RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 SMYD1Q8NB12 490 aa13.93□□□□□ -0.18
PRKCB-201ENST00000303531 NXNL1Q96CM4 212 aa13.93□□□□□ -0.18
PRKCB-201ENST00000303531 C7orf26Q96N11 449 aa13.93□□□□□ -0.18
PRKCB-201ENST00000303531 FNDC11Q9BVV2 318 aa13.93□□□□□ -0.18
PRKCB-201ENST00000303531 DNAJC28Q9NX36 388 aa13.93□□□□□ -0.18
PRKCB-201ENST00000303531 UBAP1Q9NZ09 502 aa13.93□□□□□ -0.18
PRKCB-201ENST00000303531 CDH22Q9UJ99 828 aa13.93□□□□□ -0.18
PRKCB-201ENST00000303531 SMIM28A0A1B0GU29 152 aa13.93□□□□□ -0.18
PRKCB-201ENST00000303531 DYTNA2CJ06 578 aa13.93□□□□□ -0.18
PRKCB-201ENST00000303531 TAF4O00268 1085 aa13.93□□□□□ -0.18
PRKCB-201ENST00000303531 ERAL1O75616 437 aaKnown RBP13.93□□□□□ -0.18
PRKCB-201ENST00000303531 RPP40O75818 363 aaKnown RBP13.93□□□□□ -0.18
PRKCB-201ENST00000303531 HIST1H2ABP04908 130 aa13.93□□□□□ -0.18
PRKCB-201ENST00000303531 ANXA8L1Q5VT79 327 aa13.93□□□□□ -0.18
PRKCB-201ENST00000303531 TAPT1Q6NXT6 567 aa13.93□□□□□ -0.18
PRKCB-201ENST00000303531 DEF8Q6ZN54 512 aa13.93□□□□□ -0.18
PRKCB-201ENST00000303531 HIST3H2AQ7L7L0 130 aa13.93□□□□□ -0.18
PRKCB-201ENST00000303531 CLHC1Q8NHS4 586 aa13.93□□□□□ -0.18
PRKCB-201ENST00000303531 TRPM4Q8TD43 1214 aa13.93□□□□□ -0.18
PRKCB-201ENST00000303531 HIST1H2ACQ93077 130 aa13.93□□□□□ -0.18
PRKCB-201ENST00000303531 EMID1Q96A84 441 aaPredicted RBP13.93□□□□□ -0.18
PRKCB-201ENST00000303531 MYO19Q96H55 970 aa13.93□□□□□ -0.18
PRKCB-201ENST00000303531 ADGRE2Q9UHX3 823 aa13.93□□□□□ -0.18
PRKCB-201ENST00000303531 H0Y858 1186 aa13.93□□□□□ -0.18
PRKCB-201ENST00000303531 PSMD11O00231 422 aa13.93□□□□□ -0.18
PRKCB-201ENST00000303531 ZBTB11O95625 1053 aaPredicted RBP13.93□□□□□ -0.18
PRKCB-201ENST00000303531 ITGAXP20702 1163 aa13.93□□□□□ -0.18
PRKCB-201ENST00000303531 DPYSQ14117 519 aa13.93□□□□□ -0.18
PRKCB-201ENST00000303531 UBE2R2Q712K3 238 aaPredicted RBP13.93□□□□□ -0.18
PRKCB-201ENST00000303531 FITM2Q8N6M3 262 aa13.93□□□□□ -0.18
PRKCB-201ENST00000303531 COL1A2P08123 1366 aa13.93□□□□□ -0.18
PRKCB-201ENST00000303531 SIN3BO75182 1162 aa13.93□□□□□ -0.18
PRKCB-201ENST00000303531 CD48P09326 243 aa13.93□□□□□ -0.18
PRKCB-201ENST00000303531 BNIP1Q12981 228 aa13.93□□□□□ -0.18
PRKCB-201ENST00000303531 TAF13Q15543 124 aa13.93□□□□□ -0.18
PRKCB-201ENST00000303531 DSELQ8IZU8 1212 aa13.93□□□□□ -0.18
PRKCB-201ENST00000303531 CXorf40BQ96DE9 158 aa13.93□□□□□ -0.18
PRKCB-201ENST00000303531 TM7SF2O76062 418 aa13.93□□□□□ -0.18
PRKCB-201ENST00000303531 SLC25A14O95258 325 aaPredicted RBP13.93□□□□□ -0.18
PRKCB-201ENST00000303531 SLC6A2P23975 617 aa13.93□□□□□ -0.18
PRKCB-201ENST00000303531 ROR2Q01974 943 aaKnown RBP13.93□□□□□ -0.18
PRKCB-201ENST00000303531 SPATA19Q7Z5L4 167 aa13.93□□□□□ -0.18
PRKCB-201ENST00000303531 SPPL2CQ8IUH8 684 aa13.93□□□□□ -0.18
PRKCB-201ENST00000303531 TBC1D21Q8IYX1 336 aa13.93□□□□□ -0.18
PRKCB-201ENST00000303531 CAPSLQ8WWF8 208 aa13.93□□□□□ -0.18
PRKCB-201ENST00000303531 DHX33Q9H6R0 707 aaKnown RBP13.93□□□□□ -0.18
PRKCB-201ENST00000303531 U3KQV3 271 aa13.93□□□□□ -0.18
PRKCB-201ENST00000303531 NT5C1B-RDH14C9J2C7 533 aa13.92□□□□□ -0.18
PRKCB-201ENST00000303531 SLC26A3P40879 764 aa13.92□□□□□ -0.18
PRKCB-201ENST00000303531 PYDC2Q56P42 97 aa13.92□□□□□ -0.18
PRKCB-201ENST00000303531 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.92□□□□□ -0.18
PRKCB-201ENST00000303531 RIPK3Q9Y572 518 aa13.92□□□□□ -0.18
PRKCB-201ENST00000303531 CAPN8A6NHC0 703 aa13.92□□□□□ -0.18
PRKCB-201ENST00000303531 COL6A2P12110 1019 aa13.92□□□□□ -0.18
PRKCB-201ENST00000303531 IKBIPQ70UQ0 350 aa13.92□□□□□ -0.18
PRKCB-201ENST00000303531 CDH24Q86UP0 819 aa13.92□□□□□ -0.18
PRKCB-201ENST00000303531 OR4K2Q8NGD2 314 aa13.92□□□□□ -0.18
PRKCB-201ENST00000303531 CLIP3Q96DZ5 547 aa13.92□□□□□ -0.18
PRKCB-201ENST00000303531 DMTF1Q9Y222 760 aa13.92□□□□□ -0.18
PRKCB-201ENST00000303531 SMIM35A0A1B0GVV1 85 aa13.92□□□□□ -0.18
PRKCB-201ENST00000303531 TM4SF1P30408 202 aa13.92□□□□□ -0.18
PRKCB-201ENST00000303531 CCNIQ14094 377 aa13.92□□□□□ -0.18
PRKCB-201ENST00000303531 VWA5B1Q5TIE3 1220 aa13.92□□□□□ -0.18
PRKCB-201ENST00000303531 FAM220AQ7Z4H9 259 aa13.92□□□□□ -0.18
PRKCB-201ENST00000303531 CPSF7Q8N684 471 aaKnown RBP13.92□□□□□ -0.18
PRKCB-201ENST00000303531 BTN2A3PQ96KV6 586 aa13.92□□□□□ -0.18
PRKCB-201ENST00000303531 CMTM6Q9NX76 183 aa13.92□□□□□ -0.18
PRKCB-201ENST00000303531 PCDHGC3Q9UN70 934 aa13.92□□□□□ -0.18
PRKCB-201ENST00000303531 MRPS23Q9Y3D9 190 aaKnown RBP13.92□□□□□ -0.18
PRKCB-201ENST00000303531 CARNS1A5YM72 827 aa13.92□□□□□ -0.18
PRKCB-201ENST00000303531 CCDC182A6NF36 153 aa13.92□□□□□ -0.18
PRKCB-201ENST00000303531 MSCO60682 206 aa13.92□□□□□ -0.18
PRKCB-201ENST00000303531 BUD31P41223 144 aaPredicted RBP13.92□□□□□ -0.18
PRKCB-201ENST00000303531 CREMQ03060 361 aa13.92□□□□□ -0.18
PRKCB-201ENST00000303531 LACTB2Q53H82 288 aaPredicted RBP13.92□□□□□ -0.18
PRKCB-201ENST00000303531 RTL3Q8N8U3 475 aaKnown RBP13.92□□□□□ -0.18
PRKCB-201ENST00000303531 SLC4A11Q8NBS3 891 aa13.92□□□□□ -0.18
PRKCB-201ENST00000303531 S100A13Q99584 98 aa13.92□□□□□ -0.18
PRKCB-201ENST00000303531 GBA3Q9H227 469 aa13.92□□□□□ -0.18
PRKCB-201ENST00000303531 DHX15O43143 795 aaKnown RBP13.92□□□□□ -0.18
PRKCB-201ENST00000303531 TUSC3Q13454 348 aa13.92□□□□□ -0.18
PRKCB-201ENST00000303531 MED22Q15528 200 aa13.92□□□□□ -0.18
PRKCB-201ENST00000303531 LENG1Q96BZ8 264 aaPredicted RBP13.92□□□□□ -0.18
PRKCB-201ENST00000303531 PPCDCQ96CD2 204 aa13.92□□□□□ -0.18
PRKCB-201ENST00000303531 ETAA1Q9NY74 926 aa13.92□□□□□ -0.18
PRKCB-201ENST00000303531 OR6C75A6NL08 312 aa13.92□□□□□ -0.18
PRKCB-201ENST00000303531 STAT5AP42229 794 aa13.92□□□□□ -0.18
PRKCB-201ENST00000303531 TTYH3Q9C0H2 523 aa13.92□□□□□ -0.18
PRKCB-201ENST00000303531 SOHLH2Q9NX45 425 aa13.92□□□□□ -0.18
PRKCB-201ENST00000303531 ASF1AQ9Y294 204 aa13.92□□□□□ -0.18
PRKCB-201ENST00000303531 PCDHGA4Q9Y5G9 962 aa13.92□□□□□ -0.18
PRKCB-201ENST00000303531 EME2A4GXA9 379 aaPredicted RBP13.91□□□□□ -0.18
PRKCB-201ENST00000303531 OR10H2O60403 315 aa13.91□□□□□ -0.18
PRKCB-201ENST00000303531 SERPINB7O75635 380 aa13.91□□□□□ -0.18
PRKCB-201ENST00000303531 RPL4P36578 427 aaKnown RBP13.91□□□□□ -0.18
PRKCB-201ENST00000303531 PTP4A2Q12974 167 aa13.91□□□□□ -0.18
PRKCB-201ENST00000303531 GPR158Q5T848 1215 aa13.91□□□□□ -0.18
PRKCB-201ENST00000303531 SLC26A9Q7LBE3 791 aa13.91□□□□□ -0.18
PRKCB-201ENST00000303531 C1orf127Q8N9H9 656 aa13.91□□□□□ -0.18
PRKCB-201ENST00000303531 ADCY4Q8NFM4 1077 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms