RNA–Protein interactions for RNA: ENST00000320578.2

RAB39A-201, Transcript of RAB39A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39A, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39A-201ENST00000320578 ZNF549Q6P9A3 640 aa17.82■□□□□ 0.44
RAB39A-201ENST00000320578 CERS6Q6ZMG9 384 aa17.82■□□□□ 0.44
RAB39A-201ENST00000320578 LDB1Q86U70 411 aaPredicted RBP17.82■□□□□ 0.44
RAB39A-201ENST00000320578 TNS4Q8IZW8 715 aa17.82■□□□□ 0.44
RAB39A-201ENST00000320578 STK40Q8N2I9 435 aa17.82■□□□□ 0.44
RAB39A-201ENST00000320578 FGF13Q92913 245 aa17.82■□□□□ 0.44
RAB39A-201ENST00000320578 NXNL1Q96CM4 212 aa17.82■□□□□ 0.44
RAB39A-201ENST00000320578 RSPRY1Q96DX4 576 aa17.82■□□□□ 0.44
RAB39A-201ENST00000320578 RMDN2Q96LZ7 410 aa17.82■□□□□ 0.44
RAB39A-201ENST00000320578 MCCC1Q96RQ3 725 aaPredicted RBP17.82■□□□□ 0.44
RAB39A-201ENST00000320578 NDNQ99608 321 aa17.82■□□□□ 0.44
RAB39A-201ENST00000320578 FAM96AQ9H5X1 160 aa17.82■□□□□ 0.44
RAB39A-201ENST00000320578 GPAMQ9HCL2 828 aa17.82■□□□□ 0.44
RAB39A-201ENST00000320578 FKBPLQ9UIM3 349 aa17.82■□□□□ 0.44
RAB39A-201ENST00000320578 SLC8A2Q9UPR5 921 aa17.82■□□□□ 0.44
RAB39A-201ENST00000320578 NDUFS3O75489 264 aa17.81■□□□□ 0.44
RAB39A-201ENST00000320578 GMPRP36959 345 aa17.81■□□□□ 0.44
RAB39A-201ENST00000320578 CCNHP51946 323 aaPredicted RBP17.81■□□□□ 0.44
RAB39A-201ENST00000320578 CACNG1Q06432 222 aa17.81■□□□□ 0.44
RAB39A-201ENST00000320578 DLG1Q12959 904 aa17.81■□□□□ 0.44
RAB39A-201ENST00000320578 SETDB1Q15047 1291 aa17.81■□□□□ 0.44
RAB39A-201ENST00000320578 PDGFRLQ15198 375 aa17.81■□□□□ 0.44
RAB39A-201ENST00000320578 TMEM215Q68D42 235 aa17.81■□□□□ 0.44
RAB39A-201ENST00000320578 KLC3Q6P597 504 aa17.81■□□□□ 0.44
RAB39A-201ENST00000320578 LYSMD3Q7Z3D4 306 aa17.81■□□□□ 0.44
RAB39A-201ENST00000320578 RYBPQ8N488 228 aaPredicted RBP17.81■□□□□ 0.44
RAB39A-201ENST00000320578 OR6K2Q8NGY2 324 aa17.81■□□□□ 0.44
RAB39A-201ENST00000320578 SCRN2Q96FV2 425 aa17.81■□□□□ 0.44
RAB39A-201ENST00000320578 MRGPRX3Q96LB0 322 aa17.81■□□□□ 0.44
RAB39A-201ENST00000320578 SMIM14Q96QK8 99 aa17.81■□□□□ 0.44
RAB39A-201ENST00000320578 KCNK13Q9HB14 408 aa17.81■□□□□ 0.44
RAB39A-201ENST00000320578 SLCO3A1Q9UIG8 710 aa17.81■□□□□ 0.44
RAB39A-201ENST00000320578 APPL1Q9UKG1 709 aa17.81■□□□□ 0.44
RAB39A-201ENST00000320578 CCDC189A1A4V9 331 aa17.8■□□□□ 0.44
RAB39A-201ENST00000320578 EPOPA6NHQ4 379 aa17.8■□□□□ 0.44
RAB39A-201ENST00000320578 HNF1BP35680 557 aa17.8■□□□□ 0.44
RAB39A-201ENST00000320578 PPARGP37231 505 aaPredicted RBP17.8■□□□□ 0.44
RAB39A-201ENST00000320578 DGKGP49619 791 aa17.8■□□□□ 0.44
RAB39A-201ENST00000320578 ARFIP2P53365 341 aa17.8■□□□□ 0.44
RAB39A-201ENST00000320578 CDKN2DP55273 166 aa17.8■□□□□ 0.44
RAB39A-201ENST00000320578 ABCE1P61221 599 aaKnown RBP17.8■□□□□ 0.44
RAB39A-201ENST00000320578 OVGP1Q12889 678 aa17.8■□□□□ 0.44
RAB39A-201ENST00000320578 ZNF460Q14592 562 aa17.8■□□□□ 0.44
RAB39A-201ENST00000320578 RARS2Q5T160 578 aaKnown RBP17.8■□□□□ 0.44
RAB39A-201ENST00000320578 LIPMQ5VYY2 423 aa17.8■□□□□ 0.44
RAB39A-201ENST00000320578 DPY19L3Q6ZPD9 716 aa17.8■□□□□ 0.44
RAB39A-201ENST00000320578 TPRG1Q6ZUI0 275 aa17.8■□□□□ 0.44
RAB39A-201ENST00000320578 ETFBKMTQ8IXQ9 262 aa17.8■□□□□ 0.44
RAB39A-201ENST00000320578 KDM1BQ8NB78 822 aa17.8■□□□□ 0.44
RAB39A-201ENST00000320578 GRIN3AQ8TCU5 1115 aa17.8■□□□□ 0.44
RAB39A-201ENST00000320578 HCAR2Q8TDS4 363 aa17.8■□□□□ 0.44
RAB39A-201ENST00000320578 PPP4R1Q8TF05 950 aa17.8■□□□□ 0.44
RAB39A-201ENST00000320578 FRS2Q8WU20 508 aa17.8■□□□□ 0.44
RAB39A-201ENST00000320578 HEXDCQ8WVB3 486 aa17.8■□□□□ 0.44
RAB39A-201ENST00000320578 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.8■□□□□ 0.44
RAB39A-201ENST00000320578 EID2BQ96D98 161 aa17.8■□□□□ 0.44
RAB39A-201ENST00000320578 CCDC126Q96EE4 140 aa17.8■□□□□ 0.44
RAB39A-201ENST00000320578 LRIG1Q96JA1 1093 aa17.8■□□□□ 0.44
RAB39A-201ENST00000320578 SCYL1Q96KG9 808 aa17.8■□□□□ 0.44
RAB39A-201ENST00000320578 STN1Q9H668 368 aaKnown RBP17.8■□□□□ 0.44
RAB39A-201ENST00000320578 ABCF3Q9NUQ8 709 aa17.8■□□□□ 0.44
RAB39A-201ENST00000320578 THG1LQ9NWX6 298 aaKnown RBP17.8■□□□□ 0.44
RAB39A-201ENST00000320578 CRYL1Q9Y2S2 319 aa17.8■□□□□ 0.44
RAB39A-201ENST00000320578 ANKRD36A6QL64 1941 aa17.8■□□□□ 0.44
RAB39A-201ENST00000320578 CTPS1P17812 591 aa17.79■□□□□ 0.44
RAB39A-201ENST00000320578 VIPR2P41587 438 aa17.79■□□□□ 0.44
RAB39A-201ENST00000320578 PTGER3P43115 390 aa17.79■□□□□ 0.44
RAB39A-201ENST00000320578 RECQLP46063 649 aaPredicted RBP17.79■□□□□ 0.44
RAB39A-201ENST00000320578 DNAJB13P59910 316 aa17.79■□□□□ 0.44
RAB39A-201ENST00000320578 POLR2LP62875 67 aaKnown RBP17.79■□□□□ 0.44
RAB39A-201ENST00000320578 TIAL1Q01085 375 aaKnown RBP eCLIP17.79■□□□□ 0.44
RAB39A-201ENST00000320578 SF3A3Q12874 501 aaKnown RBP eCLIP17.79■□□□□ 0.44
RAB39A-201ENST00000320578 ITGA9Q13797 1035 aa17.79■□□□□ 0.44
RAB39A-201ENST00000320578 ACCSLQ4AC99 568 aa17.79■□□□□ 0.44
RAB39A-201ENST00000320578 LYPLAL1Q5VWZ2 237 aa17.79■□□□□ 0.44
RAB39A-201ENST00000320578 FITM2Q8N6M3 262 aa17.79■□□□□ 0.44
RAB39A-201ENST00000320578 OR2A12Q8NGT7 310 aa17.79■□□□□ 0.44
RAB39A-201ENST00000320578 RFWD2Q8NHY2 731 aa17.79■□□□□ 0.44
RAB39A-201ENST00000320578 LRRC37BQ96QE4 947 aa17.79■□□□□ 0.44
RAB39A-201ENST00000320578 FAM83CQ9BQN1 747 aa17.79■□□□□ 0.44
RAB39A-201ENST00000320578 C20orf27Q9GZN8 174 aa17.79■□□□□ 0.44
RAB39A-201ENST00000320578 SYTL2Q9HCH5 934 aa17.79■□□□□ 0.44
RAB39A-201ENST00000320578 XPR1Q9UBH6 696 aa17.79■□□□□ 0.44
RAB39A-201ENST00000320578 SLC30A1Q9Y6M5 507 aa17.79■□□□□ 0.44
RAB39A-201ENST00000320578 ATG2AQ2TAZ0 1938 aa17.79■□□□□ 0.44
RAB39A-201ENST00000320578 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.79■□□□□ 0.44
RAB39A-201ENST00000320578 DNAJC6O75061 913 aa17.79■□□□□ 0.44
RAB39A-201ENST00000320578 ALPIP09923 528 aa17.79■□□□□ 0.44
RAB39A-201ENST00000320578 GKP32189 559 aa17.79■□□□□ 0.44
RAB39A-201ENST00000320578 SERPINB5P36952 375 aa17.79■□□□□ 0.44
RAB39A-201ENST00000320578 GEN1Q17RS7 908 aa17.79■□□□□ 0.44
RAB39A-201ENST00000320578 TECRLQ5HYJ1 363 aa17.79■□□□□ 0.44
RAB39A-201ENST00000320578 ZDHHC20Q5W0Z9 365 aa17.79■□□□□ 0.44
RAB39A-201ENST00000320578 GRAMD4Q6IC98 578 aa17.79■□□□□ 0.44
RAB39A-201ENST00000320578 ANKRD54Q6NXT1 300 aa17.79■□□□□ 0.44
RAB39A-201ENST00000320578 BRAT1Q6PJG6 821 aa17.79■□□□□ 0.44
RAB39A-201ENST00000320578 ZCCHC23Q6ZST2 131 aa17.79■□□□□ 0.44
RAB39A-201ENST00000320578 USP45Q70EL2 814 aa17.79■□□□□ 0.44
RAB39A-201ENST00000320578 WDR75Q8IWA0 830 aaKnown RBP17.79■□□□□ 0.44
RAB39A-201ENST00000320578 PIWIL2Q8TC59 973 aaKnown RBP17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms