RNA–Protein interactions for RNA: ENST00000307340.7

USH2A-201, Transcript of usherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USH2A, Length 18,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-201ENST00000307340 FAM217BQ9NTX9 383 aaPredicted RBP4.02□□□□□ -1.77
USH2A-201ENST00000307340 PHIPQ8WWQ0 1821 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 PPEF2O14830 753 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 APOL3O95236 402 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 ADH1CP00326 375 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 HLA-FP30511 346 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 CBX5P45973 191 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 FOLH1Q04609 750 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 SERINC3Q13530 473 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 NFYCQ13952 458 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 LCN1P1Q5VSP4 162 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 PPP2R2DQ66LE6 453 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 DUPD1Q68J44 220 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 SPARTQ8N0X7 666 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 ATG16L2Q8NAA4 619 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 DUSP16Q9BY84 665 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 SEMA4CQ9C0C4 833 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 SMPD3Q9NY59 655 aaPredicted RBP4.02□□□□□ -1.77
USH2A-201ENST00000307340 MEMO1Q9Y316 297 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 LRRC42Q9Y546 428 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 SLC16A4O15374 487 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 IFNA7P01567 189 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 CYP2F1P24903 491 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 PTDSS1P48651 473 aaKnown RBP4.02□□□□□ -1.77
USH2A-201ENST00000307340 MBTD1Q05BQ5 628 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 COX10Q12887 443 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 IL31Q6EBC2 164 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 RINLQ6ZS11 566 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 ZDHHC14Q8IZN3 488 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 EID2Q8N6I1 236 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 BPIFB6Q8NFQ5 453 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 GBA3Q9H227 469 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 QSER1Q2KHR3 1735 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 C1QTNF3-AMACRE9PGA6 284 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 FOXN3O00409 490 aaPredicted RBP4.02□□□□□ -1.77
USH2A-201ENST00000307340 KIAA0355O15063 1070 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 ADH1AP07327 375 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 RGS1Q08116 209 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 EIF4HQ15056 248 aaKnown RBP4.02□□□□□ -1.77
USH2A-201ENST00000307340 LRIF1Q5T3J3 769 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 PLEKHA7Q6IQ23 1121 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 PQLC1Q8N2U9 271 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 GALNT15Q8N3T1 639 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 FATE1Q969F0 183 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 APOL6Q9BWW8 343 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 RTFDC1Q9BY42 306 aaPredicted RBP4.02□□□□□ -1.77
USH2A-201ENST00000307340 ATG12O94817 140 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 H6PDO95479 791 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 FADS2O95864 444 aaKnown RBP4.02□□□□□ -1.77
USH2A-201ENST00000307340 VCAM1P19320 739 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 RORAP35398 523 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 ZNF132P52740 706 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.02□□□□□ -1.77
USH2A-201ENST00000307340 ANKRD22Q5VYY1 191 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 GPR180Q86V85 440 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 VGLL2Q8N8G2 317 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 SETD6Q8TBK2 473 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 EMID1Q96A84 441 aaPredicted RBP4.02□□□□□ -1.77
USH2A-201ENST00000307340 CCDC32Q9BV29 185 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 THAP2Q9H0W7 228 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 KCTD10Q9H3F6 313 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 ARHGEF3Q9NR81 526 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 MAFO75444 373 aaPredicted RBP4.02□□□□□ -1.77
USH2A-201ENST00000307340 OAZ2O95190 189 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 LTFP02788 710 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 ZNF3P17036 446 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 EIF2AK2P19525 551 aaKnown RBP4.02□□□□□ -1.77
USH2A-201ENST00000307340 LRPAP1P30533 357 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 AVPR1AP37288 418 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 MEF2AQ02078 507 aaPredicted RBP4.02□□□□□ -1.77
USH2A-201ENST00000307340 PAK6Q9NQU5 681 aaPredicted RBP4.02□□□□□ -1.77
USH2A-201ENST00000307340 A0A096LPK6 155 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 DNAJB13P59910 316 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 STXBP1P61764 594 aaKnown RBP4.02□□□□□ -1.77
USH2A-201ENST00000307340 ELF3P78545 371 aaPredicted RBP4.02□□□□□ -1.77
USH2A-201ENST00000307340 THEMIS2Q5TEJ8 643 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 NLRP8Q86W28 1048 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 SAMD11Q96NU1 681 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 ACBD6Q9BR61 282 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 TCEAL7Q9BRU2 100 aa4.02□□□□□ -1.77
USH2A-201ENST00000307340 KIAA1522Q9P206 1035 aaPredicted RBP4.02□□□□□ -1.77
USH2A-201ENST00000307340 DHRS12A0PJE2 317 aa4.01□□□□□ -1.77
USH2A-201ENST00000307340 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.01□□□□□ -1.77
USH2A-201ENST00000307340 POLR1CO15160 346 aaPredicted RBP4.01□□□□□ -1.77
USH2A-201ENST00000307340 CDH3P22223 829 aa4.01□□□□□ -1.77
USH2A-201ENST00000307340 VSIG10LQ86VR7 867 aa4.01□□□□□ -1.77
USH2A-201ENST00000307340 ZSWIM2Q8NEG5 633 aa4.01□□□□□ -1.77
USH2A-201ENST00000307340 ZBED6CLQ96FA7 236 aaPredicted RBP4.01□□□□□ -1.77
USH2A-201ENST00000307340 SIK2Q9H0K1 926 aa4.01□□□□□ -1.77
USH2A-201ENST00000307340 DDIT4Q9NX09 232 aa4.01□□□□□ -1.77
USH2A-201ENST00000307340 PDCD5O14737 125 aa4.01□□□□□ -1.77
USH2A-201ENST00000307340 SCELO95171 688 aa4.01□□□□□ -1.77
USH2A-201ENST00000307340 HIST1H2ABP04908 130 aa4.01□□□□□ -1.77
USH2A-201ENST00000307340 LYNP07948 512 aa4.01□□□□□ -1.77
USH2A-201ENST00000307340 FAM110CQ1W6H9 321 aa4.01□□□□□ -1.77
USH2A-201ENST00000307340 RASSF6Q6ZTQ3 369 aa4.01□□□□□ -1.77
USH2A-201ENST00000307340 HIST3H2AQ7L7L0 130 aa4.01□□□□□ -1.77
USH2A-201ENST00000307340 FAM228AQ86W67 206 aa4.01□□□□□ -1.77
USH2A-201ENST00000307340 GPSM1Q86YR5 675 aa4.01□□□□□ -1.77
USH2A-201ENST00000307340 OR6J1Q8NGC5 347 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms