RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 TM7SF3Q9NS93 570 aa10.99□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 FEZ2Q9UHY8 353 aaPredicted RBP10.99□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 CD84Q9UIB8 345 aa10.99□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 SHOC2Q9UQ13 582 aa10.99□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 DRG1Q9Y295 367 aaKnown RBP10.99□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 FNDC3AQ9Y2H6 1198 aaKnown RBP10.99□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 SAR1BQ9Y6B6 198 aa10.99□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 A0A0U1RQS6 177 aa10.98□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 A0A1B0GTQ1 180 aa10.98□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 ERI2A8K979 691 aaKnown RBP10.98□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 PDE2AO00408 941 aaPredicted RBP10.98□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 SLC30A4O14863 429 aa10.98□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 ZNF185O15231 689 aa10.98□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 PHF2O75151 1096 aa10.98□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 METTL18O95568 372 aa10.98□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 GAS8O95995 478 aa10.98□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 AGTP01019 485 aa10.98□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 ATXN1LP0C7T5 689 aaKnown RBP10.98□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 KELP23276 732 aa10.98□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 PAFAH1B1P43034 410 aa10.98□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 CHRNA4P43681 627 aa10.98□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 KCNJ1P48048 391 aa10.98□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 BASP1P80723 227 aaKnown RBP10.98□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 IL9RQ01113 521 aa10.98□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 PTSQ03393 145 aa10.98□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 SLC14A1Q13336 389 aa10.98□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 NFATC4Q14934 902 aa10.98□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 HS1BP3Q53T59 392 aa10.98□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 PAPD7Q5XG87 772 aaKnown RBP10.98□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 PNCKQ6P2M8 343 aa10.98□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 PPP1R21Q6ZMI0 780 aa10.98□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 MACC1Q6ZN28 852 aa10.98□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 Q6ZVL8 140 aa10.98□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 ZNF765Q7L2R6 523 aa10.98□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 LINC00523Q86TU6 105 aa10.98□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 SLC22A18ASQ8N1D0 253 aa10.98□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 TAB3Q8N5C8 712 aaPredicted RBP10.98□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 PRELID2Q8N945 189 aa10.98□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 APOL2Q9BQE5 337 aa10.98□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 GORASP1Q9BQQ3 440 aa10.98□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 RTKNQ9BST9 563 aa10.98□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 APOOQ9BUR5 198 aa10.98□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 IL21RQ9HBE5 538 aa10.98□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 DNAJC28Q9NX36 388 aa10.98□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 SMARCAL1Q9NZC9 954 aa10.98□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 PKP3Q9Y446 797 aa10.98□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 OR1A2Q9Y585 309 aa10.98□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 PLXNB3Q9ULL4 1909 aa10.97□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 ZFHX2Q9C0A1 2572 aaPredicted RBP10.97□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 SPTY2D1-AS1A0A0U1RR47 76 aa10.97□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 RGSL1A5PLK6 1076 aa10.97□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 FLRT2O43155 660 aa10.97□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 AP2A1O95782 977 aa10.97□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 GM2AP17900 193 aa10.97□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 KCNA4P22459 653 aa10.97□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 EPHA8P29322 1005 aaPredicted RBP10.97□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 ID4P47928 161 aa10.97□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 SPINT3P49223 89 aa10.97□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 FNTAP49354 379 aa10.97□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 BLKP51451 505 aa10.97□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 KIAA1024LP59773 190 aa10.97□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 HNRNPKP61978 463 aaKnown RBP eCLIP10.97□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 PDE1BQ01064 536 aa10.97□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 DPTQ07507 201 aa10.97□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 ALS2CLQ60I27 953 aa10.97□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 CCDC137Q6PK04 289 aaKnown RBP10.97□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 ENPP7Q6UWV6 458 aa10.97□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 TECPR1Q7Z6L1 1165 aa10.97□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 HEATR4Q86WZ0 1026 aa10.97□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 SPATS2Q86XZ4 545 aaKnown RBP10.97□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 PDCD7Q8N8D1 485 aaKnown RBP10.97□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 DNAAF3Q8N9W5 541 aa10.97□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 PLA2G15Q8NCC3 412 aa10.97□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 BTN2A2Q8WVV5 523 aa10.97□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 WDR92Q96MX6 357 aa10.97□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 SLC13A1Q9BZW2 595 aa10.97□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 CDH19Q9H159 772 aa10.97□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 ABCG8Q9H221 673 aa10.97□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 SLC32A1Q9H598 525 aa10.97□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 ETNK1Q9HBU6 452 aa10.97□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 RAB6BQ9NRW1 208 aa10.97□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 GPR27Q9NS67 375 aa10.97□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 KLQ9UEF7 1012 aa10.97□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 COL5A1P20908 1838 aaPredicted RBP10.97□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 C2orf81A6NN90 581 aa10.96□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 USP12O75317 370 aa10.96□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 CRTAMO95727 393 aa10.96□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 APRTP07741 180 aa10.96□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 MYCLP1P12525 358 aaPredicted RBP10.96□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 ETS1P14921 441 aa10.96□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 JUNDP17535 347 aa10.96□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 TEAD1P28347 426 aa10.96□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 ADRA1AP35348 466 aa10.96□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 COILP38432 576 aaPredicted RBP10.96□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 RXRGP48443 463 aa10.96□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 VPS41P49754 854 aa10.96□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 DCDC1P59894 354 aa10.96□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 ETF1P62495 437 aaKnown RBP10.96□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 PPARDQ03181 441 aa10.96□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 OLIG2Q13516 323 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms