RNA–Protein interactions for RNA: ENST00000296550.11

DCLK2-201, Transcript of doublecortin like kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DCLK2, Length 4,265 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DCLK2-201ENST00000296550 KRT6AP02538 564 aa16.31■□□□□ 0.2
DCLK2-201ENST00000296550 KRT6BP04259 564 aa16.31■□□□□ 0.2
DCLK2-201ENST00000296550 KRT6CP48668 564 aa16.31■□□□□ 0.2
DCLK2-201ENST00000296550 IKBKEQ14164 716 aa16.31■□□□□ 0.2
DCLK2-201ENST00000296550 VPS26BQ4G0F5 336 aa16.31■□□□□ 0.2
DCLK2-201ENST00000296550 FAM120BQ96EK7 910 aaKnown RBP16.31■□□□□ 0.2
DCLK2-201ENST00000296550 PAAF1Q9BRP4 392 aa16.31■□□□□ 0.2
DCLK2-201ENST00000296550 LIMD1Q9UGP4 676 aa16.31■□□□□ 0.2
DCLK2-201ENST00000296550 HS3ST4Q9Y661 456 aa16.31■□□□□ 0.2
DCLK2-201ENST00000296550 UBXN8O00124 270 aa16.31■□□□□ 0.2
DCLK2-201ENST00000296550 ALDH1A2O94788 518 aa16.31■□□□□ 0.2
DCLK2-201ENST00000296550 MTX3Q5HYI7 312 aa16.31■□□□□ 0.2
DCLK2-201ENST00000296550 CLVS1Q8IUQ0 354 aaPredicted RBP16.31■□□□□ 0.2
DCLK2-201ENST00000296550 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.31■□□□□ 0.2
DCLK2-201ENST00000296550 FBXO27Q8NI29 283 aa16.31■□□□□ 0.2
DCLK2-201ENST00000296550 TWIST2Q8WVJ9 160 aa16.31■□□□□ 0.2
DCLK2-201ENST00000296550 SH3KBP1Q96B97 665 aa16.31■□□□□ 0.2
DCLK2-201ENST00000296550 FOPNLQ96NB1 174 aa16.31■□□□□ 0.2
DCLK2-201ENST00000296550 SH3GL1Q99961 368 aa16.31■□□□□ 0.2
DCLK2-201ENST00000296550 CIPCQ9C0C6 399 aa16.31■□□□□ 0.2
DCLK2-201ENST00000296550 KLQ9UEF7 1012 aa16.31■□□□□ 0.2
DCLK2-201ENST00000296550 LEF1Q9UJU2 399 aaPredicted RBP16.31■□□□□ 0.2
DCLK2-201ENST00000296550 TNPO3Q9Y5L0 923 aaKnown RBP16.31■□□□□ 0.2
DCLK2-201ENST00000296550 ADAMTSL1Q8N6G6 1762 aa16.3■□□□□ 0.2
DCLK2-201ENST00000296550 ZBTB14O43829 449 aa16.3■□□□□ 0.2
DCLK2-201ENST00000296550 GJA5P36382 358 aa16.3■□□□□ 0.2
DCLK2-201ENST00000296550 TRAF2Q12933 501 aa16.3■□□□□ 0.2
DCLK2-201ENST00000296550 PRKG2Q13237 762 aa16.3■□□□□ 0.2
DCLK2-201ENST00000296550 PKDCCQ504Y2 493 aa16.3■□□□□ 0.2
DCLK2-201ENST00000296550 C6orf52Q5T4I8 152 aa16.3■□□□□ 0.2
DCLK2-201ENST00000296550 RBM44Q6ZP01 1051 aaKnown RBP16.3■□□□□ 0.2
DCLK2-201ENST00000296550 MAGEE2Q8TD90 523 aaPredicted RBP16.3■□□□□ 0.2
DCLK2-201ENST00000296550 STYXQ8WUJ0 223 aa16.3■□□□□ 0.2
DCLK2-201ENST00000296550 GPR21Q99679 349 aa16.3■□□□□ 0.2
DCLK2-201ENST00000296550 OXCT2Q9BYC2 517 aaPredicted RBP16.3■□□□□ 0.2
DCLK2-201ENST00000296550 OPTCQ9UBM4 332 aa16.3■□□□□ 0.2
DCLK2-201ENST00000296550 COPG1Q9Y678 874 aaKnown RBP16.3■□□□□ 0.2
DCLK2-201ENST00000296550 UBR3Q6ZT12 1888 aa16.3■□□□□ 0.2
DCLK2-201ENST00000296550 TMEM88BA6NKF7 163 aa16.3■□□□□ 0.2
DCLK2-201ENST00000296550 HNRNPCP07910 306 aaKnown RBP eCLIP16.3■□□□□ 0.2
DCLK2-201ENST00000296550 IDO1P14902 403 aa16.3■□□□□ 0.2
DCLK2-201ENST00000296550 CTPS1P17812 591 aa16.3■□□□□ 0.2
DCLK2-201ENST00000296550 CDH2P19022 906 aaPredicted RBP16.3■□□□□ 0.2
DCLK2-201ENST00000296550 TRIM25Q14258 630 aaKnown RBP16.3■□□□□ 0.2
DCLK2-201ENST00000296550 PGS1Q32NB8 556 aa16.3■□□□□ 0.2
DCLK2-201ENST00000296550 ARHGAP15Q53QZ3 475 aa16.3■□□□□ 0.2
DCLK2-201ENST00000296550 PAOXQ6QHF9 649 aa16.3■□□□□ 0.2
DCLK2-201ENST00000296550 ITIH5Q86UX2 942 aa16.3■□□□□ 0.2
DCLK2-201ENST00000296550 TBCDQ9BTW9 1192 aa16.3■□□□□ 0.2
DCLK2-201ENST00000296550 PCDHGC4Q9Y5F7 938 aa16.3■□□□□ 0.2
DCLK2-201ENST00000296550 FFAR3O14843 346 aa16.3■□□□□ 0.2
DCLK2-201ENST00000296550 GPR42O15529 346 aa16.3■□□□□ 0.2
DCLK2-201ENST00000296550 IL1BP01584 269 aa16.3■□□□□ 0.2
DCLK2-201ENST00000296550 PKMP14618 531 aaKnown RBP16.3■□□□□ 0.2
DCLK2-201ENST00000296550 IL10RBQ08334 325 aa16.3■□□□□ 0.2
DCLK2-201ENST00000296550 ZBTB6Q15916 424 aa16.3■□□□□ 0.2
DCLK2-201ENST00000296550 AGMOQ6ZNB7 445 aa16.3■□□□□ 0.2
DCLK2-201ENST00000296550 SUSD3Q96L08 255 aa16.3■□□□□ 0.2
DCLK2-201ENST00000296550 DEFB118Q96PH6 123 aa16.3■□□□□ 0.2
DCLK2-201ENST00000296550 BTBD9Q96Q07 612 aa16.3■□□□□ 0.2
DCLK2-201ENST00000296550 DCUN1D5Q9BTE7 237 aa16.3■□□□□ 0.2
DCLK2-201ENST00000296550 MIOSQ9NXC5 875 aa16.3■□□□□ 0.2
DCLK2-201ENST00000296550 A8MT66 165 aa16.29■□□□□ 0.2
DCLK2-201ENST00000296550 TRIP4Q15650 581 aaPredicted RBP16.29■□□□□ 0.2
DCLK2-201ENST00000296550 REP15Q6BDI9 236 aa16.29■□□□□ 0.2
DCLK2-201ENST00000296550 TPGS1Q6ZTW0 290 aa16.29■□□□□ 0.2
DCLK2-201ENST00000296550 DBF4BQ8NFT6 615 aa16.29■□□□□ 0.2
DCLK2-201ENST00000296550 ITFG1Q8TB96 612 aa16.29■□□□□ 0.2
DCLK2-201ENST00000296550 B3GALT6Q96L58 329 aa16.29■□□□□ 0.2
DCLK2-201ENST00000296550 TUBGCP5Q96RT8 1024 aa16.29■□□□□ 0.2
DCLK2-201ENST00000296550 FAM126AQ9BYI3 521 aaPredicted RBP16.29■□□□□ 0.2
DCLK2-201ENST00000296550 PCDHAC1Q9H158 963 aa16.29■□□□□ 0.2
DCLK2-201ENST00000296550 SMOC2Q9H3U7 446 aa16.29■□□□□ 0.2
DCLK2-201ENST00000296550 RGS17Q9UGC6 210 aaPredicted RBP16.29■□□□□ 0.2
DCLK2-201ENST00000296550 A0A087WXM4 84 aa16.29■□□□□ 0.2
DCLK2-201ENST00000296550 HALP42357 657 aa16.29■□□□□ 0.2
DCLK2-201ENST00000296550 NR1H2P55055 460 aa16.29■□□□□ 0.2
DCLK2-201ENST00000296550 GNA12Q03113 381 aa16.29■□□□□ 0.2
DCLK2-201ENST00000296550 PITRM1Q5JRX3 1037 aa16.29■□□□□ 0.2
DCLK2-201ENST00000296550 FBXL22Q6P050 247 aa16.29■□□□□ 0.2
DCLK2-201ENST00000296550 TMEM209Q96SK2 561 aa16.29■□□□□ 0.2
DCLK2-201ENST00000296550 TTPALQ9BTX7 342 aa16.29■□□□□ 0.2
DCLK2-201ENST00000296550 TLR6Q9Y2C9 796 aa16.29■□□□□ 0.2
DCLK2-201ENST00000296550 Q9Y3F1 56 aa16.29■□□□□ 0.2
DCLK2-201ENST00000296550 ZNF711Q9Y462 761 aa16.29■□□□□ 0.2
DCLK2-201ENST00000296550 THSD7AQ9UPZ6 1657 aa16.29■□□□□ 0.2
DCLK2-201ENST00000296550 CAPN15O75808 1086 aa16.29■□□□□ 0.2
DCLK2-201ENST00000296550 HDCP19113 662 aa16.29■□□□□ 0.2
DCLK2-201ENST00000296550 SMAD3P84022 425 aaKnown RBP16.29■□□□□ 0.2
DCLK2-201ENST00000296550 B3GNT6Q6ZMB0 384 aa16.29■□□□□ 0.2
DCLK2-201ENST00000296550 OR13C4Q8NGS5 318 aa16.29■□□□□ 0.2
DCLK2-201ENST00000296550 ARNTL2Q8WYA1 636 aa16.29■□□□□ 0.2
DCLK2-201ENST00000296550 TCF12Q99081 682 aa16.29■□□□□ 0.2
DCLK2-201ENST00000296550 WDR83Q9BRX9 315 aaKnown RBP16.29■□□□□ 0.2
DCLK2-201ENST00000296550 OSBPL11Q9BXB4 747 aa16.29■□□□□ 0.2
DCLK2-201ENST00000296550 COMMD3-BMI1R4GMX3 469 aa16.29■□□□□ 0.2
DCLK2-201ENST00000296550 NPEPPSL1A6NEC2 478 aa16.28■□□□□ 0.2
DCLK2-201ENST00000296550 UNCXA6NJT0 531 aa16.28■□□□□ 0.2
DCLK2-201ENST00000296550 ZNF682O95780 498 aa16.28■□□□□ 0.2
DCLK2-201ENST00000296550 VAC14Q08AM6 782 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms