RNA–Protein interactions for RNA: ENST00000312413.10

CLCN6-201, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 2 BASIC

Gene CLCN6, Length 5,631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-201ENST00000312413 FAM172BPA6NC97 362 aa13.68□□□□□ -0.22
CLCN6-201ENST00000312413 C2orf71A6NGG8 1288 aa13.68□□□□□ -0.22
CLCN6-201ENST00000312413 DCDC2CA8MYV0 355 aa13.68□□□□□ -0.22
CLCN6-201ENST00000312413 E7ENX8 843 aa13.68□□□□□ -0.22
CLCN6-201ENST00000312413 PAPSS1O43252 624 aaPredicted RBP13.68□□□□□ -0.22
CLCN6-201ENST00000312413 LGR5O75473 907 aa13.68□□□□□ -0.22
CLCN6-201ENST00000312413 ATP5C1P36542 298 aaKnown RBP13.68□□□□□ -0.22
CLCN6-201ENST00000312413 GRPEL2Q8TAA5 225 aa13.68□□□□□ -0.22
CLCN6-201ENST00000312413 HDAC10Q969S8 669 aa13.68□□□□□ -0.22
CLCN6-201ENST00000312413 BPIFA1Q9NP55 256 aa13.68□□□□□ -0.22
CLCN6-201ENST00000312413 IFT80Q9P2H3 777 aaPredicted RBP13.68□□□□□ -0.22
CLCN6-201ENST00000312413 FBXO10Q9UK96 956 aa13.68□□□□□ -0.22
CLCN6-201ENST00000312413 KCNE2Q9Y6J6 123 aa13.68□□□□□ -0.22
CLCN6-201ENST00000312413 OAS3Q9Y6K5 1087 aaKnown RBP13.68□□□□□ -0.22
CLCN6-201ENST00000312413 ACSL4O60488 711 aa13.68□□□□□ -0.22
CLCN6-201ENST00000312413 RAB2AP61019 212 aa13.68□□□□□ -0.22
CLCN6-201ENST00000312413 FAM171BQ6P995 826 aa13.68□□□□□ -0.22
CLCN6-201ENST00000312413 FOXR2Q6PJQ5 311 aa13.68□□□□□ -0.22
CLCN6-201ENST00000312413 CBR4Q8N4T8 237 aa13.68□□□□□ -0.22
CLCN6-201ENST00000312413 ZNF557Q8N988 423 aaPredicted RBP13.68□□□□□ -0.22
CLCN6-201ENST00000312413 CHCHD6Q9BRQ6 235 aa13.68□□□□□ -0.22
CLCN6-201ENST00000312413 LMAN2LQ9H0V9 348 aa13.68□□□□□ -0.22
CLCN6-201ENST00000312413 ERVK-5Q9HDB9 667 aa13.68□□□□□ -0.22
CLCN6-201ENST00000312413 DNM1LO00429 736 aa13.68□□□□□ -0.22
CLCN6-201ENST00000312413 CHST10O43529 356 aa13.68□□□□□ -0.22
CLCN6-201ENST00000312413 COL6A2P12110 1019 aa13.68□□□□□ -0.22
CLCN6-201ENST00000312413 LPOP22079 712 aaPredicted RBP13.68□□□□□ -0.22
CLCN6-201ENST00000312413 OAZ1P54368 228 aa13.68□□□□□ -0.22
CLCN6-201ENST00000312413 TGFB2P61812 414 aa13.68□□□□□ -0.22
CLCN6-201ENST00000312413 EN1Q05925 392 aaPredicted RBP13.68□□□□□ -0.22
CLCN6-201ENST00000312413 TMPRSS11AQ6ZMR5 421 aa13.68□□□□□ -0.22
CLCN6-201ENST00000312413 ANKRD52Q8NB46 1076 aa13.68□□□□□ -0.22
CLCN6-201ENST00000312413 OR4L1Q8NH43 312 aa13.68□□□□□ -0.22
CLCN6-201ENST00000312413 C18orf25Q96B23 403 aaPredicted RBP13.68□□□□□ -0.22
CLCN6-201ENST00000312413 ABCG8Q9H221 673 aa13.68□□□□□ -0.22
CLCN6-201ENST00000312413 PEX16Q9Y5Y5 336 aa13.68□□□□□ -0.22
CLCN6-201ENST00000312413 CAMSAP1Q5T5Y3 1602 aa13.68□□□□□ -0.22
CLCN6-201ENST00000312413 IFNGP01579 166 aa13.68□□□□□ -0.22
CLCN6-201ENST00000312413 FTH1P02794 183 aa13.68□□□□□ -0.22
CLCN6-201ENST00000312413 SNRPD1P62314 119 aaKnown RBP13.68□□□□□ -0.22
CLCN6-201ENST00000312413 PFKPQ01813 784 aa13.68□□□□□ -0.22
CLCN6-201ENST00000312413 CA9Q16790 459 aa13.68□□□□□ -0.22
CLCN6-201ENST00000312413 RASAL3Q86YV0 1011 aa13.68□□□□□ -0.22
CLCN6-201ENST00000312413 DAW1Q8N136 415 aa13.68□□□□□ -0.22
CLCN6-201ENST00000312413 PTCD2Q8WV60 388 aaKnown RBP13.68□□□□□ -0.22
CLCN6-201ENST00000312413 PPM1MQ96MI6 270 aa13.68□□□□□ -0.22
CLCN6-201ENST00000312413 INTS7Q9NVH2 962 aaKnown RBP13.68□□□□□ -0.22
CLCN6-201ENST00000312413 SYNPO2Q9UMS6 1093 aa13.68□□□□□ -0.22
CLCN6-201ENST00000312413 SLC28A2O43868 658 aa13.67□□□□□ -0.22
CLCN6-201ENST00000312413 ERBB2P04626 1255 aa13.67□□□□□ -0.22
CLCN6-201ENST00000312413 MARSP56192 900 aaKnown RBP13.67□□□□□ -0.22
CLCN6-201ENST00000312413 SREBF2Q12772 1141 aa13.67□□□□□ -0.22
CLCN6-201ENST00000312413 SEMA5AQ13591 1074 aa13.67□□□□□ -0.22
CLCN6-201ENST00000312413 LCN1P1Q5VSP4 162 aa13.67□□□□□ -0.22
CLCN6-201ENST00000312413 FRMD7Q6ZUT3 714 aa13.67□□□□□ -0.22
CLCN6-201ENST00000312413 TMEM161BQ8NDZ6 487 aa13.67□□□□□ -0.22
CLCN6-201ENST00000312413 KBTBD7Q8WVZ9 684 aa13.67□□□□□ -0.22
CLCN6-201ENST00000312413 PPCDCQ96CD2 204 aa13.67□□□□□ -0.22
CLCN6-201ENST00000312413 EXD2Q9NVH0 621 aa13.67□□□□□ -0.22
CLCN6-201ENST00000312413 OR10H1Q9Y4A9 318 aa13.67□□□□□ -0.22
CLCN6-201ENST00000312413 NOS1APO75052 506 aaPredicted RBP13.67□□□□□ -0.22
CLCN6-201ENST00000312413 UGT2B17O75795 530 aa13.67□□□□□ -0.22
CLCN6-201ENST00000312413 NRG1Q02297 640 aaPredicted RBP13.67□□□□□ -0.22
CLCN6-201ENST00000312413 WSCD1Q658N2 575 aa13.67□□□□□ -0.22
CLCN6-201ENST00000312413 OR4A15Q8NGL6 344 aa13.67□□□□□ -0.22
CLCN6-201ENST00000312413 CENPNQ96H22 339 aaPredicted RBP13.67□□□□□ -0.22
CLCN6-201ENST00000312413 NODALQ96S42 347 aa13.67□□□□□ -0.22
CLCN6-201ENST00000312413 C1QTNF7Q9BXJ2 289 aa13.67□□□□□ -0.22
CLCN6-201ENST00000312413 POLR2EP19388 210 aaKnown RBP13.67□□□□□ -0.22
CLCN6-201ENST00000312413 PEX2P28328 305 aa13.67□□□□□ -0.22
CLCN6-201ENST00000312413 TAS2R41P59536 307 aa13.67□□□□□ -0.22
CLCN6-201ENST00000312413 CYP4F8P98187 520 aa13.67□□□□□ -0.22
CLCN6-201ENST00000312413 POU5F1Q01860 360 aaKnown RBP13.67□□□□□ -0.22
CLCN6-201ENST00000312413 KHDC1Q4VXA5 237 aaKnown RBP13.67□□□□□ -0.22
CLCN6-201ENST00000312413 RUNDC3AQ59EK9 446 aa13.67□□□□□ -0.22
CLCN6-201ENST00000312413 CNSTQ6PJW8 725 aa13.67□□□□□ -0.22
CLCN6-201ENST00000312413 LRRN4Q8WUT4 740 aa13.67□□□□□ -0.22
CLCN6-201ENST00000312413 RAB23Q9ULC3 237 aa13.67□□□□□ -0.22
CLCN6-201ENST00000312413 ERAL1O75616 437 aaKnown RBP13.67□□□□□ -0.22
CLCN6-201ENST00000312413 PSMD10O75832 226 aa13.67□□□□□ -0.22
CLCN6-201ENST00000312413 IPO13O94829 963 aaKnown RBP13.67□□□□□ -0.22
CLCN6-201ENST00000312413 GPIP06744 558 aa13.67□□□□□ -0.22
CLCN6-201ENST00000312413 PRDX6P30041 224 aa13.67□□□□□ -0.22
CLCN6-201ENST00000312413 PBX1P40424 430 aa13.67□□□□□ -0.22
CLCN6-201ENST00000312413 ARPC4P59998 168 aa13.67□□□□□ -0.22
CLCN6-201ENST00000312413 RBBP4Q09028 425 aa13.67□□□□□ -0.22
CLCN6-201ENST00000312413 ZACNQ401N2 412 aa13.67□□□□□ -0.22
CLCN6-201ENST00000312413 FAM92BQ6ZTR7 304 aa13.67□□□□□ -0.22
CLCN6-201ENST00000312413 OAFQ86UD1 273 aa13.67□□□□□ -0.22
CLCN6-201ENST00000312413 HAS1Q92839 578 aa13.67□□□□□ -0.22
CLCN6-201ENST00000312413 NXNL1Q96CM4 212 aa13.67□□□□□ -0.22
CLCN6-201ENST00000312413 TMEM109Q9BVC6 243 aa13.67□□□□□ -0.22
CLCN6-201ENST00000312413 OSBPL7Q9BZF2 842 aa13.67□□□□□ -0.22
CLCN6-201ENST00000312413 TNFSF13BQ9Y275 285 aa13.67□□□□□ -0.22
CLCN6-201ENST00000312413 ABCA6Q8N139 1617 aa13.67□□□□□ -0.22
CLCN6-201ENST00000312413 FGF1P05230 155 aa13.67□□□□□ -0.22
CLCN6-201ENST00000312413 ATF6P18850 670 aa13.67□□□□□ -0.22
CLCN6-201ENST00000312413 S100GP29377 79 aa13.67□□□□□ -0.22
CLCN6-201ENST00000312413 POLR2JP52435 117 aaKnown RBP13.67□□□□□ -0.22
CLCN6-201ENST00000312413 PPP2R2BQ00005 443 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms