0.3
DDX41-201ENST00000330503 SOCS5O75159 536 aa16.91■□□□□ 0.3
DDX41-201ENST00000330503 NDUFS3O75489 264 aa16.91■□□□□ 0.3
DDX41-201ENST00000330503 TRBC1P01850 177 aa16.91■□□□□ 0.3
DDX41-201ENST00000330503 POU2F2P09086 479 aa16.91■□□□□ 0.3
DDX41-201ENST00000330503 RBP1P09455 135 aa16.91■□□□□ 0.3
DDX41-201ENST00000330503 TYRP14679 529 aa16.91■□□□□ 0.3
DDX41-201ENST00000330503 MPSTP25325 297 aa16.91■□□□□ 0.3
DDX41-201ENST00000330503 HNF1BP35680 557 aa16.91■□□□□ 0.3
DDX41-201ENST00000330503 HMGCLP35914 325 aa16.91■□□□□ 0.3
DDX41-201ENST00000330503 ERVK-21P61565 698 aa16.91■□□□□ 0.3
DDX41-201ENST00000330503 PDE12Q6L8Q7 609 aaKnown RBP16.91■□□□□ 0.3
DDX41-201ENST00000330503 PACS2Q86VP3 889 aa16.91■□□□□ 0.3
DDX41-201ENST00000330503 TREML1Q86YW5 311 aa16.91■□□□□ 0.3
DDX41-201ENST00000330503 C12orf76Q8N812 135 aaPredicted RBP16.91■□□□□ 0.3
DDX41-201ENST00000330503 RILPQ96NA2 401 aa16.91■□□□□ 0.3
DDX41-201ENST00000330503 ILKAPQ9H0C8 392 aaPredicted RBP16.91■□□□□ 0.3
DDX41-201ENST00000330503 STN1Q9H668 368 aaKnown RBP16.91■□□□□ 0.3
DDX41-201ENST00000330503 ATP13A3Q9H7F0 1226 aa16.91■□□□□ 0.3
DDX41-201ENST00000330503 POPDC3Q9HBV1 291 aa16.91■□□□□ 0.3
DDX41-201ENST00000330503 TBC1D14Q9P2M4 693 aa16.91■□□□□ 0.3
DDX41-201ENST00000330503 SLCO3A1Q9UIG8 710 aa16.91■□□□□ 0.3
DDX41-201ENST00000330503 LNPEPQ9UIQ6 1025 aa16.91■□□□□ 0.3
DDX41-201ENST00000330503 RAP2CQ9Y3L5 183 aa16.91■□□□□ 0.3
DDX41-201ENST00000330503 TRIM24O15164 1050 aa16.91■□□□□ 0.3
DDX41-201ENST00000330503 ZBTB14O43829 449 aa16.91■□□□□ 0.3
DDX41-201ENST00000330503 OR1I1O60431 355 aa16.91■□□□□ 0.3
DDX41-201ENST00000330503 ATP5BP06576 529 aaKnown RBP16.91■□□□□ 0.3
DDX41-201ENST00000330503 KRT16P08779 473 aa16.91■□□□□ 0.3
DDX41-201ENST00000330503 PABPC1P11940 636 aaKnown RBP16.91■□□□□ 0.3
DDX41-201ENST00000330503 CD1DP15813 335 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms