RNA–Protein interactions for RNA: ENST00000323853.9

SNRNP200-201, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP200, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-201ENST00000323853 INTS6LQ5JSJ4 861 aaKnown RBP10.91□□□□□ -0.66
SNRNP200-201ENST00000323853 HDDC2Q7Z4H3 204 aa10.91□□□□□ -0.66
SNRNP200-201ENST00000323853 TWIST2Q8WVJ9 160 aa10.91□□□□□ -0.66
SNRNP200-201ENST00000323853 CLPTM1LQ96KA5 538 aa10.91□□□□□ -0.66
SNRNP200-201ENST00000323853 C12orf65Q9H3J6 166 aaKnown RBP10.91□□□□□ -0.66
SNRNP200-201ENST00000323853 NOL11Q9H8H0 719 aaKnown RBP10.91□□□□□ -0.66
SNRNP200-201ENST00000323853 ZNF232Q9UNY5 417 aa10.91□□□□□ -0.66
SNRNP200-201ENST00000323853 TIPRLO75663 272 aa10.91□□□□□ -0.66
SNRNP200-201ENST00000323853 IL6P05231 212 aa10.91□□□□□ -0.66
SNRNP200-201ENST00000323853 DUSP28Q4G0W2 176 aa10.91□□□□□ -0.66
SNRNP200-201ENST00000323853 SPPL2CQ8IUH8 684 aa10.91□□□□□ -0.66
SNRNP200-201ENST00000323853 ZBTB2Q8N680 514 aa10.91□□□□□ -0.66
SNRNP200-201ENST00000323853 RBM15BQ8NDT2 890 aaKnown RBP10.91□□□□□ -0.66
SNRNP200-201ENST00000323853 SLC38A2Q96QD8 506 aa10.91□□□□□ -0.66
SNRNP200-201ENST00000323853 IGFLR1Q9H665 355 aa10.91□□□□□ -0.66
SNRNP200-201ENST00000323853 APOBEC3GQ9HC16 384 aaKnown RBP10.91□□□□□ -0.66
SNRNP200-201ENST00000323853 TOR4AQ9NXH8 423 aa10.91□□□□□ -0.66
SNRNP200-201ENST00000323853 GRHL1Q9NZI5 618 aa10.91□□□□□ -0.66
SNRNP200-201ENST00000323853 GMIPQ9P107 970 aa10.91□□□□□ -0.66
SNRNP200-201ENST00000323853 TCAF1Q9Y4C2 921 aa10.91□□□□□ -0.66
SNRNP200-201ENST00000323853 C1QTNF3-AMACRE9PGA6 284 aa10.91□□□□□ -0.66
SNRNP200-201ENST00000323853 INHBEP58166 350 aa10.91□□□□□ -0.66
SNRNP200-201ENST00000323853 ZNF846Q147U1 533 aa10.91□□□□□ -0.66
SNRNP200-201ENST00000323853 PTF1AQ7RTS3 328 aa10.91□□□□□ -0.66
SNRNP200-201ENST00000323853 CFAP52Q8N1V2 620 aa10.91□□□□□ -0.66
SNRNP200-201ENST00000323853 TCAIMQ8N3R3 496 aa10.91□□□□□ -0.66
SNRNP200-201ENST00000323853 FITM2Q8N6M3 262 aa10.91□□□□□ -0.66
SNRNP200-201ENST00000323853 MUC13Q9H3R2 512 aa10.91□□□□□ -0.66
SNRNP200-201ENST00000323853 C8orf4Q9NR00 106 aa10.91□□□□□ -0.66
SNRNP200-201ENST00000323853 FBXO10Q9UK96 956 aa10.91□□□□□ -0.66
SNRNP200-201ENST00000323853 LYVE1Q9Y5Y7 322 aa10.91□□□□□ -0.66
SNRNP200-201ENST00000323853 ABLIM1O14639 778 aa10.91□□□□□ -0.66
SNRNP200-201ENST00000323853 SEC24AO95486 1093 aa10.91□□□□□ -0.66
SNRNP200-201ENST00000323853 C2P06681 752 aa10.91□□□□□ -0.66
SNRNP200-201ENST00000323853 USP46P62068 366 aa10.91□□□□□ -0.66
SNRNP200-201ENST00000323853 GBE1Q04446 702 aa10.91□□□□□ -0.66
SNRNP200-201ENST00000323853 CYP1B1Q16678 543 aa10.91□□□□□ -0.66
SNRNP200-201ENST00000323853 HSDL1Q3SXM5 330 aa10.91□□□□□ -0.66
SNRNP200-201ENST00000323853 PMF1Q6P1K2 205 aa10.91□□□□□ -0.66
SNRNP200-201ENST00000323853 MOB2Q70IA6 237 aa10.91□□□□□ -0.66
SNRNP200-201ENST00000323853 ARMC8Q8IUR7 673 aa10.91□□□□□ -0.66
SNRNP200-201ENST00000323853 OR2T34Q8NGX1 318 aa10.91□□□□□ -0.66
SNRNP200-201ENST00000323853 OR2T3Q8NH03 318 aa10.91□□□□□ -0.66
SNRNP200-201ENST00000323853 ABCG8Q9H221 673 aa10.91□□□□□ -0.66
SNRNP200-201ENST00000323853 CHRAC1Q9NRG0 131 aa10.91□□□□□ -0.66
SNRNP200-201ENST00000323853 KIAA1522Q9P206 1035 aaPredicted RBP10.91□□□□□ -0.66
SNRNP200-201ENST00000323853 NDOR1Q9UHB4 597 aa10.91□□□□□ -0.66
SNRNP200-201ENST00000323853 ZNF490Q9ULM2 529 aaPredicted RBP10.91□□□□□ -0.66
SNRNP200-201ENST00000323853 NUDT14O95848 222 aa10.9□□□□□ -0.66
SNRNP200-201ENST00000323853 LIMK2P53671 638 aa10.9□□□□□ -0.66
SNRNP200-201ENST00000323853 SEMA5AQ13591 1074 aa10.9□□□□□ -0.66
SNRNP200-201ENST00000323853 ZSWIM7Q19AV6 140 aa10.9□□□□□ -0.66
SNRNP200-201ENST00000323853 RASAL3Q86YV0 1011 aa10.9□□□□□ -0.66
SNRNP200-201ENST00000323853 TBC1D21Q8IYX1 336 aa10.9□□□□□ -0.66
SNRNP200-201ENST00000323853 UXS1Q8NBZ7 420 aa10.9□□□□□ -0.66
SNRNP200-201ENST00000323853 PHF10Q8WUB8 498 aaKnown RBP10.9□□□□□ -0.66
SNRNP200-201ENST00000323853 FERD3LQ96RJ6 166 aa10.9□□□□□ -0.66
SNRNP200-201ENST00000323853 ADGRE2Q9UHX3 823 aa10.9□□□□□ -0.66
SNRNP200-201ENST00000323853 SAMHD1Q9Y3Z3 626 aaKnown RBP10.9□□□□□ -0.66
SNRNP200-201ENST00000323853 HOXB6P17509 224 aaKnown RBP10.9□□□□□ -0.66
SNRNP200-201ENST00000323853 IDH3AP50213 366 aa10.9□□□□□ -0.66
SNRNP200-201ENST00000323853 RFX4Q33E94 735 aa10.9□□□□□ -0.66
SNRNP200-201ENST00000323853 ANKRD23Q86SG2 305 aa10.9□□□□□ -0.66
SNRNP200-201ENST00000323853 ZNF567Q8N184 647 aa10.9□□□□□ -0.66
SNRNP200-201ENST00000323853 AHCYL2Q96HN2 611 aaKnown RBP10.9□□□□□ -0.66
SNRNP200-201ENST00000323853 TDRD1Q9BXT4 1180 aaKnown RBP10.9□□□□□ -0.66
SNRNP200-201ENST00000323853 DMAC2Q9NW81 257 aa10.9□□□□□ -0.66
SNRNP200-201ENST00000323853 AJAP1Q9UKB5 411 aaPredicted RBP10.9□□□□□ -0.66
SNRNP200-201ENST00000323853 PCDHB1Q9Y5F3 818 aa10.9□□□□□ -0.66
SNRNP200-201ENST00000323853 OR6A2O95222 327 aa10.9□□□□□ -0.66
SNRNP200-201ENST00000323853 ASGR1P07306 291 aa10.9□□□□□ -0.66
SNRNP200-201ENST00000323853 WARSP23381 471 aaKnown RBP10.9□□□□□ -0.66
SNRNP200-201ENST00000323853 MPP1Q00013 466 aa10.9□□□□□ -0.66
SNRNP200-201ENST00000323853 ACAP2Q15057 778 aa10.9□□□□□ -0.66
SNRNP200-201ENST00000323853 SLC5A9Q2M3M2 681 aa10.9□□□□□ -0.66
SNRNP200-201ENST00000323853 SWT1Q5T5J6 900 aaKnown RBP10.9□□□□□ -0.66
SNRNP200-201ENST00000323853 DRICH1Q6PGQ1 229 aaPredicted RBP10.9□□□□□ -0.66
SNRNP200-201ENST00000323853 HIPK1Q86Z02 1210 aa10.9□□□□□ -0.66
SNRNP200-201ENST00000323853 SPOCK2Q92563 424 aa10.9□□□□□ -0.66
SNRNP200-201ENST00000323853 OGDHLQ9ULD0 1010 aa10.9□□□□□ -0.66
SNRNP200-201ENST00000323853 SPATA2Q9UM82 520 aa10.9□□□□□ -0.66
SNRNP200-201ENST00000323853 AK5Q9Y6K8 562 aa10.9□□□□□ -0.66
SNRNP200-201ENST00000323853 DHX15O43143 795 aaKnown RBP10.9□□□□□ -0.66
SNRNP200-201ENST00000323853 PPIBP23284 216 aaKnown RBP10.9□□□□□ -0.66
SNRNP200-201ENST00000323853 SKP1P63208 163 aa10.9□□□□□ -0.66
SNRNP200-201ENST00000323853 CACNG1Q06432 222 aa10.9□□□□□ -0.66
SNRNP200-201ENST00000323853 GRM3Q14832 879 aa10.9□□□□□ -0.66
SNRNP200-201ENST00000323853 ZNHIT3Q15649 155 aaPredicted RBP10.9□□□□□ -0.66
SNRNP200-201ENST00000323853 BHLHB9Q6PI77 547 aa10.9□□□□□ -0.66
SNRNP200-201ENST00000323853 COMMD2Q86X83 199 aa10.9□□□□□ -0.66
SNRNP200-201ENST00000323853 FAM20CQ8IXL6 584 aa10.9□□□□□ -0.66
SNRNP200-201ENST00000323853 RAVER1Q8IY67 606 aaKnown RBP10.9□□□□□ -0.66
SNRNP200-201ENST00000323853 CPSF7Q8N684 471 aaKnown RBP10.9□□□□□ -0.66
SNRNP200-201ENST00000323853 ACSS2Q9NR19 701 aa10.9□□□□□ -0.66
SNRNP200-201ENST00000323853 NUDT4Q9NZJ9 180 aa10.9□□□□□ -0.66
SNRNP200-201ENST00000323853 SAMD4AQ9UPU9 718 aaKnown RBP10.9□□□□□ -0.66
SNRNP200-201ENST00000323853 SLC9A8Q9Y2E8 581 aa10.9□□□□□ -0.66
SNRNP200-201ENST00000323853 SUV39H1O43463 412 aa10.9□□□□□ -0.67
SNRNP200-201ENST00000323853 MTHFRP42898 656 aa10.9□□□□□ -0.67
SNRNP200-201ENST00000323853 SLC5A3P53794 718 aa10.9□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms