RNA–Protein interactions for RNA: ENST00000294816.6

LMX1A-201, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,350 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-201ENST00000294816 SPATA33Q96N06 139 aa10.27□□□□□ -0.77
LMX1A-201ENST00000294816 ZMAT2Q96NC0 199 aaKnown RBP10.27□□□□□ -0.77
LMX1A-201ENST00000294816 KCNA7Q96RP8 456 aa10.27□□□□□ -0.77
LMX1A-201ENST00000294816 SLC30A3Q99726 388 aa10.27□□□□□ -0.77
LMX1A-201ENST00000294816 C11orf84Q9BUA3 381 aaPredicted RBP10.27□□□□□ -0.77
LMX1A-201ENST00000294816 BDH2Q9BUT1 245 aa10.27□□□□□ -0.77
LMX1A-201ENST00000294816 MROQ9BYG7 248 aa10.27□□□□□ -0.77
LMX1A-201ENST00000294816 RCOR3Q9P2K3 495 aaPredicted RBP10.27□□□□□ -0.77
LMX1A-201ENST00000294816 B3GNT3Q9Y2A9 372 aa10.27□□□□□ -0.77
LMX1A-201ENST00000294816 ANKRD31Q8N7Z5 1873 aa10.27□□□□□ -0.77
LMX1A-201ENST00000294816 LY75O60449 1722 aa10.27□□□□□ -0.77
LMX1A-201ENST00000294816 LRRC14BA6NHZ5 514 aa10.26□□□□□ -0.77
LMX1A-201ENST00000294816 CCL22O00626 93 aa10.26□□□□□ -0.77
LMX1A-201ENST00000294816 PIP5K1BO14986 540 aa10.26□□□□□ -0.77
LMX1A-201ENST00000294816 SEC14L2O76054 403 aa10.26□□□□□ -0.77
LMX1A-201ENST00000294816 LTA4HP09960 611 aaKnown RBP10.26□□□□□ -0.77
LMX1A-201ENST00000294816 CYP2C9P11712 490 aa10.26□□□□□ -0.77
LMX1A-201ENST00000294816 HGFP14210 728 aa10.26□□□□□ -0.77
LMX1A-201ENST00000294816 ICAM3P32942 547 aa10.26□□□□□ -0.77
LMX1A-201ENST00000294816 BAG6P46379 1132 aa10.26□□□□□ -0.77
LMX1A-201ENST00000294816 PHKG1Q16816 387 aa10.26□□□□□ -0.77
LMX1A-201ENST00000294816 TECRLQ5HYJ1 363 aa10.26□□□□□ -0.77
LMX1A-201ENST00000294816 PCID2Q5JVF3 399 aa10.26□□□□□ -0.77
LMX1A-201ENST00000294816 TAF2Q6P1X5 1199 aa10.26□□□□□ -0.77
LMX1A-201ENST00000294816 SCIMPQ6UWF3 145 aa10.26□□□□□ -0.77
LMX1A-201ENST00000294816 METTL7BQ6UX53 244 aa10.26□□□□□ -0.77
LMX1A-201ENST00000294816 RNF19BQ6ZMZ0 732 aa10.26□□□□□ -0.77
LMX1A-201ENST00000294816 CCDC81Q6ZN84 652 aa10.26□□□□□ -0.77
LMX1A-201ENST00000294816 SLC22A16Q86VW1 577 aa10.26□□□□□ -0.77
LMX1A-201ENST00000294816 COLGALT2Q8IYK4 626 aa10.26□□□□□ -0.77
LMX1A-201ENST00000294816 TBC1D21Q8IYX1 336 aa10.26□□□□□ -0.77
LMX1A-201ENST00000294816 C8orf59Q8N0T1 100 aaPredicted RBP10.26□□□□□ -0.77
LMX1A-201ENST00000294816 RNF34Q969K3 372 aa10.26□□□□□ -0.77
LMX1A-201ENST00000294816 SDCCAG3Q96C92 435 aa10.26□□□□□ -0.77
LMX1A-201ENST00000294816 TBL1YQ9BQ87 522 aa10.26□□□□□ -0.77
LMX1A-201ENST00000294816 MED10Q9BTT4 135 aa10.26□□□□□ -0.77
LMX1A-201ENST00000294816 KIAA1522Q9P206 1035 aaPredicted RBP10.26□□□□□ -0.77
LMX1A-201ENST00000294816 TMA7Q9Y2S6 64 aaKnown RBP10.26□□□□□ -0.77
LMX1A-201ENST00000294816 TMEM98Q9Y2Y6 226 aa10.26□□□□□ -0.77
LMX1A-201ENST00000294816 C16orf96A6NNT2 1141 aa10.26□□□□□ -0.77
LMX1A-201ENST00000294816 ERI2A8K979 691 aaKnown RBP10.26□□□□□ -0.77
LMX1A-201ENST00000294816 DCLK1O15075 740 aa10.26□□□□□ -0.77
LMX1A-201ENST00000294816 NOBOXO60393 691 aa10.26□□□□□ -0.77
LMX1A-201ENST00000294816 SIX3O95343 332 aaPredicted RBP10.26□□□□□ -0.77
LMX1A-201ENST00000294816 CPNE6O95741 557 aa10.26□□□□□ -0.77
LMX1A-201ENST00000294816 PTPRAP18433 802 aa10.26□□□□□ -0.77
LMX1A-201ENST00000294816 CHRNA4P43681 627 aa10.26□□□□□ -0.77
LMX1A-201ENST00000294816 FPGSQ05932 587 aa10.26□□□□□ -0.77
LMX1A-201ENST00000294816 NOMO2Q5JPE7 1267 aa10.26□□□□□ -0.77
LMX1A-201ENST00000294816 TMEM236Q5W0B7 351 aa10.26□□□□□ -0.77
LMX1A-201ENST00000294816 KCTD11Q693B1 232 aa10.26□□□□□ -0.77
LMX1A-201ENST00000294816 HACD2Q6Y1H2 254 aa10.26□□□□□ -0.77
LMX1A-201ENST00000294816 LARP4Q71RC2 724 aaKnown RBP eCLIP10.26□□□□□ -0.77
LMX1A-201ENST00000294816 THAP5Q7Z6K1 395 aa10.26□□□□□ -0.77
LMX1A-201ENST00000294816 CTU1Q7Z7A3 348 aaKnown RBP10.26□□□□□ -0.77
LMX1A-201ENST00000294816 OR52K2Q8NGK3 314 aa10.26□□□□□ -0.77
LMX1A-201ENST00000294816 PNPT1Q8TCS8 783 aaKnown RBP10.26□□□□□ -0.77
LMX1A-201ENST00000294816 CCDC126Q96EE4 140 aa10.26□□□□□ -0.77
LMX1A-201ENST00000294816 MAGED4Q96JG8 741 aa10.26□□□□□ -0.77
LMX1A-201ENST00000294816 FSD1LQ9BXM9 530 aa10.26□□□□□ -0.77
LMX1A-201ENST00000294816 TDRD1Q9BXT4 1180 aaKnown RBP10.26□□□□□ -0.77
LMX1A-201ENST00000294816 WDR12Q9GZL7 423 aaKnown RBP10.26□□□□□ -0.77
LMX1A-201ENST00000294816 TPK1Q9H3S4 243 aa10.26□□□□□ -0.77
LMX1A-201ENST00000294816 PLEKHA5Q9HAU0 1116 aa10.26□□□□□ -0.77
LMX1A-201ENST00000294816 ABCB10Q9NRK6 738 aa10.26□□□□□ -0.77
LMX1A-201ENST00000294816 IGSF5Q9NSI5 407 aa10.26□□□□□ -0.77
LMX1A-201ENST00000294816 INTS10Q9NVR2 710 aaKnown RBP10.26□□□□□ -0.77
LMX1A-201ENST00000294816 EVLQ9UI08 416 aaPredicted RBP10.26□□□□□ -0.77
LMX1A-201ENST00000294816 UBR3Q6ZT12 1888 aa10.26□□□□□ -0.77
LMX1A-201ENST00000294816 EP400Q96L91 3159 aa10.26□□□□□ -0.77
LMX1A-201ENST00000294816 SYCE1LA8MT33 242 aa10.26□□□□□ -0.77
LMX1A-201ENST00000294816 BBIP1A8MTZ0 92 aa10.26□□□□□ -0.77
LMX1A-201ENST00000294816 ZBTB42B2RXF5 422 aa10.26□□□□□ -0.77
LMX1A-201ENST00000294816 GNGT2O14610 69 aa10.26□□□□□ -0.77
LMX1A-201ENST00000294816 DEAF1O75398 565 aaPredicted RBP10.26□□□□□ -0.77
LMX1A-201ENST00000294816 INMTO95050 263 aa10.26□□□□□ -0.77
LMX1A-201ENST00000294816 ARIH2O95376 493 aa10.26□□□□□ -0.77
LMX1A-201ENST00000294816 THRBP10828 461 aa10.26□□□□□ -0.77
LMX1A-201ENST00000294816 AXLP30530 894 aa10.26□□□□□ -0.77
LMX1A-201ENST00000294816 ARL1P40616 181 aaPredicted RBP10.26□□□□□ -0.77
LMX1A-201ENST00000294816 IST1P53990 364 aa10.26□□□□□ -0.77
LMX1A-201ENST00000294816 KCNK10P57789 538 aa10.26□□□□□ -0.77
LMX1A-201ENST00000294816 DNAJB13P59910 316 aa10.26□□□□□ -0.77
LMX1A-201ENST00000294816 IL1RL1Q01638 556 aa10.26□□□□□ -0.77
LMX1A-201ENST00000294816 KCNC4Q03721 635 aa10.26□□□□□ -0.77
LMX1A-201ENST00000294816 INAVAQ3KP66 663 aa10.26□□□□□ -0.77
LMX1A-201ENST00000294816 GPR158Q5T848 1215 aa10.26□□□□□ -0.77
LMX1A-201ENST00000294816 NBPF12Q5TAG4 269 aaPredicted RBP10.26□□□□□ -0.77
LMX1A-201ENST00000294816 FKBP1CQ5VVH2 108 aa10.26□□□□□ -0.77
LMX1A-201ENST00000294816 NEPROQ6NW34 567 aa10.26□□□□□ -0.77
LMX1A-201ENST00000294816 OR7A2PQ8NGA2 310 aa10.26□□□□□ -0.77
LMX1A-201ENST00000294816 OR6P1Q8NGX9 317 aa10.26□□□□□ -0.77
LMX1A-201ENST00000294816 PSMA8Q8TAA3 256 aa10.26□□□□□ -0.77
LMX1A-201ENST00000294816 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.26□□□□□ -0.77
LMX1A-201ENST00000294816 SIK2Q9H0K1 926 aa10.26□□□□□ -0.77
LMX1A-201ENST00000294816 SMURF2Q9HAU4 748 aa10.26□□□□□ -0.77
LMX1A-201ENST00000294816 HACD3Q9P035 362 aa10.26□□□□□ -0.77
LMX1A-201ENST00000294816 KLQ9UEF7 1012 aa10.26□□□□□ -0.77
LMX1A-201ENST00000294816 FXYD1O00168 92 aa10.25□□□□□ -0.77
LMX1A-201ENST00000294816 GAS2O43903 313 aaKnown RBP10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms