RNA–Protein interactions for RNA: ENST00000305481.10

USP47-201, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-201ENST00000305481 GOLGA8QA0A0J9YX86 632 aa6.54□□□□□ -1.36
USP47-201ENST00000305481 GOLGA8OA6NCC3 632 aa6.54□□□□□ -1.36
USP47-201ENST00000305481 E9PBE3 544 aa6.54□□□□□ -1.36
USP47-201ENST00000305481 GOLGA8NF8WBI6 632 aa6.54□□□□□ -1.36
USP47-201ENST00000305481 HDAC3O15379 428 aa6.54□□□□□ -1.36
USP47-201ENST00000305481 GPR39O43194 453 aa6.54□□□□□ -1.36
USP47-201ENST00000305481 OR1I1O60431 355 aa6.54□□□□□ -1.36
USP47-201ENST00000305481 NPHS1O60500 1241 aa6.54□□□□□ -1.36
USP47-201ENST00000305481 KLHL41O60662 606 aa6.54□□□□□ -1.36
USP47-201ENST00000305481 RFPL2O75678 378 aa6.54□□□□□ -1.36
USP47-201ENST00000305481 IPO13O94829 963 aaKnown RBP6.54□□□□□ -1.36
USP47-201ENST00000305481 HSPA8P11142 646 aaKnown RBP6.54□□□□□ -1.36
USP47-201ENST00000305481 HNRNPLP14866 589 aaKnown RBP eCLIP6.54□□□□□ -1.36
USP47-201ENST00000305481 ZNF37AP17032 561 aaPredicted RBP6.54□□□□□ -1.36
USP47-201ENST00000305481 LPOP22079 712 aaPredicted RBP6.54□□□□□ -1.36
USP47-201ENST00000305481 CPOXP36551 454 aa6.54□□□□□ -1.36
USP47-201ENST00000305481 CLCN4P51793 760 aa6.54□□□□□ -1.36
USP47-201ENST00000305481 PLK1P53350 603 aa6.54□□□□□ -1.36
USP47-201ENST00000305481 PRKAA1Q13131 559 aa6.54□□□□□ -1.36
USP47-201ENST00000305481 TBCCQ15814 346 aa6.54□□□□□ -1.36
USP47-201ENST00000305481 DGKKQ5KSL6 1271 aa6.54□□□□□ -1.36
USP47-201ENST00000305481 TMEM240Q5SV17 173 aa6.54□□□□□ -1.36
USP47-201ENST00000305481 MPP7Q5T2T1 576 aa6.54□□□□□ -1.36
USP47-201ENST00000305481 AFTPHQ6ULP2 937 aa6.54□□□□□ -1.36
USP47-201ENST00000305481 CCDC149Q6ZUS6 474 aa6.54□□□□□ -1.36
USP47-201ENST00000305481 UBE2Q1Q7Z7E8 422 aa6.54□□□□□ -1.36
USP47-201ENST00000305481 SDCCAG8Q86SQ7 713 aaPredicted RBP6.54□□□□□ -1.36
USP47-201ENST00000305481 SHKBP1Q8TBC3 707 aa6.54□□□□□ -1.36
USP47-201ENST00000305481 PIH1D2Q8WWB5 315 aa6.54□□□□□ -1.36
USP47-201ENST00000305481 NUF2Q9BZD4 464 aa6.54□□□□□ -1.36
USP47-201ENST00000305481 YY1AP1Q9H869 796 aa6.54□□□□□ -1.36
USP47-201ENST00000305481 INTS10Q9NVR2 710 aaKnown RBP6.54□□□□□ -1.36
USP47-201ENST00000305481 LSM7Q9UK45 103 aaKnown RBP6.54□□□□□ -1.36
USP47-201ENST00000305481 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.54□□□□□ -1.36
USP47-201ENST00000305481 C5orf42Q9H799 3197 aa6.54□□□□□ -1.36
USP47-201ENST00000305481 TYW5A2RUC4 315 aaKnown RBP6.53□□□□□ -1.36
USP47-201ENST00000305481 ENTPD5O75356 428 aa6.53□□□□□ -1.36
USP47-201ENST00000305481 RBP1P09455 135 aa6.53□□□□□ -1.36
USP47-201ENST00000305481 ALPIP09923 528 aa6.53□□□□□ -1.36
USP47-201ENST00000305481 CTPS1P17812 591 aa6.53□□□□□ -1.36
USP47-201ENST00000305481 SP100P23497 879 aaPredicted RBP6.53□□□□□ -1.36
USP47-201ENST00000305481 EPHA3P29320 983 aa6.53□□□□□ -1.36
USP47-201ENST00000305481 PMLP29590 882 aa6.53□□□□□ -1.36
USP47-201ENST00000305481 FMO4P31512 558 aa6.53□□□□□ -1.36
USP47-201ENST00000305481 CTSOP43234 321 aaPredicted RBP6.53□□□□□ -1.36
USP47-201ENST00000305481 XIAPP98170 497 aa6.53□□□□□ -1.36
USP47-201ENST00000305481 OR4D1Q15615 310 aa6.53□□□□□ -1.36
USP47-201ENST00000305481 MPPE1Q53F39 396 aa6.53□□□□□ -1.36
USP47-201ENST00000305481 CFAP157Q5JU67 520 aa6.53□□□□□ -1.36
USP47-201ENST00000305481 PLPP4Q5VZY2 271 aa6.53□□□□□ -1.36
USP47-201ENST00000305481 PIWIL4Q7Z3Z4 852 aaKnown RBP6.53□□□□□ -1.36
USP47-201ENST00000305481 TMPRSS6Q8IU80 811 aa6.53□□□□□ -1.36
USP47-201ENST00000305481 CMTM8Q8IZV2 173 aa6.53□□□□□ -1.36
USP47-201ENST00000305481 POU5F2Q8N7G0 328 aa6.53□□□□□ -1.36
USP47-201ENST00000305481 DNAJC5GQ8N7S2 189 aa6.53□□□□□ -1.36
USP47-201ENST00000305481 FIBINQ8TAL6 211 aa6.53□□□□□ -1.36
USP47-201ENST00000305481 SCG3Q8WXD2 468 aaKnown RBP6.53□□□□□ -1.36
USP47-201ENST00000305481 PHF21BQ96EK2 531 aa6.53□□□□□ -1.36
USP47-201ENST00000305481 SLC30A3Q99726 388 aa6.53□□□□□ -1.36
USP47-201ENST00000305481 NKX1-2Q9UD57 310 aaPredicted RBP6.53□□□□□ -1.36
USP47-201ENST00000305481 EVLQ9UI08 416 aaPredicted RBP6.53□□□□□ -1.36
USP47-201ENST00000305481 IKZF3Q9UKT9 509 aa6.53□□□□□ -1.36
USP47-201ENST00000305481 CORO1CQ9ULV4 474 aaPredicted RBP6.53□□□□□ -1.36
USP47-201ENST00000305481 MEI4A8MW99 385 aa6.53□□□□□ -1.36
USP47-201ENST00000305481 UBFD1O14562 309 aaKnown RBP6.53□□□□□ -1.36
USP47-201ENST00000305481 CHUKO15111 745 aa6.53□□□□□ -1.36
USP47-201ENST00000305481 DCXO43602 365 aa6.53□□□□□ -1.36
USP47-201ENST00000305481 PEX11AO75192 247 aa6.53□□□□□ -1.36
USP47-201ENST00000305481 WFS1O76024 890 aa6.53□□□□□ -1.36
USP47-201ENST00000305481 ARHGEF15O94989 841 aa6.53□□□□□ -1.36
USP47-201ENST00000305481 PGLSO95336 258 aa6.53□□□□□ -1.36
USP47-201ENST00000305481 GLUD1P00367 558 aa6.53□□□□□ -1.36
USP47-201ENST00000305481 MTHFD2P13995 350 aa6.53□□□□□ -1.36
USP47-201ENST00000305481 NCF2P19878 526 aaPredicted RBP6.53□□□□□ -1.36
USP47-201ENST00000305481 MC4RP32245 332 aa6.53□□□□□ -1.36
USP47-201ENST00000305481 CA5AP35218 305 aa6.53□□□□□ -1.36
USP47-201ENST00000305481 BMPR1AP36894 532 aa6.53□□□□□ -1.36
USP47-201ENST00000305481 KPNA2P52292 529 aaKnown RBP6.53□□□□□ -1.36
USP47-201ENST00000305481 CAMK1Q14012 370 aa6.53□□□□□ -1.36
USP47-201ENST00000305481 SLC5A9Q2M3M2 681 aa6.53□□□□□ -1.36
USP47-201ENST00000305481 LSM12Q3MHD2 195 aaKnown RBP6.53□□□□□ -1.36
USP47-201ENST00000305481 SEL1L3Q68CR1 1132 aa6.53□□□□□ -1.36
USP47-201ENST00000305481 ASTLQ6HA08 431 aaPredicted RBP6.53□□□□□ -1.36
USP47-201ENST00000305481 KLC3Q6P597 504 aa6.53□□□□□ -1.36
USP47-201ENST00000305481 PAQR3Q6TCH7 311 aa6.53□□□□□ -1.36
USP47-201ENST00000305481 WDR60Q8WVS4 1066 aa6.53□□□□□ -1.36
USP47-201ENST00000305481 CNDP1Q96KN2 507 aa6.53□□□□□ -1.36
USP47-201ENST00000305481 RAD9AQ99638 391 aa6.53□□□□□ -1.36
USP47-201ENST00000305481 C2orf49Q9BVC5 232 aaPredicted RBP6.53□□□□□ -1.36
USP47-201ENST00000305481 GSTO2Q9H4Y5 243 aa6.53□□□□□ -1.36
USP47-201ENST00000305481 POPDC3Q9HBV1 291 aa6.53□□□□□ -1.36
USP47-201ENST00000305481 TCF7L2Q9NQB0 619 aa6.53□□□□□ -1.36
USP47-201ENST00000305481 ASAH2Q9NR71 780 aa6.53□□□□□ -1.36
USP47-201ENST00000305481 TLR9Q9NR96 1032 aa6.53□□□□□ -1.36
USP47-201ENST00000305481 NCKIPSDQ9NZQ3 722 aa6.53□□□□□ -1.36
USP47-201ENST00000305481 IL17CQ9P0M4 197 aa6.53□□□□□ -1.36
USP47-201ENST00000305481 ARHGAP26Q9UNA1 814 aa6.53□□□□□ -1.36
USP47-201ENST00000305481 FAM50BQ9Y247 325 aa6.53□□□□□ -1.36
USP47-201ENST00000305481 ZNF510Q9Y2H8 683 aa6.53□□□□□ -1.36
USP47-201ENST00000305481 NOTCH4Q99466 2003 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms