RNA–Protein interactions for RNA: ENST00000317868.8

ATG4C-201, Transcript of autophagy related 4C cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4C, Length 2,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4C-201ENST00000317868 OR4L1Q8NH43 312 aa13.78□□□□□ -0.2
ATG4C-201ENST00000317868 C19orf60Q96EN9 201 aa13.78□□□□□ -0.2
ATG4C-201ENST00000317868 CEP295NLQ96MC4 621 aa13.78□□□□□ -0.2
ATG4C-201ENST00000317868 PSKH2Q96QS6 385 aa13.78□□□□□ -0.2
ATG4C-201ENST00000317868 TSEN34Q9BSV6 310 aaKnown RBP13.78□□□□□ -0.2
ATG4C-201ENST00000317868 CATSPERZQ9NTU4 200 aa13.78□□□□□ -0.2
ATG4C-201ENST00000317868 DNAJC15Q9Y5T4 150 aa13.78□□□□□ -0.2
ATG4C-201ENST00000317868 DNAJA2O60884 412 aa13.77□□□□□ -0.2
ATG4C-201ENST00000317868 CDK14O94921 469 aa13.77□□□□□ -0.2
ATG4C-201ENST00000317868 GRIA2P42262 883 aa13.77□□□□□ -0.2
ATG4C-201ENST00000317868 MRPL19P49406 292 aaKnown RBP13.77□□□□□ -0.2
ATG4C-201ENST00000317868 KCNQ1P51787 676 aa13.77□□□□□ -0.2
ATG4C-201ENST00000317868 ZNF235Q14590 738 aa13.77□□□□□ -0.2
ATG4C-201ENST00000317868 PDK3Q15120 406 aa13.77□□□□□ -0.2
ATG4C-201ENST00000317868 C6orf10Q5SRN2 563 aa13.77□□□□□ -0.2
ATG4C-201ENST00000317868 CLEC6AQ6EIG7 209 aa13.77□□□□□ -0.2
ATG4C-201ENST00000317868 PIP4K2CQ8TBX8 421 aa13.77□□□□□ -0.2
ATG4C-201ENST00000317868 NCSTNQ92542 709 aa13.77□□□□□ -0.2
ATG4C-201ENST00000317868 TMA16Q96EY4 203 aaKnown RBP13.77□□□□□ -0.2
ATG4C-201ENST00000317868 CDKN2AIPNLQ96HQ2 116 aa13.77□□□□□ -0.2
ATG4C-201ENST00000317868 UHRF1Q96T88 793 aaPredicted RBP13.77□□□□□ -0.2
ATG4C-201ENST00000317868 SLC25A23Q9BV35 468 aa13.77□□□□□ -0.2
ATG4C-201ENST00000317868 C1QTNF3Q9BXJ4 246 aa13.77□□□□□ -0.2
ATG4C-201ENST00000317868 PIDD1Q9HB75 910 aa13.77□□□□□ -0.2
ATG4C-201ENST00000317868 MRPL40Q9NQ50 206 aaKnown RBP13.77□□□□□ -0.2
ATG4C-201ENST00000317868 TCRBV3S1A0A5B6 114 aa13.77□□□□□ -0.21
ATG4C-201ENST00000317868 HMBSP08397 361 aa13.77□□□□□ -0.21
ATG4C-201ENST00000317868 SNRPB2P08579 225 aaKnown RBP13.77□□□□□ -0.21
ATG4C-201ENST00000317868 SERPINF2P08697 491 aa13.77□□□□□ -0.21
ATG4C-201ENST00000317868 SMIM18P0DKX4 95 aa13.77□□□□□ -0.21
ATG4C-201ENST00000317868 MSX2P35548 267 aaPredicted RBP13.77□□□□□ -0.21
ATG4C-201ENST00000317868 SLC11A1P49279 550 aa13.77□□□□□ -0.21
ATG4C-201ENST00000317868 RARS2Q5T160 578 aaKnown RBP13.77□□□□□ -0.21
ATG4C-201ENST00000317868 FUT10Q6P4F1 479 aa13.77□□□□□ -0.21
ATG4C-201ENST00000317868 PAOXQ6QHF9 649 aa13.77□□□□□ -0.21
ATG4C-201ENST00000317868 CLYBLQ8N0X4 340 aa13.77□□□□□ -0.21
ATG4C-201ENST00000317868 BLOC1S5Q8TDH9 187 aa13.77□□□□□ -0.21
ATG4C-201ENST00000317868 LPGAT1Q92604 370 aa13.77□□□□□ -0.21
ATG4C-201ENST00000317868 PRICKLE1Q96MT3 831 aaPredicted RBP13.77□□□□□ -0.21
ATG4C-201ENST00000317868 PKP2Q99959 881 aa13.77□□□□□ -0.21
ATG4C-201ENST00000317868 GPATCH1Q9BRR8 931 aaKnown RBP13.77□□□□□ -0.21
ATG4C-201ENST00000317868 DERL2Q9GZP9 239 aa13.77□□□□□ -0.21
ATG4C-201ENST00000317868 SLC38A8A6NNN8 435 aa13.77□□□□□ -0.21
ATG4C-201ENST00000317868 F5H5T6 163 aa13.77□□□□□ -0.21
ATG4C-201ENST00000317868 CFLARO15519 480 aa13.77□□□□□ -0.21
ATG4C-201ENST00000317868 KLK8O60259 260 aa13.77□□□□□ -0.21
ATG4C-201ENST00000317868 ACSL4O60488 711 aa13.77□□□□□ -0.21
ATG4C-201ENST00000317868 SMIM24O75264 130 aa13.77□□□□□ -0.21
ATG4C-201ENST00000317868 SUPT7LO94864 414 aa13.77□□□□□ -0.21
ATG4C-201ENST00000317868 PRLP01236 227 aa13.77□□□□□ -0.21
ATG4C-201ENST00000317868 F11P03951 625 aa13.77□□□□□ -0.21
ATG4C-201ENST00000317868 CD9P21926 228 aa13.77□□□□□ -0.21
ATG4C-201ENST00000317868 RGRP47804 291 aa13.77□□□□□ -0.21
ATG4C-201ENST00000317868 GNA12Q03113 381 aa13.77□□□□□ -0.21
ATG4C-201ENST00000317868 MGAT5BQ3V5L5 792 aa13.77□□□□□ -0.21
ATG4C-201ENST00000317868 MMEL1Q495T6 779 aa13.77□□□□□ -0.21
ATG4C-201ENST00000317868 RNF148Q8N7C7 305 aa13.77□□□□□ -0.21
ATG4C-201ENST00000317868 KIAA1191Q96A73 305 aa13.77□□□□□ -0.21
ATG4C-201ENST00000317868 FIS1Q9Y3D6 152 aa13.77□□□□□ -0.21
ATG4C-201ENST00000317868 SPO11Q9Y5K1 396 aa13.77□□□□□ -0.21
ATG4C-201ENST00000317868 ACTL7AQ9Y615 435 aa13.77□□□□□ -0.21
ATG4C-201ENST00000317868 PRORSD1PA6NEY8 169 aa13.76□□□□□ -0.21
ATG4C-201ENST00000317868 ENPP3O14638 875 aa13.76□□□□□ -0.21
ATG4C-201ENST00000317868 KDELR3O43731 214 aa13.76□□□□□ -0.21
ATG4C-201ENST00000317868 NBNO60934 754 aa13.76□□□□□ -0.21
ATG4C-201ENST00000317868 KERAO60938 352 aa13.76□□□□□ -0.21
ATG4C-201ENST00000317868 HDCP19113 662 aa13.76□□□□□ -0.21
ATG4C-201ENST00000317868 CHN2P52757 468 aa13.76□□□□□ -0.21
ATG4C-201ENST00000317868 CDH4P55283 916 aa13.76□□□□□ -0.21
ATG4C-201ENST00000317868 GRAMD1BQ3KR37 738 aa13.76□□□□□ -0.21
ATG4C-201ENST00000317868 USP41Q3LFD5 358 aa13.76□□□□□ -0.21
ATG4C-201ENST00000317868 AGKQ53H12 422 aa13.76□□□□□ -0.21
ATG4C-201ENST00000317868 KLHDC10Q6PID8 442 aa13.76□□□□□ -0.21
ATG4C-201ENST00000317868 LGI2Q8N0V4 545 aa13.76□□□□□ -0.21
ATG4C-201ENST00000317868 PTGR2Q8N8N7 351 aaPredicted RBP13.76□□□□□ -0.21
ATG4C-201ENST00000317868 GLT1D1Q96MS3 346 aa13.76□□□□□ -0.21
ATG4C-201ENST00000317868 CDK5RAP1Q96SZ6 601 aaKnown RBP13.76□□□□□ -0.21
ATG4C-201ENST00000317868 TSC22D3Q99576 134 aa13.76□□□□□ -0.21
ATG4C-201ENST00000317868 EPB41L1Q9H4G0 881 aa13.76□□□□□ -0.21
ATG4C-201ENST00000317868 SPAG4Q9NPE6 437 aa13.76□□□□□ -0.21
ATG4C-201ENST00000317868 SLC52A3Q9NQ40 469 aa13.76□□□□□ -0.21
ATG4C-201ENST00000317868 ABCD2Q9UBJ2 740 aa13.76□□□□□ -0.21
ATG4C-201ENST00000317868 IKZF3Q9UKT9 509 aa13.76□□□□□ -0.21
ATG4C-201ENST00000317868 A0A1W2PQ45 241 aaPredicted RBP13.76□□□□□ -0.21
ATG4C-201ENST00000317868 A0A1W2PQY0 241 aa13.76□□□□□ -0.21
ATG4C-201ENST00000317868 BBIP1A8MTZ0 92 aa13.76□□□□□ -0.21
ATG4C-201ENST00000317868 NRP2O60462 931 aa13.76□□□□□ -0.21
ATG4C-201ENST00000317868 RNASEH2AO75792 299 aaKnown RBP13.76□□□□□ -0.21
ATG4C-201ENST00000317868 PRR35P0CG20 571 aa13.76□□□□□ -0.21
ATG4C-201ENST00000317868 RHDQ02161 417 aa13.76□□□□□ -0.21
ATG4C-201ENST00000317868 PDAP1Q13442 181 aaKnown RBP13.76□□□□□ -0.21
ATG4C-201ENST00000317868 ZNF354CQ86Y25 554 aa13.76□□□□□ -0.21
ATG4C-201ENST00000317868 FAM156AQ8NDB6 213 aa13.76□□□□□ -0.21
ATG4C-201ENST00000317868 MDGA1Q8NFP4 955 aa13.76□□□□□ -0.21
ATG4C-201ENST00000317868 OVCA2Q8WZ82 227 aa13.76□□□□□ -0.21
ATG4C-201ENST00000317868 SLCO4A1Q96BD0 722 aa13.76□□□□□ -0.21
ATG4C-201ENST00000317868 ROPN1LQ96C74 230 aa13.76□□□□□ -0.21
ATG4C-201ENST00000317868 GCNAQ96QF7 691 aa13.76□□□□□ -0.21
ATG4C-201ENST00000317868 SEPT5Q99719 369 aaPredicted RBP13.76□□□□□ -0.21
ATG4C-201ENST00000317868 SLC2A11Q9BYW1 496 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms