RNA–Protein interactions for RNA: ENST00000312579.3

CCDC85B-201, Transcript of coiled-coil domain containing 85B, humanhuman

APPRIS P1 BASIC

Gene CCDC85B, Length 1,524 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85B-201ENST00000312579 FBXO36Q8NEA4 188 aa22.4■■□□□ 1.18
CCDC85B-201ENST00000312579 MFSD3Q96ES6 412 aa22.4■■□□□ 1.18
CCDC85B-201ENST00000312579 STAMBPL1Q96FJ0 436 aa22.4■■□□□ 1.18
CCDC85B-201ENST00000312579 CFAP36Q96G28 342 aa22.4■■□□□ 1.18
CCDC85B-201ENST00000312579 DNAJC1Q96KC8 554 aaKnown RBP22.4■■□□□ 1.18
CCDC85B-201ENST00000312579 C9orf72Q96LT7 481 aa22.4■■□□□ 1.18
CCDC85B-201ENST00000312579 RANBP9Q96S59 729 aa22.4■■□□□ 1.18
CCDC85B-201ENST00000312579 EBNA1BP2Q99848 306 aaKnown RBP22.4■■□□□ 1.18
CCDC85B-201ENST00000312579 TRABDQ9H4I3 376 aa22.4■■□□□ 1.18
CCDC85B-201ENST00000312579 C6orf106Q9H6K1 298 aaPredicted RBP22.4■■□□□ 1.18
CCDC85B-201ENST00000312579 SAMD15Q9P1V8 674 aa22.4■■□□□ 1.18
CCDC85B-201ENST00000312579 CD84Q9UIB8 345 aa22.4■■□□□ 1.18
CCDC85B-201ENST00000312579 SOX13Q9UN79 622 aa22.4■■□□□ 1.18
CCDC85B-201ENST00000312579 KMT2EQ8IZD2 1858 aa22.39■■□□□ 1.18
CCDC85B-201ENST00000312579 LRRK1Q38SD2 2015 aa22.39■■□□□ 1.18
CCDC85B-201ENST00000312579 C2orf81A6NN90 581 aa22.39■■□□□ 1.17
CCDC85B-201ENST00000312579 EIF3HO15372 352 aaKnown RBP eCLIP22.39■■□□□ 1.17
CCDC85B-201ENST00000312579 CRTAMO95727 393 aa22.39■■□□□ 1.17
CCDC85B-201ENST00000312579 BCKDHBP21953 392 aa22.39■■□□□ 1.17
CCDC85B-201ENST00000312579 LPOP22079 712 aaPredicted RBP22.39■■□□□ 1.17
CCDC85B-201ENST00000312579 OXTRP30559 389 aa22.39■■□□□ 1.17
CCDC85B-201ENST00000312579 ZNF140P52738 457 aaPredicted RBP22.39■■□□□ 1.17
CCDC85B-201ENST00000312579 SRSF5Q13243 272 aaKnown RBP22.39■■□□□ 1.17
CCDC85B-201ENST00000312579 FGL2Q14314 439 aa22.39■■□□□ 1.17
CCDC85B-201ENST00000312579 TSTD2Q5T7W7 516 aa22.39■■□□□ 1.17
CCDC85B-201ENST00000312579 ESRP1Q6NXG1 681 aaKnown RBP22.39■■□□□ 1.17
CCDC85B-201ENST00000312579 LRIG3Q6UXM1 1119 aa22.39■■□□□ 1.17
CCDC85B-201ENST00000312579 Q6ZVL8 140 aa22.39■■□□□ 1.17
CCDC85B-201ENST00000312579 CBARPQ8N350 705 aaPredicted RBP22.39■■□□□ 1.17
CCDC85B-201ENST00000312579 OR2T34Q8NGX1 318 aa22.39■■□□□ 1.17
CCDC85B-201ENST00000312579 FCRL3Q96P31 734 aaPredicted RBP22.39■■□□□ 1.17
CCDC85B-201ENST00000312579 KIFC1Q9BW19 673 aa22.39■■□□□ 1.17
CCDC85B-201ENST00000312579 PLAC1Q9HBJ0 212 aa22.39■■□□□ 1.17
CCDC85B-201ENST00000312579 PREBQ9HCU5 417 aa22.39■■□□□ 1.17
CCDC85B-201ENST00000312579 IL17CQ9P0M4 197 aa22.39■■□□□ 1.17
CCDC85B-201ENST00000312579 PRR33A8MZF0 331 aa22.38■■□□□ 1.17
CCDC85B-201ENST00000312579 RIPK2O43353 540 aa22.38■■□□□ 1.17
CCDC85B-201ENST00000312579 ZNF30P17039 623 aa22.38■■□□□ 1.17
CCDC85B-201ENST00000312579 HMGCLP35914 325 aa22.38■■□□□ 1.17
CCDC85B-201ENST00000312579 MAGEA4P43358 317 aa22.38■■□□□ 1.17
CCDC85B-201ENST00000312579 ARSDP51689 593 aa22.38■■□□□ 1.17
CCDC85B-201ENST00000312579 USP39Q53GS9 565 aaKnown RBP22.38■■□□□ 1.17
CCDC85B-201ENST00000312579 CAPN12Q6ZSI9 719 aa22.38■■□□□ 1.17
CCDC85B-201ENST00000312579 ZBTB9Q96C00 473 aa22.38■■□□□ 1.17
CCDC85B-201ENST00000312579 COQ10AQ96MF6 247 aa22.38■■□□□ 1.17
CCDC85B-201ENST00000312579 SRPK1Q96SB4 655 aaKnown RBP22.38■■□□□ 1.17
CCDC85B-201ENST00000312579 EPB41L4BQ9H329 900 aa22.38■■□□□ 1.17
CCDC85B-201ENST00000312579 NINJ2Q9NZG7 142 aa22.38■■□□□ 1.17
CCDC85B-201ENST00000312579 DOCK9Q9BZ29 2069 aa22.38■■□□□ 1.17
CCDC85B-201ENST00000312579 LRRC72A6NJI9 287 aa22.37■■□□□ 1.17
CCDC85B-201ENST00000312579 H0Y858 1186 aa22.37■■□□□ 1.17
CCDC85B-201ENST00000312579 STX7O15400 261 aaKnown RBP22.37■■□□□ 1.17
CCDC85B-201ENST00000312579 LZTS3O60299 673 aaPredicted RBP22.37■■□□□ 1.17
CCDC85B-201ENST00000312579 RECQL5O94762 991 aaPredicted RBP22.37■■□□□ 1.17
CCDC85B-201ENST00000312579 BPIP17213 487 aa22.37■■□□□ 1.17
CCDC85B-201ENST00000312579 SPINT3P49223 89 aa22.37■■□□□ 1.17
CCDC85B-201ENST00000312579 ANGPT1Q15389 498 aa22.37■■□□□ 1.17
CCDC85B-201ENST00000312579 WDR5BQ86VZ2 330 aa22.37■■□□□ 1.17
CCDC85B-201ENST00000312579 OR13J1Q8NGT2 312 aa22.37■■□□□ 1.17
CCDC85B-201ENST00000312579 ZNF669Q96BR6 464 aaPredicted RBP22.37■■□□□ 1.17
CCDC85B-201ENST00000312579 SUDS3Q9H7L9 328 aaPredicted RBP22.37■■□□□ 1.17
CCDC85B-201ENST00000312579 IL1RAPL1Q9NZN1 696 aa22.37■■□□□ 1.17
CCDC85B-201ENST00000312579 ZC3H7BQ9UGR2 993 aaKnown RBP22.37■■□□□ 1.17
CCDC85B-201ENST00000312579 DYNC1LI1Q9Y6G9 523 aaKnown RBP22.37■■□□□ 1.17
CCDC85B-201ENST00000312579 RPS21P63220 83 aaKnown RBP22.36■■□□□ 1.17
CCDC85B-201ENST00000312579 CBLBQ13191 982 aa22.36■■□□□ 1.17
CCDC85B-201ENST00000312579 ZNF284Q2VY69 593 aa22.36■■□□□ 1.17
CCDC85B-201ENST00000312579 ANKRD20A4Q4UJ75 823 aa22.36■■□□□ 1.17
CCDC85B-201ENST00000312579 TMEM259Q4ZIN3 620 aa22.36■■□□□ 1.17
CCDC85B-201ENST00000312579 HSP90B2PQ58FF3 399 aa22.36■■□□□ 1.17
CCDC85B-201ENST00000312579 TECPR1Q7Z6L1 1165 aa22.36■■□□□ 1.17
CCDC85B-201ENST00000312579 LONP2Q86WA8 852 aa22.36■■□□□ 1.17
CCDC85B-201ENST00000312579 HORMAD1Q86X24 394 aa22.36■■□□□ 1.17
CCDC85B-201ENST00000312579 GPR26Q8NDV2 337 aa22.36■■□□□ 1.17
CCDC85B-201ENST00000312579 PYROXD1Q8WU10 500 aa22.36■■□□□ 1.17
CCDC85B-201ENST00000312579 STYXQ8WUJ0 223 aa22.36■■□□□ 1.17
CCDC85B-201ENST00000312579 SCAMP4Q969E2 229 aa22.36■■□□□ 1.17
CCDC85B-201ENST00000312579 TBATAQ96M53 351 aa22.36■■□□□ 1.17
CCDC85B-201ENST00000312579 TTC25Q96NG3 672 aa22.36■■□□□ 1.17
CCDC85B-201ENST00000312579 KDM4CQ9H3R0 1056 aa22.36■■□□□ 1.17
CCDC85B-201ENST00000312579 TREX1Q9NSU2 369 aa22.36■■□□□ 1.17
CCDC85B-201ENST00000312579 FAM53CQ9NYF3 392 aa22.36■■□□□ 1.17
CCDC85B-201ENST00000312579 FKBPLQ9UIM3 349 aa22.36■■□□□ 1.17
CCDC85B-201ENST00000312579 FBXO4Q9UKT5 387 aa22.36■■□□□ 1.17
CCDC85B-201ENST00000312579 PKP3Q9Y446 797 aa22.36■■□□□ 1.17
CCDC85B-201ENST00000312579 RPS6KL1Q9Y6S9 549 aa22.36■■□□□ 1.17
CCDC85B-201ENST00000312579 TRPM6Q9BX84 2022 aa22.36■■□□□ 1.17
CCDC85B-201ENST00000312579 FAM237BA0A1B0GVD1 139 aa22.36■■□□□ 1.17
CCDC85B-201ENST00000312579 OR51F1A6NGY5 319 aa22.36■■□□□ 1.17
CCDC85B-201ENST00000312579 AGPSO00116 658 aa22.36■■□□□ 1.17
CCDC85B-201ENST00000312579 TM7SF2O76062 418 aa22.36■■□□□ 1.17
CCDC85B-201ENST00000312579 FSBPO95073 299 aa22.36■■□□□ 1.17
CCDC85B-201ENST00000312579 ACSL3O95573 720 aa22.36■■□□□ 1.17
CCDC85B-201ENST00000312579 TTC4O95801 387 aa22.36■■□□□ 1.17
CCDC85B-201ENST00000312579 PAK4O96013 591 aaPredicted RBP22.36■■□□□ 1.17
CCDC85B-201ENST00000312579 NUDT17P0C025 328 aa22.36■■□□□ 1.17
CCDC85B-201ENST00000312579 PGAM1P18669 254 aa22.36■■□□□ 1.17
CCDC85B-201ENST00000312579 IFFO1Q0D2I5 559 aa22.36■■□□□ 1.17
CCDC85B-201ENST00000312579 SLC29A2Q14542 456 aa22.36■■□□□ 1.17
CCDC85B-201ENST00000312579 KYNUQ16719 465 aa22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms