RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 TAB1Q15750 504 aa13.57□□□□□ -0.24
CHRFAM7A-201ENST00000299847 RGS21Q2M5E4 152 aa13.57□□□□□ -0.24
CHRFAM7A-201ENST00000299847 C9orf57Q5W0N0 161 aa13.57□□□□□ -0.24
CHRFAM7A-201ENST00000299847 GPR180Q86V85 440 aa13.57□□□□□ -0.24
CHRFAM7A-201ENST00000299847 KAT2AQ92830 837 aa13.57□□□□□ -0.24
CHRFAM7A-201ENST00000299847 IDI2Q9BXS1 227 aa13.57□□□□□ -0.24
CHRFAM7A-201ENST00000299847 PDK4Q16654 411 aa13.57□□□□□ -0.24
CHRFAM7A-201ENST00000299847 CUZD1Q86UP6 607 aa13.57□□□□□ -0.24
CHRFAM7A-201ENST00000299847 MAP4K5Q9Y4K4 846 aa13.57□□□□□ -0.24
CHRFAM7A-201ENST00000299847 UBIAD1Q9Y5Z9 338 aa13.57□□□□□ -0.24
CHRFAM7A-201ENST00000299847 A0A0J9YYE9 177 aa13.57□□□□□ -0.24
CHRFAM7A-201ENST00000299847 PSMD9O00233 223 aa13.57□□□□□ -0.24
CHRFAM7A-201ENST00000299847 FSBPO95073 299 aa13.57□□□□□ -0.24
CHRFAM7A-201ENST00000299847 STBD1O95210 358 aa13.57□□□□□ -0.24
CHRFAM7A-201ENST00000299847 NR4A1P22736 598 aa13.57□□□□□ -0.24
CHRFAM7A-201ENST00000299847 MYL9P24844 172 aa13.57□□□□□ -0.24
CHRFAM7A-201ENST00000299847 SLC26A3P40879 764 aa13.57□□□□□ -0.24
CHRFAM7A-201ENST00000299847 GABRB2P47870 512 aa13.57□□□□□ -0.24
CHRFAM7A-201ENST00000299847 LRRC73Q5JTD7 316 aa13.57□□□□□ -0.24
CHRFAM7A-201ENST00000299847 HJURPQ8NCD3 748 aaPredicted RBP13.57□□□□□ -0.24
CHRFAM7A-201ENST00000299847 OR52J3Q8NH60 311 aa13.57□□□□□ -0.24
CHRFAM7A-201ENST00000299847 COMMD9Q9P000 198 aa13.57□□□□□ -0.24
CHRFAM7A-201ENST00000299847 MSRAQ9UJ68 235 aa13.57□□□□□ -0.24
CHRFAM7A-201ENST00000299847 MGRN1O60291 552 aa13.57□□□□□ -0.24
CHRFAM7A-201ENST00000299847 PRKAR2AP13861 404 aaKnown RBP13.57□□□□□ -0.24
CHRFAM7A-201ENST00000299847 BMP7P18075 431 aa13.57□□□□□ -0.24
CHRFAM7A-201ENST00000299847 AKT2P31751 481 aa13.57□□□□□ -0.24
CHRFAM7A-201ENST00000299847 OR1D2P34982 312 aa13.57□□□□□ -0.24
CHRFAM7A-201ENST00000299847 WNT3AP56704 352 aa13.57□□□□□ -0.24
CHRFAM7A-201ENST00000299847 ZNF460Q14592 562 aa13.57□□□□□ -0.24
CHRFAM7A-201ENST00000299847 C6orf52Q5T4I8 152 aa13.57□□□□□ -0.24
CHRFAM7A-201ENST00000299847 PHF11Q9UIL8 331 aa13.57□□□□□ -0.24
CHRFAM7A-201ENST00000299847 ABCA9Q8IUA7 1624 aa13.57□□□□□ -0.24
CHRFAM7A-201ENST00000299847 BAZ2BQ9UIF8 2168 aaKnown RBP13.56□□□□□ -0.24
CHRFAM7A-201ENST00000299847 MFSD11O43934 449 aa13.56□□□□□ -0.24
CHRFAM7A-201ENST00000299847 STX11O75558 287 aa13.56□□□□□ -0.24
CHRFAM7A-201ENST00000299847 SPATA31C1P0DKV0 1188 aa13.56□□□□□ -0.24
CHRFAM7A-201ENST00000299847 SLC6A2P23975 617 aa13.56□□□□□ -0.24
CHRFAM7A-201ENST00000299847 CXCR2P25025 360 aa13.56□□□□□ -0.24
CHRFAM7A-201ENST00000299847 CLK3P49761 638 aaKnown RBP13.56□□□□□ -0.24
CHRFAM7A-201ENST00000299847 SEMG2Q02383 582 aa13.56□□□□□ -0.24
CHRFAM7A-201ENST00000299847 QPRTQ15274 297 aa13.56□□□□□ -0.24
CHRFAM7A-201ENST00000299847 PAGE2Q7Z2X7 111 aa13.56□□□□□ -0.24
CHRFAM7A-201ENST00000299847 SLC34A3Q8N130 599 aa13.56□□□□□ -0.24
CHRFAM7A-201ENST00000299847 TMEM199Q8N511 208 aa13.56□□□□□ -0.24
CHRFAM7A-201ENST00000299847 PTCD3Q96EY7 689 aaKnown RBP13.56□□□□□ -0.24
CHRFAM7A-201ENST00000299847 EBPLQ9BY08 206 aa13.56□□□□□ -0.24
CHRFAM7A-201ENST00000299847 AGO3Q9H9G7 860 aaKnown RBP13.56□□□□□ -0.24
CHRFAM7A-201ENST00000299847 CACNG4Q9UBN1 327 aa13.56□□□□□ -0.24
CHRFAM7A-201ENST00000299847 EVLQ9UI08 416 aaPredicted RBP13.56□□□□□ -0.24
CHRFAM7A-201ENST00000299847 NOS1APO75052 506 aaPredicted RBP13.56□□□□□ -0.24
CHRFAM7A-201ENST00000299847 SERPINA6P08185 405 aa13.56□□□□□ -0.24
CHRFAM7A-201ENST00000299847 MPP1Q00013 466 aa13.56□□□□□ -0.24
CHRFAM7A-201ENST00000299847 PHF13Q86YI8 300 aaPredicted RBP13.56□□□□□ -0.24
CHRFAM7A-201ENST00000299847 CLIP4Q8N3C7 705 aa13.56□□□□□ -0.24
CHRFAM7A-201ENST00000299847 PTPN18Q99952 460 aa13.56□□□□□ -0.24
CHRFAM7A-201ENST00000299847 ZNF670Q9BS34 389 aa13.56□□□□□ -0.24
CHRFAM7A-201ENST00000299847 CDADC1Q9BWV3 514 aa13.56□□□□□ -0.24
CHRFAM7A-201ENST00000299847 DUSP16Q9BY84 665 aa13.56□□□□□ -0.24
CHRFAM7A-201ENST00000299847 DPEP3Q9H4B8 488 aa13.56□□□□□ -0.24
CHRFAM7A-201ENST00000299847 SLC22A3O75751 556 aa13.56□□□□□ -0.24
CHRFAM7A-201ENST00000299847 ALAS2P22557 587 aa13.56□□□□□ -0.24
CHRFAM7A-201ENST00000299847 MTHFRP42898 656 aa13.56□□□□□ -0.24
CHRFAM7A-201ENST00000299847 CDK18Q07002 472 aa13.56□□□□□ -0.24
CHRFAM7A-201ENST00000299847 DUPD1Q68J44 220 aa13.56□□□□□ -0.24
CHRFAM7A-201ENST00000299847 ING5Q8WYH8 240 aa13.56□□□□□ -0.24
CHRFAM7A-201ENST00000299847 PMEPA1Q969W9 287 aa13.56□□□□□ -0.24
CHRFAM7A-201ENST00000299847 ALG2Q9H553 416 aa13.56□□□□□ -0.24
CHRFAM7A-201ENST00000299847 AP4B1Q9Y6B7 739 aa13.56□□□□□ -0.24
CHRFAM7A-201ENST00000299847 KLRG2A4D1S0 409 aaPredicted RBP13.56□□□□□ -0.24
CHRFAM7A-201ENST00000299847 TFPIP10646 304 aa13.56□□□□□ -0.24
CHRFAM7A-201ENST00000299847 MATKP42679 507 aa13.56□□□□□ -0.24
CHRFAM7A-201ENST00000299847 HNMTP50135 292 aa13.56□□□□□ -0.24
CHRFAM7A-201ENST00000299847 NRLP54845 237 aa13.56□□□□□ -0.24
CHRFAM7A-201ENST00000299847 SKP1P63208 163 aa13.56□□□□□ -0.24
CHRFAM7A-201ENST00000299847 LGALS3BPQ08380 585 aa13.56□□□□□ -0.24
CHRFAM7A-201ENST00000299847 IL18R1Q13478 541 aa13.56□□□□□ -0.24
CHRFAM7A-201ENST00000299847 SUZ12Q15022 739 aaKnown RBP13.56□□□□□ -0.24
CHRFAM7A-201ENST00000299847 UBE2E3Q969T4 207 aa13.56□□□□□ -0.24
CHRFAM7A-201ENST00000299847 HBEGFQ99075 208 aa13.56□□□□□ -0.24
CHRFAM7A-201ENST00000299847 LRRC19Q9H756 370 aa13.56□□□□□ -0.24
CHRFAM7A-201ENST00000299847 PCDH18Q9HCL0 1135 aa13.56□□□□□ -0.24
CHRFAM7A-201ENST00000299847 TBC1D30Q9Y2I9 924 aa13.56□□□□□ -0.24
CHRFAM7A-201ENST00000299847 TCRBV7S2A1N4TA0A589 114 aa13.55□□□□□ -0.24
CHRFAM7A-201ENST00000299847 F7P08709 466 aaPredicted RBP13.55□□□□□ -0.24
CHRFAM7A-201ENST00000299847 RPL9P32969 192 aaKnown RBP13.55□□□□□ -0.24
CHRFAM7A-201ENST00000299847 C12orf50Q8NA57 414 aaPredicted RBP13.55□□□□□ -0.24
CHRFAM7A-201ENST00000299847 RP9Q8TA86 221 aaKnown RBP13.55□□□□□ -0.24
CHRFAM7A-201ENST00000299847 PPM1MQ96MI6 270 aa13.55□□□□□ -0.24
CHRFAM7A-201ENST00000299847 GPN3Q9UHW5 284 aaPredicted RBP13.55□□□□□ -0.24
CHRFAM7A-201ENST00000299847 PSMD13Q9UNM6 376 aa13.55□□□□□ -0.24
CHRFAM7A-201ENST00000299847 FASTKD3Q14CZ7 662 aaKnown RBP13.55□□□□□ -0.24
CHRFAM7A-201ENST00000299847 SF1Q15637 639 aaKnown RBP13.55□□□□□ -0.24
CHRFAM7A-201ENST00000299847 GPR158Q5T848 1215 aa13.55□□□□□ -0.24
CHRFAM7A-201ENST00000299847 HECTD2Q5U5R9 776 aa13.55□□□□□ -0.24
CHRFAM7A-201ENST00000299847 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.55□□□□□ -0.24
CHRFAM7A-201ENST00000299847 CD101Q93033 1021 aa13.55□□□□□ -0.24
CHRFAM7A-201ENST00000299847 NXNL1Q96CM4 212 aa13.55□□□□□ -0.24
CHRFAM7A-201ENST00000299847 TTLL2Q9BWV7 592 aa13.55□□□□□ -0.24
CHRFAM7A-201ENST00000299847 SUV39H1O43463 412 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms