RNA–Protein interactions for RNA: ENST00000323055.10

PPP3CA-201, Transcript of protein phosphatase 3 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP3CA, Length 4,519 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CA-201ENST00000323055 GPR62Q9BZJ7 368 aa17.04■□□□□ 0.32
PPP3CA-201ENST00000323055 MIEF1Q9NQG6 463 aa17.04■□□□□ 0.32
PPP3CA-201ENST00000323055 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.04■□□□□ 0.32
PPP3CA-201ENST00000323055 A0A1W2PRU2 124 aa17.04■□□□□ 0.32
PPP3CA-201ENST00000323055 CARNS1A5YM72 827 aa17.04■□□□□ 0.32
PPP3CA-201ENST00000323055 ZNF839A8K0R7 811 aa17.04■□□□□ 0.32
PPP3CA-201ENST00000323055 PARNO95453 639 aaKnown RBP17.04■□□□□ 0.32
PPP3CA-201ENST00000323055 S100A3P33764 101 aa17.04■□□□□ 0.32
PPP3CA-201ENST00000323055 RAET1GQ6H3X3 334 aa17.04■□□□□ 0.32
PPP3CA-201ENST00000323055 GK5Q6ZS86 529 aa17.04■□□□□ 0.32
PPP3CA-201ENST00000323055 ZNF621Q6ZSS3 439 aa17.04■□□□□ 0.32
PPP3CA-201ENST00000323055 LENG8Q96PV6 779 aaPredicted RBP17.04■□□□□ 0.32
PPP3CA-201ENST00000323055 ZNF556Q9HAH1 456 aa17.04■□□□□ 0.32
PPP3CA-201ENST00000323055 YIPF1Q9Y548 306 aa17.04■□□□□ 0.32
PPP3CA-201ENST00000323055 DDX60LQ5H9U9 1706 aaKnown RBP17.04■□□□□ 0.32
PPP3CA-201ENST00000323055 SCN9AQ15858 1988 aa17.04■□□□□ 0.32
PPP3CA-201ENST00000323055 MBLAC1A4D2B0 266 aaPredicted RBP17.04■□□□□ 0.32
PPP3CA-201ENST00000323055 PRAMEF1O95521 474 aa17.04■□□□□ 0.32
PPP3CA-201ENST00000323055 GALNT2Q10471 571 aa17.04■□□□□ 0.32
PPP3CA-201ENST00000323055 SQLEQ14534 574 aa17.04■□□□□ 0.32
PPP3CA-201ENST00000323055 MORN1Q5T089 497 aa17.04■□□□□ 0.32
PPP3CA-201ENST00000323055 DSG4Q86SJ6 1040 aa17.04■□□□□ 0.32
PPP3CA-201ENST00000323055 BRSK1Q8TDC3 778 aa17.04■□□□□ 0.32
PPP3CA-201ENST00000323055 UNC93B1Q9H1C4 597 aa17.04■□□□□ 0.32
PPP3CA-201ENST00000323055 MTMR11A4FU01 709 aa17.03■□□□□ 0.32
PPP3CA-201ENST00000323055 TRAFD1O14545 582 aaPredicted RBP17.03■□□□□ 0.32
PPP3CA-201ENST00000323055 SNAP91O60641 907 aa17.03■□□□□ 0.32
PPP3CA-201ENST00000323055 ZNF623O75123 536 aa17.03■□□□□ 0.32
PPP3CA-201ENST00000323055 VPS4BO75351 444 aa17.03■□□□□ 0.32
PPP3CA-201ENST00000323055 CHI3L1P36222 383 aaPredicted RBP17.03■□□□□ 0.32
PPP3CA-201ENST00000323055 CACNA2D1P54289 1103 aa17.03■□□□□ 0.32
PPP3CA-201ENST00000323055 ZYG11AQ6WRX3 759 aa17.03■□□□□ 0.32
PPP3CA-201ENST00000323055 HPS6Q86YV9 775 aa17.03■□□□□ 0.32
PPP3CA-201ENST00000323055 ZNF557Q8N988 423 aaPredicted RBP17.03■□□□□ 0.32
PPP3CA-201ENST00000323055 TMEM79Q9BSE2 394 aa17.03■□□□□ 0.32
PPP3CA-201ENST00000323055 NTRK1P04629 796 aa17.03■□□□□ 0.32
PPP3CA-201ENST00000323055 HSPA13P48723 471 aa17.03■□□□□ 0.32
PPP3CA-201ENST00000323055 MAD2L1Q13257 205 aaPredicted RBP17.03■□□□□ 0.32
PPP3CA-201ENST00000323055 GPR17Q13304 367 aa17.03■□□□□ 0.32
PPP3CA-201ENST00000323055 TIGD2Q4W5G0 525 aa17.03■□□□□ 0.32
PPP3CA-201ENST00000323055 KIAA0930Q6ICG6 404 aaPredicted RBP17.03■□□□□ 0.32
PPP3CA-201ENST00000323055 RNF19BQ6ZMZ0 732 aa17.03■□□□□ 0.32
PPP3CA-201ENST00000323055 C11orf74Q86VG3 221 aa17.03■□□□□ 0.32
PPP3CA-201ENST00000323055 THAP11Q96EK4 314 aa17.03■□□□□ 0.32
PPP3CA-201ENST00000323055 YIPF2Q9BWQ6 316 aa17.03■□□□□ 0.32
PPP3CA-201ENST00000323055 CCDC162PA2VCL2 907 aa17.03■□□□□ 0.32
PPP3CA-201ENST00000323055 ITGB1P05556 798 aa17.03■□□□□ 0.32
PPP3CA-201ENST00000323055 GPR1P46091 355 aa17.03■□□□□ 0.32
PPP3CA-201ENST00000323055 NET1Q7Z628 596 aaPredicted RBP17.03■□□□□ 0.32
PPP3CA-201ENST00000323055 KREMEN2Q8NCW0 462 aa17.03■□□□□ 0.32
PPP3CA-201ENST00000323055 TRIM45Q9H8W5 580 aaPredicted RBP17.03■□□□□ 0.32
PPP3CA-201ENST00000323055 SCML2Q9UQR0 700 aa17.03■□□□□ 0.32
PPP3CA-201ENST00000323055 GLYATL1P3A0A0U1RQE8 302 aa17.02■□□□□ 0.32
PPP3CA-201ENST00000323055 SLC7A4O43246 635 aa17.02■□□□□ 0.32
PPP3CA-201ENST00000323055 ALFQ53S48 1182 aa17.02■□□□□ 0.32
PPP3CA-201ENST00000323055 UBXN11Q5T124 520 aa17.02■□□□□ 0.32
PPP3CA-201ENST00000323055 ADGRF1Q5T601 910 aa17.02■□□□□ 0.32
PPP3CA-201ENST00000323055 SYT12Q8IV01 421 aa17.02■□□□□ 0.32
PPP3CA-201ENST00000323055 MYOCQ99972 504 aa17.02■□□□□ 0.32
PPP3CA-201ENST00000323055 TCF25Q9BQ70 676 aa17.02■□□□□ 0.32
PPP3CA-201ENST00000323055 PDP2Q9P2J9 529 aa17.02■□□□□ 0.32
PPP3CA-201ENST00000323055 EGFL7Q9UHF1 273 aa17.02■□□□□ 0.32
PPP3CA-201ENST00000323055 hCG_2014768A0A024R1R8 64 aa17.02■□□□□ 0.32
PPP3CA-201ENST00000323055 C16orf96A6NNT2 1141 aa17.02■□□□□ 0.32
PPP3CA-201ENST00000323055 UBXN8O00124 270 aa17.02■□□□□ 0.32
PPP3CA-201ENST00000323055 RFX3P48380 749 aa17.02■□□□□ 0.32
PPP3CA-201ENST00000323055 OCA2Q04671 838 aa17.02■□□□□ 0.32
PPP3CA-201ENST00000323055 TSNQ15631 228 aaKnown RBP17.02■□□□□ 0.32
PPP3CA-201ENST00000323055 CAMK1DQ8IU85 385 aa17.02■□□□□ 0.32
PPP3CA-201ENST00000323055 ARFGAP1Q8N6T3 406 aa17.02■□□□□ 0.32
PPP3CA-201ENST00000323055 RIN3Q8TB24 985 aa17.02■□□□□ 0.32
PPP3CA-201ENST00000323055 TRMOQ9BU70 441 aa17.02■□□□□ 0.32
PPP3CA-201ENST00000323055 DENND2DQ9H6A0 471 aaPredicted RBP17.02■□□□□ 0.32
PPP3CA-201ENST00000323055 BLOC1S6Q9UL45 172 aa17.02■□□□□ 0.32
PPP3CA-201ENST00000323055 ARIH1Q9Y4X5 557 aaPredicted RBP17.02■□□□□ 0.32
PPP3CA-201ENST00000323055 SNX8Q9Y5X2 465 aa17.02■□□□□ 0.32
PPP3CA-201ENST00000323055 RBM47A0AV96 593 aaKnown RBP17.02■□□□□ 0.31
PPP3CA-201ENST00000323055 ENPP3O14638 875 aa17.02■□□□□ 0.31
PPP3CA-201ENST00000323055 ITM2AO43736 263 aa17.02■□□□□ 0.31
PPP3CA-201ENST00000323055 PEX1O43933 1283 aa17.02■□□□□ 0.31
PPP3CA-201ENST00000323055 AHSGP02765 367 aa17.02■□□□□ 0.31
PPP3CA-201ENST00000323055 SLC7A2P52569 658 aa17.02■□□□□ 0.31
PPP3CA-201ENST00000323055 MS4A13Q5J8X5 152 aa17.02■□□□□ 0.31
PPP3CA-201ENST00000323055 RINLQ6ZS11 566 aa17.02■□□□□ 0.31
PPP3CA-201ENST00000323055 P3H2Q8IVL5 708 aa17.02■□□□□ 0.31
PPP3CA-201ENST00000323055 CPNE9Q8IYJ1 553 aa17.02■□□□□ 0.31
PPP3CA-201ENST00000323055 MAGED4Q96JG8 741 aa17.02■□□□□ 0.31
PPP3CA-201ENST00000323055 CIDEBQ9UHD4 219 aa17.02■□□□□ 0.31
PPP3CA-201ENST00000323055 CD84Q9UIB8 345 aa17.02■□□□□ 0.31
PPP3CA-201ENST00000323055 KCTD3Q9Y597 815 aa17.02■□□□□ 0.31
PPP3CA-201ENST00000323055 IQCF5A8MTL0 148 aa17.02■□□□□ 0.31
PPP3CA-201ENST00000323055 PLCL1Q15111 1095 aa17.02■□□□□ 0.31
PPP3CA-201ENST00000323055 GRAMD4Q6IC98 578 aa17.02■□□□□ 0.31
PPP3CA-201ENST00000323055 STK32CQ86UX6 486 aa17.02■□□□□ 0.31
PPP3CA-201ENST00000323055 CHPFQ8IZ52 775 aa17.02■□□□□ 0.31
PPP3CA-201ENST00000323055 C10orf82Q8WW14 230 aa17.02■□□□□ 0.31
PPP3CA-201ENST00000323055 SMG7Q92540 1137 aaKnown RBP17.02■□□□□ 0.31
PPP3CA-201ENST00000323055 DACT3Q96B18 629 aaPredicted RBP17.02■□□□□ 0.31
PPP3CA-201ENST00000323055 C8orf48Q96LL4 319 aa17.02■□□□□ 0.31
PPP3CA-201ENST00000323055 CLIC5Q9NZA1 410 aa17.02■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms