RNA–Protein interactions for RNA: ENST00000324309.8

CCDC149-201, Transcript of coiled-coil domain containing 149, humanhuman

TSL 2

Gene CCDC149, Length 5,604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149-201ENST00000324309 ZNF711Q9Y462 761 aa12.79□□□□□ -0.36
CCDC149-201ENST00000324309 EPOP01588 193 aa12.78□□□□□ -0.36
CCDC149-201ENST00000324309 PIM1P11309 404 aaPredicted RBP12.78□□□□□ -0.36
CCDC149-201ENST00000324309 NFYCQ13952 458 aa12.78□□□□□ -0.36
CCDC149-201ENST00000324309 INTS11Q5TA45 600 aaKnown RBP12.78□□□□□ -0.36
CCDC149-201ENST00000324309 ANXA8L1Q5VT79 327 aa12.78□□□□□ -0.36
CCDC149-201ENST00000324309 TRPM8Q7Z2W7 1104 aa12.78□□□□□ -0.36
CCDC149-201ENST00000324309 THOC1Q96FV9 657 aaKnown RBP12.78□□□□□ -0.36
CCDC149-201ENST00000324309 BORCS6Q96GS4 357 aa12.78□□□□□ -0.36
CCDC149-201ENST00000324309 EXOC2Q96KP1 924 aa12.78□□□□□ -0.36
CCDC149-201ENST00000324309 THUMPD3Q9BV44 507 aaKnown RBP12.78□□□□□ -0.36
CCDC149-201ENST00000324309 WDR26Q9H7D7 661 aa12.78□□□□□ -0.36
CCDC149-201ENST00000324309 TCF7L2Q9NQB0 619 aa12.78□□□□□ -0.36
CCDC149-201ENST00000324309 DMGDHQ9UI17 866 aaKnown RBP12.78□□□□□ -0.36
CCDC149-201ENST00000324309 HS3ST4Q9Y661 456 aa12.78□□□□□ -0.36
CCDC149-201ENST00000324309 TRAFD1O14545 582 aaPredicted RBP12.78□□□□□ -0.36
CCDC149-201ENST00000324309 LBPP18428 481 aa12.78□□□□□ -0.36
CCDC149-201ENST00000324309 RPL14P50914 215 aaKnown RBP12.78□□□□□ -0.36
CCDC149-201ENST00000324309 PGS1Q32NB8 556 aa12.78□□□□□ -0.36
CCDC149-201ENST00000324309 C22orf39Q6P5X5 142 aa12.78□□□□□ -0.36
CCDC149-201ENST00000324309 UBE2R2Q712K3 238 aaPredicted RBP12.78□□□□□ -0.36
CCDC149-201ENST00000324309 SELENOMQ8WWX9 145 aa12.78□□□□□ -0.36
CCDC149-201ENST00000324309 PEX13Q92968 403 aa12.78□□□□□ -0.36
CCDC149-201ENST00000324309 CENPTQ96BT3 561 aa12.78□□□□□ -0.36
CCDC149-201ENST00000324309 FCF1Q9Y324 198 aaKnown RBP12.78□□□□□ -0.36
CCDC149-201ENST00000324309 TELO2Q9Y4R8 837 aa12.78□□□□□ -0.36
CCDC149-201ENST00000324309 PRR5-ARHGAP8B1AHC4 643 aa12.78□□□□□ -0.36
CCDC149-201ENST00000324309 ADAMTS3O15072 1205 aa12.78□□□□□ -0.36
CCDC149-201ENST00000324309 ITGA2BP08514 1039 aa12.78□□□□□ -0.36
CCDC149-201ENST00000324309 VARSP26640 1264 aaKnown RBP12.78□□□□□ -0.36
CCDC149-201ENST00000324309 RANBP1P43487 201 aa12.78□□□□□ -0.36
CCDC149-201ENST00000324309 IFI35P80217 286 aaPredicted RBP12.78□□□□□ -0.36
CCDC149-201ENST00000324309 CYP1B1Q16678 543 aa12.78□□□□□ -0.36
CCDC149-201ENST00000324309 ZNF544Q6NX49 715 aa12.78□□□□□ -0.36
CCDC149-201ENST00000324309 ZNF567Q8N184 647 aa12.78□□□□□ -0.36
CCDC149-201ENST00000324309 JADE3Q92613 823 aa12.78□□□□□ -0.36
CCDC149-201ENST00000324309 GPR62Q9BZJ7 368 aa12.78□□□□□ -0.36
CCDC149-201ENST00000324309 ADGRE2Q9UHX3 823 aa12.78□□□□□ -0.36
CCDC149-201ENST00000324309 GSAPA4D1B5 854 aa12.78□□□□□ -0.36
CCDC149-201ENST00000324309 PPEF2O14830 753 aa12.78□□□□□ -0.36
CCDC149-201ENST00000324309 SKAP2O75563 359 aaPredicted RBP12.78□□□□□ -0.36
CCDC149-201ENST00000324309 KRT75O95678 551 aa12.78□□□□□ -0.36
CCDC149-201ENST00000324309 DRD1P21728 446 aa12.78□□□□□ -0.36
CCDC149-201ENST00000324309 DSC2Q02487 901 aa12.78□□□□□ -0.36
CCDC149-201ENST00000324309 ACTN3Q08043 901 aaPredicted RBP12.78□□□□□ -0.36
CCDC149-201ENST00000324309 INO80DQ53TQ3 878 aaPredicted RBP12.78□□□□□ -0.36
CCDC149-201ENST00000324309 RGS9BPQ6ZS82 235 aa12.78□□□□□ -0.36
CCDC149-201ENST00000324309 SYT12Q8IV01 421 aa12.78□□□□□ -0.36
CCDC149-201ENST00000324309 CDK20Q8IZL9 346 aa12.78□□□□□ -0.36
CCDC149-201ENST00000324309 LINGO1Q96FE5 620 aa12.78□□□□□ -0.36
CCDC149-201ENST00000324309 BPIFA1Q9NP55 256 aa12.78□□□□□ -0.36
CCDC149-201ENST00000324309 DNAJC11Q9NVH1 559 aa12.78□□□□□ -0.36
CCDC149-201ENST00000324309 MARCOQ9UEW3 520 aaPredicted RBP12.78□□□□□ -0.36
CCDC149-201ENST00000324309 KCNJ13O60928 360 aa12.77□□□□□ -0.36
CCDC149-201ENST00000324309 AP2A2O94973 939 aa12.77□□□□□ -0.36
CCDC149-201ENST00000324309 PSMA4P25789 261 aaKnown RBP12.77□□□□□ -0.36
CCDC149-201ENST00000324309 SERPINB1P30740 379 aa12.77□□□□□ -0.36
CCDC149-201ENST00000324309 GTF2A1P52655 376 aaPredicted RBP12.77□□□□□ -0.36
CCDC149-201ENST00000324309 SLC36A4Q6YBV0 504 aa12.77□□□□□ -0.36
CCDC149-201ENST00000324309 GPRIN3Q6ZVF9 776 aa12.77□□□□□ -0.36
CCDC149-201ENST00000324309 SLC25A23Q9BV35 468 aa12.77□□□□□ -0.36
CCDC149-201ENST00000324309 RGPD3A6NKT7 1758 aaPredicted RBP12.77□□□□□ -0.36
CCDC149-201ENST00000324309 RGPD4Q7Z3J3 1758 aa12.77□□□□□ -0.36
CCDC149-201ENST00000324309 TSPAN6O43657 245 aa12.77□□□□□ -0.36
CCDC149-201ENST00000324309 PRAMEF1O95521 474 aa12.77□□□□□ -0.36
CCDC149-201ENST00000324309 IFNGR2P38484 337 aa12.77□□□□□ -0.36
CCDC149-201ENST00000324309 INPP1P49441 399 aa12.77□□□□□ -0.36
CCDC149-201ENST00000324309 CLLU1OSQ5K130 101 aa12.77□□□□□ -0.36
CCDC149-201ENST00000324309 PACS1Q6VY07 963 aa12.77□□□□□ -0.36
CCDC149-201ENST00000324309 SLC41A1Q8IVJ1 513 aa12.77□□□□□ -0.36
CCDC149-201ENST00000324309 RAD51AP1Q96B01 352 aa12.77□□□□□ -0.36
CCDC149-201ENST00000324309 SEC16BQ96JE7 1060 aa12.77□□□□□ -0.36
CCDC149-201ENST00000324309 DNAJC1Q96KC8 554 aaKnown RBP12.77□□□□□ -0.36
CCDC149-201ENST00000324309 TAGLN3Q9UI15 199 aa12.77□□□□□ -0.36
CCDC149-201ENST00000324309 RGSL1A5PLK6 1076 aa12.77□□□□□ -0.37
CCDC149-201ENST00000324309 RASSF9O75901 435 aa12.77□□□□□ -0.37
CCDC149-201ENST00000324309 H2AFXP16104 143 aaPredicted RBP12.77□□□□□ -0.37
CCDC149-201ENST00000324309 JAK1P23458 1154 aa12.77□□□□□ -0.37
CCDC149-201ENST00000324309 GBE1Q04446 702 aa12.77□□□□□ -0.37
CCDC149-201ENST00000324309 GALNT2Q10471 571 aa12.77□□□□□ -0.37
CCDC149-201ENST00000324309 KRT73Q86Y46 540 aa12.77□□□□□ -0.37
CCDC149-201ENST00000324309 CLYBLQ8N0X4 340 aa12.77□□□□□ -0.37
CCDC149-201ENST00000324309 ZNF513Q8N8E2 541 aaPredicted RBP12.77□□□□□ -0.37
CCDC149-201ENST00000324309 ICA1LQ8NDH6 482 aa12.77□□□□□ -0.37
CCDC149-201ENST00000324309 FOXJ1Q92949 421 aa12.77□□□□□ -0.37
CCDC149-201ENST00000324309 TSGA13Q96PP4 275 aa12.77□□□□□ -0.37
CCDC149-201ENST00000324309 PCDHGB3Q9Y5G1 929 aa12.77□□□□□ -0.37
CCDC149-201ENST00000324309 A8MX80 341 aa12.77□□□□□ -0.37
CCDC149-201ENST00000324309 PRAMEF11O60813 436 aa12.77□□□□□ -0.37
CCDC149-201ENST00000324309 CALB2P22676 271 aa12.77□□□□□ -0.37
CCDC149-201ENST00000324309 GATMP50440 423 aa12.77□□□□□ -0.37
CCDC149-201ENST00000324309 PITRM1Q5JRX3 1037 aa12.77□□□□□ -0.37
CCDC149-201ENST00000324309 ST13P4Q8IZP2 240 aaPredicted RBP12.77□□□□□ -0.37
CCDC149-201ENST00000324309 PTGR2Q8N8N7 351 aaPredicted RBP12.77□□□□□ -0.37
CCDC149-201ENST00000324309 SLCO2A1Q92959 643 aa12.77□□□□□ -0.37
CCDC149-201ENST00000324309 FAM120BQ96EK7 910 aaKnown RBP12.77□□□□□ -0.37
CCDC149-201ENST00000324309 KLQ9UEF7 1012 aa12.77□□□□□ -0.37
CCDC149-201ENST00000324309 HMGXB4Q9UGU5 601 aa12.77□□□□□ -0.37
CCDC149-201ENST00000324309 ZNF840PA6NDX5 716 aa12.77□□□□□ -0.37
CCDC149-201ENST00000324309 RASGRP1O95267 797 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms