RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 RALGPS2Q86X27 583 aaPredicted RBP13.45□□□□□ -0.26
HPS3-201ENST00000296051 SIAH1Q8IUQ4 282 aa13.45□□□□□ -0.26
HPS3-201ENST00000296051 TMEM192Q8IY95 271 aa13.45□□□□□ -0.26
HPS3-201ENST00000296051 SPATA22Q8NHS9 363 aa13.45□□□□□ -0.26
HPS3-201ENST00000296051 DHX33Q9H6R0 707 aaKnown RBP13.45□□□□□ -0.26
HPS3-201ENST00000296051 RAB26Q9ULW5 256 aa13.45□□□□□ -0.26
HPS3-201ENST00000296051 GNG14A0A1W2PPG7 69 aa13.44□□□□□ -0.26
HPS3-201ENST00000296051 HNRNPCL2B2RXH8 293 aa13.44□□□□□ -0.26
HPS3-201ENST00000296051 CPSF4O95639 269 aaKnown RBP13.44□□□□□ -0.26
HPS3-201ENST00000296051 ADSLP30566 484 aaPredicted RBP13.44□□□□□ -0.26
HPS3-201ENST00000296051 FMO4P31512 558 aa13.44□□□□□ -0.26
HPS3-201ENST00000296051 MON1AQ86VX9 555 aa13.44□□□□□ -0.26
HPS3-201ENST00000296051 DENND6AQ8IWF6 608 aa13.44□□□□□ -0.26
HPS3-201ENST00000296051 PGAM4Q8N0Y7 254 aa13.44□□□□□ -0.26
HPS3-201ENST00000296051 VMP1Q96GC9 406 aa13.44□□□□□ -0.26
HPS3-201ENST00000296051 ABHD8Q96I13 439 aa13.44□□□□□ -0.26
HPS3-201ENST00000296051 MTF2Q9Y483 593 aaPredicted RBP13.44□□□□□ -0.26
HPS3-201ENST00000296051 PSAT1Q9Y617 370 aa13.44□□□□□ -0.26
HPS3-201ENST00000296051 NDUFB5O43674 189 aa13.44□□□□□ -0.26
HPS3-201ENST00000296051 OAS1P00973 400 aaKnown RBP13.44□□□□□ -0.26
HPS3-201ENST00000296051 HPGDP15428 266 aa13.44□□□□□ -0.26
HPS3-201ENST00000296051 NCK1P16333 377 aa13.44□□□□□ -0.26
HPS3-201ENST00000296051 LBPP18428 481 aa13.44□□□□□ -0.26
HPS3-201ENST00000296051 PDSS2Q86YH6 399 aa13.44□□□□□ -0.26
HPS3-201ENST00000296051 C8orf59Q8N0T1 100 aaPredicted RBP13.44□□□□□ -0.26
HPS3-201ENST00000296051 PTCD3Q96EY7 689 aaKnown RBP13.44□□□□□ -0.26
HPS3-201ENST00000296051 COMMD8Q9NX08 183 aa13.44□□□□□ -0.26
HPS3-201ENST00000296051 TEX264Q9Y6I9 313 aa13.44□□□□□ -0.26
HPS3-201ENST00000296051 ADH1CP00326 375 aa13.44□□□□□ -0.26
HPS3-201ENST00000296051 DNTTP04053 509 aa13.44□□□□□ -0.26
HPS3-201ENST00000296051 C8AP07357 584 aa13.44□□□□□ -0.26
HPS3-201ENST00000296051 HSPA14Q0VDF9 509 aa13.44□□□□□ -0.26
HPS3-201ENST00000296051 PPP1R8Q12972 351 aaKnown RBP13.44□□□□□ -0.26
HPS3-201ENST00000296051 TP53BP2Q13625 1128 aa13.44□□□□□ -0.26
HPS3-201ENST00000296051 PAGE2BQ5JRK9 111 aa13.44□□□□□ -0.26
HPS3-201ENST00000296051 PRSS55Q6UWB4 352 aaPredicted RBP13.44□□□□□ -0.26
HPS3-201ENST00000296051 USP45Q70EL2 814 aa13.44□□□□□ -0.26
HPS3-201ENST00000296051 CUZD1Q86UP6 607 aa13.44□□□□□ -0.26
HPS3-201ENST00000296051 RASAL3Q86YV0 1011 aa13.44□□□□□ -0.26
HPS3-201ENST00000296051 HTRA1Q92743 480 aa13.44□□□□□ -0.26
HPS3-201ENST00000296051 CCDC28BQ9BUN5 200 aa13.44□□□□□ -0.26
HPS3-201ENST00000296051 CEP44Q9C0F1 390 aa13.44□□□□□ -0.26
HPS3-201ENST00000296051 SYTL2Q9HCH5 934 aa13.44□□□□□ -0.26
HPS3-201ENST00000296051 TIMMDC1Q9NPL8 285 aa13.44□□□□□ -0.26
HPS3-201ENST00000296051 RNF186Q9NXI6 227 aa13.44□□□□□ -0.26
HPS3-201ENST00000296051 GABRQQ9UN88 632 aa13.44□□□□□ -0.26
HPS3-201ENST00000296051 TRAF6Q9Y4K3 522 aa13.44□□□□□ -0.26
HPS3-201ENST00000296051 KIF13AQ9H1H9 1805 aa13.43□□□□□ -0.26
HPS3-201ENST00000296051 TMEM114B3SHH9 223 aa13.43□□□□□ -0.26
HPS3-201ENST00000296051 FAM20BO75063 409 aa13.43□□□□□ -0.26
HPS3-201ENST00000296051 TSC22D2O75157 780 aa13.43□□□□□ -0.26
HPS3-201ENST00000296051 CYP4B1P13584 511 aa13.43□□□□□ -0.26
HPS3-201ENST00000296051 JAK1P23458 1154 aa13.43□□□□□ -0.26
HPS3-201ENST00000296051 SEPHS1P49903 392 aa13.43□□□□□ -0.26
HPS3-201ENST00000296051 ZC3H12BQ5HYM0 836 aaKnown RBP13.43□□□□□ -0.26
HPS3-201ENST00000296051 RAET1GQ6H3X3 334 aa13.43□□□□□ -0.26
HPS3-201ENST00000296051 RNF19BQ6ZMZ0 732 aa13.43□□□□□ -0.26
HPS3-201ENST00000296051 FSTL5Q8N475 847 aaPredicted RBP13.43□□□□□ -0.26
HPS3-201ENST00000296051 CDYL2Q8N8U2 506 aa13.43□□□□□ -0.26
HPS3-201ENST00000296051 TIMM22Q9Y584 194 aa13.43□□□□□ -0.26
HPS3-201ENST00000296051 A0A0J9YYE9 177 aa13.43□□□□□ -0.26
HPS3-201ENST00000296051 ZW10O43264 779 aa13.43□□□□□ -0.26
HPS3-201ENST00000296051 CBFA2T3O75081 653 aa13.43□□□□□ -0.26
HPS3-201ENST00000296051 LTA4HP09960 611 aaKnown RBP13.43□□□□□ -0.26
HPS3-201ENST00000296051 ZNF37AP17032 561 aaPredicted RBP13.43□□□□□ -0.26
HPS3-201ENST00000296051 SQLEQ14534 574 aa13.43□□□□□ -0.26
HPS3-201ENST00000296051 OGFOD2Q6N063 350 aa13.43□□□□□ -0.26
HPS3-201ENST00000296051 RPS27LQ71UM5 84 aaKnown RBP13.43□□□□□ -0.26
HPS3-201ENST00000296051 MTSS1LQ765P7 747 aa13.43□□□□□ -0.26
HPS3-201ENST00000296051 POC5Q8NA72 575 aa13.43□□□□□ -0.26
HPS3-201ENST00000296051 AUTS2Q8WXX7 1259 aa13.43□□□□□ -0.26
HPS3-201ENST00000296051 PPM1MQ96MI6 270 aa13.43□□□□□ -0.26
HPS3-201ENST00000296051 LHX5Q9H2C1 402 aa13.43□□□□□ -0.26
HPS3-201ENST00000296051 MPP6Q9NZW5 540 aa13.43□□□□□ -0.26
HPS3-201ENST00000296051 TRHDEQ9UKU6 1024 aa13.43□□□□□ -0.26
HPS3-201ENST00000296051 ANKRD6Q9Y2G4 727 aa13.43□□□□□ -0.26
HPS3-201ENST00000296051 COL1A2P08123 1366 aa13.43□□□□□ -0.26
HPS3-201ENST00000296051 RGPD2P0DJD1 1756 aa13.43□□□□□ -0.26
HPS3-201ENST00000296051 KLHL33A6NCF5 533 aa13.43□□□□□ -0.26
HPS3-201ENST00000296051 DBTP11182 482 aaKnown RBP13.43□□□□□ -0.26
HPS3-201ENST00000296051 VEGFBP49765 207 aa13.43□□□□□ -0.26
HPS3-201ENST00000296051 SLC18A1P54219 525 aa13.43□□□□□ -0.26
HPS3-201ENST00000296051 BNIP3Q12983 259 aa13.43□□□□□ -0.26
HPS3-201ENST00000296051 PCID2Q5JVF3 399 aa13.43□□□□□ -0.26
HPS3-201ENST00000296051 OLFML1Q6UWY5 402 aa13.43□□□□□ -0.26
HPS3-201ENST00000296051 ZNF567Q8N184 647 aa13.43□□□□□ -0.26
HPS3-201ENST00000296051 KREMEN2Q8NCW0 462 aa13.43□□□□□ -0.26
HPS3-201ENST00000296051 ACTRT2Q8TDY3 377 aa13.43□□□□□ -0.26
HPS3-201ENST00000296051 KCTD15Q96SI1 283 aaPredicted RBP13.43□□□□□ -0.26
HPS3-201ENST00000296051 SH3GL1Q99961 368 aa13.43□□□□□ -0.26
HPS3-201ENST00000296051 HGH1Q9BTY7 390 aa13.43□□□□□ -0.26
HPS3-201ENST00000296051 ZNF556Q9HAH1 456 aa13.43□□□□□ -0.26
HPS3-201ENST00000296051 DNAJC28Q9NX36 388 aa13.43□□□□□ -0.26
HPS3-201ENST00000296051 EIF3LQ9Y262 564 aaKnown RBP13.43□□□□□ -0.26
HPS3-201ENST00000296051 CEP290O15078 2479 aa13.43□□□□□ -0.26
HPS3-201ENST00000296051 KCPQ6ZWJ8 1503 aa13.43□□□□□ -0.26
HPS3-201ENST00000296051 TAF4O00268 1085 aa13.43□□□□□ -0.26
HPS3-201ENST00000296051 DHX15O43143 795 aaKnown RBP13.43□□□□□ -0.26
HPS3-201ENST00000296051 CYP7B1O75881 506 aa13.43□□□□□ -0.26
HPS3-201ENST00000296051 STAU1O95793 577 aaKnown RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms