RNA–Protein interactions for RNA: ENST00000312438.7

CLCF1-201, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCF1, Length 1,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-201ENST00000312438 TTPAP49638 278 aa16.7■□□□□ 0.26
CLCF1-201ENST00000312438 PRKAA2P54646 552 aa16.7■□□□□ 0.26
CLCF1-201ENST00000312438 CDKN2DP55273 166 aa16.7■□□□□ 0.26
CLCF1-201ENST00000312438 DLG1Q12959 904 aa16.7■□□□□ 0.26
CLCF1-201ENST00000312438 PEX6Q13608 980 aa16.7■□□□□ 0.26
CLCF1-201ENST00000312438 CDKN3Q16667 212 aa16.7■□□□□ 0.26
CLCF1-201ENST00000312438 AARS2Q5JTZ9 985 aaKnown RBP16.7■□□□□ 0.26
CLCF1-201ENST00000312438 AGAP9Q5VTM2 703 aa16.7■□□□□ 0.26
CLCF1-201ENST00000312438 CES4AQ5XG92 561 aa16.7■□□□□ 0.26
CLCF1-201ENST00000312438 LRRC8EQ6NSJ5 796 aa16.7■□□□□ 0.26
CLCF1-201ENST00000312438 ZNF549Q6P9A3 640 aa16.7■□□□□ 0.26
CLCF1-201ENST00000312438 ZYG11AQ6WRX3 759 aa16.7■□□□□ 0.26
CLCF1-201ENST00000312438 ZCCHC23Q6ZST2 131 aa16.7■□□□□ 0.26
CLCF1-201ENST00000312438 GET4Q7L5D6 327 aaPredicted RBP16.7■□□□□ 0.26
CLCF1-201ENST00000312438 OR6Y1Q8NGX8 325 aa16.7■□□□□ 0.26
CLCF1-201ENST00000312438 SCRN2Q96FV2 425 aa16.7■□□□□ 0.26
CLCF1-201ENST00000312438 UBXN10Q96LJ8 280 aa16.7■□□□□ 0.26
CLCF1-201ENST00000312438 LYSMD1Q96S90 227 aa16.7■□□□□ 0.26
CLCF1-201ENST00000312438 MRPL57Q9BQC6 102 aaKnown RBP16.7■□□□□ 0.26
CLCF1-201ENST00000312438 LAMA2P24043 3122 aaKnown RBP16.7■□□□□ 0.26
CLCF1-201ENST00000312438 A0A0U1RQS6 177 aa16.7■□□□□ 0.26
CLCF1-201ENST00000312438 C1orf232A0A0U1RR37 186 aa16.7■□□□□ 0.26
CLCF1-201ENST00000312438 CAPN8A6NHC0 703 aa16.7■□□□□ 0.26
CLCF1-201ENST00000312438 TARM1B6A8C7 271 aa16.7■□□□□ 0.26
CLCF1-201ENST00000312438 ASLP04424 464 aa16.7■□□□□ 0.26
CLCF1-201ENST00000312438 SRPRAP08240 638 aaKnown RBP16.7■□□□□ 0.26
CLCF1-201ENST00000312438 FDXRP22570 491 aa16.7■□□□□ 0.26
CLCF1-201ENST00000312438 GLRBP48167 497 aa16.7■□□□□ 0.26
CLCF1-201ENST00000312438 SLC1A6P48664 564 aa16.7■□□□□ 0.26
CLCF1-201ENST00000312438 XIAPP98170 497 aa16.7■□□□□ 0.26
CLCF1-201ENST00000312438 ITGA9Q13797 1035 aa16.7■□□□□ 0.26
CLCF1-201ENST00000312438 ZRANB3Q5FWF4 1079 aa16.7■□□□□ 0.26
CLCF1-201ENST00000312438 ANKRD54Q6NXT1 300 aa16.7■□□□□ 0.26
CLCF1-201ENST00000312438 GBP7Q8N8V2 638 aaPredicted RBP16.7■□□□□ 0.26
CLCF1-201ENST00000312438 OR2A12Q8NGT7 310 aa16.7■□□□□ 0.26
CLCF1-201ENST00000312438 HEXDCQ8WVB3 486 aa16.7■□□□□ 0.26
CLCF1-201ENST00000312438 LPGAT1Q92604 370 aa16.7■□□□□ 0.26
CLCF1-201ENST00000312438 MRGPRX3Q96LB0 322 aa16.7■□□□□ 0.26
CLCF1-201ENST00000312438 AARSD1Q9BTE6 412 aaKnown RBP16.7■□□□□ 0.26
CLCF1-201ENST00000312438 C20orf27Q9GZN8 174 aa16.7■□□□□ 0.26
CLCF1-201ENST00000312438 NSUN3Q9H649 340 aaKnown RBP16.7■□□□□ 0.26
CLCF1-201ENST00000312438 ZDHHC6Q9H6R6 413 aa16.7■□□□□ 0.26
CLCF1-201ENST00000312438 POPDC3Q9HBV1 291 aa16.7■□□□□ 0.26
CLCF1-201ENST00000312438 IGSF5Q9NSI5 407 aa16.7■□□□□ 0.26
CLCF1-201ENST00000312438 OXSMQ9NWU1 459 aa16.7■□□□□ 0.26
CLCF1-201ENST00000312438 SLC30A1Q9Y6M5 507 aa16.7■□□□□ 0.26
CLCF1-201ENST00000312438 HELZP42694 1942 aaKnown RBP16.7■□□□□ 0.26
CLCF1-201ENST00000312438 H2AFYO75367 372 aaKnown RBP16.69■□□□□ 0.26
CLCF1-201ENST00000312438 DLDP09622 509 aaKnown RBP16.69■□□□□ 0.26
CLCF1-201ENST00000312438 SBK3P0C264 359 aa16.69■□□□□ 0.26
CLCF1-201ENST00000312438 PRSS56P0CW18 603 aa16.69■□□□□ 0.26
CLCF1-201ENST00000312438 CCDC166P0CW27 439 aa16.69■□□□□ 0.26
CLCF1-201ENST00000312438 POLR2LP62875 67 aaKnown RBP16.69■□□□□ 0.26
CLCF1-201ENST00000312438 CACNG1Q06432 222 aa16.69■□□□□ 0.26
CLCF1-201ENST00000312438 HYAL1Q12794 435 aa16.69■□□□□ 0.26
CLCF1-201ENST00000312438 CSHL1Q14406 222 aa16.69■□□□□ 0.26
CLCF1-201ENST00000312438 ACAP2Q15057 778 aa16.69■□□□□ 0.26
CLCF1-201ENST00000312438 PDGFRLQ15198 375 aa16.69■□□□□ 0.26
CLCF1-201ENST00000312438 LACTB2Q53H82 288 aaPredicted RBP16.69■□□□□ 0.26
CLCF1-201ENST00000312438 KLC3Q6P597 504 aa16.69■□□□□ 0.26
CLCF1-201ENST00000312438 SYCE2Q6PIF2 218 aa16.69■□□□□ 0.26
CLCF1-201ENST00000312438 Q6ZVU0 165 aa16.69■□□□□ 0.26
CLCF1-201ENST00000312438 ZSWIM9Q86XI8 627 aa16.69■□□□□ 0.26
CLCF1-201ENST00000312438 SPATA6LQ8N4H0 392 aa16.69■□□□□ 0.26
CLCF1-201ENST00000312438 RFWD2Q8NHY2 731 aa16.69■□□□□ 0.26
CLCF1-201ENST00000312438 FRS2Q8WU20 508 aa16.69■□□□□ 0.26
CLCF1-201ENST00000312438 TIFAQ96CG3 184 aa16.69■□□□□ 0.26
CLCF1-201ENST00000312438 ASIC4Q96FT7 647 aa16.69■□□□□ 0.26
CLCF1-201ENST00000312438 RMDN2Q96LZ7 410 aa16.69■□□□□ 0.26
CLCF1-201ENST00000312438 FAM83CQ9BQN1 747 aa16.69■□□□□ 0.26
CLCF1-201ENST00000312438 HEPHQ9BQS7 1158 aa16.69■□□□□ 0.26
CLCF1-201ENST00000312438 CIPCQ9C0C6 399 aa16.69■□□□□ 0.26
CLCF1-201ENST00000312438 CCDC68Q9H2F9 335 aa16.69■□□□□ 0.26
CLCF1-201ENST00000312438 MRPL46Q9H2W6 279 aaKnown RBP16.69■□□□□ 0.26
CLCF1-201ENST00000312438 EBF3Q9H4W6 596 aa16.69■□□□□ 0.26
CLCF1-201ENST00000312438 ZNF395Q9H8N7 513 aaPredicted RBP16.69■□□□□ 0.26
CLCF1-201ENST00000312438 ZFP14Q9HCL3 533 aa16.69■□□□□ 0.26
CLCF1-201ENST00000312438 DCTN4Q9UJW0 460 aa16.69■□□□□ 0.26
CLCF1-201ENST00000312438 RRP15Q9Y3B9 282 aaKnown RBP16.69■□□□□ 0.26
CLCF1-201ENST00000312438 MYLKQ15746 1914 aa16.69■□□□□ 0.26
CLCF1-201ENST00000312438 TULP3O75386 442 aa16.68■□□□□ 0.26
CLCF1-201ENST00000312438 DCTN3O75935 186 aa16.68■□□□□ 0.26
CLCF1-201ENST00000312438 WISP3O95389 354 aaPredicted RBP16.68■□□□□ 0.26
CLCF1-201ENST00000312438 CLDN7O95471 211 aa16.68■□□□□ 0.26
CLCF1-201ENST00000312438 RBP1P09455 135 aa16.68■□□□□ 0.26
CLCF1-201ENST00000312438 ARSAP15289 507 aa16.68■□□□□ 0.26
CLCF1-201ENST00000312438 CDKN1CP49918 316 aaPredicted RBP16.68■□□□□ 0.26
CLCF1-201ENST00000312438 SUOXP51687 545 aa16.68■□□□□ 0.26
CLCF1-201ENST00000312438 ARFIP2P53365 341 aa16.68■□□□□ 0.26
CLCF1-201ENST00000312438 PTPN5P54829 565 aa16.68■□□□□ 0.26
CLCF1-201ENST00000312438 TCEAL5Q5H9L2 206 aa16.68■□□□□ 0.26
CLCF1-201ENST00000312438 PSAPL1Q6NUJ1 521 aa16.68■□□□□ 0.26
CLCF1-201ENST00000312438 GDPD4Q6W3E5 623 aa16.68■□□□□ 0.26
CLCF1-201ENST00000312438 CERS6Q6ZMG9 384 aa16.68■□□□□ 0.26
CLCF1-201ENST00000312438 TPRG1Q6ZUI0 275 aa16.68■□□□□ 0.26
CLCF1-201ENST00000312438 USP45Q70EL2 814 aa16.68■□□□□ 0.26
CLCF1-201ENST00000312438 ETFBKMTQ8IXQ9 262 aa16.68■□□□□ 0.26
CLCF1-201ENST00000312438 PIANPQ8IYJ0 282 aa16.68■□□□□ 0.26
CLCF1-201ENST00000312438 CBARPQ8N350 705 aaPredicted RBP16.68■□□□□ 0.26
CLCF1-201ENST00000312438 PPP4R1Q8TF05 950 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms