RNA–Protein interactions for RNA: ENST00000291458.9

CCDC58-201, Transcript of coiled-coil domain containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC58, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-201ENST00000291458 FUBP1Q96AE4 644 aaKnown RBP9.78□□□□□ -0.84
CCDC58-201ENST00000291458 HDAC11Q96DB2 347 aa9.78□□□□□ -0.84
CCDC58-201ENST00000291458 IFT43Q96FT9 208 aa9.78□□□□□ -0.84
CCDC58-201ENST00000291458 AGAP3Q96P47 875 aa9.78□□□□□ -0.84
CCDC58-201ENST00000291458 DUSP23Q9BVJ7 150 aa9.78□□□□□ -0.84
CCDC58-201ENST00000291458 LGR4Q9BXB1 951 aa9.78□□□□□ -0.84
CCDC58-201ENST00000291458 CYP4F12Q9HCS2 524 aa9.78□□□□□ -0.84
CCDC58-201ENST00000291458 FGF22Q9HCT0 170 aa9.78□□□□□ -0.84
CCDC58-201ENST00000291458 SAE1Q9UBE0 346 aaPredicted RBP9.78□□□□□ -0.84
CCDC58-201ENST00000291458 PHTF1Q9UMS5 762 aa9.78□□□□□ -0.84
CCDC58-201ENST00000291458 GPR34Q9UPC5 381 aa9.78□□□□□ -0.84
CCDC58-201ENST00000291458 RAXQ9Y2V3 346 aa9.78□□□□□ -0.84
CCDC58-201ENST00000291458 PCDHB1Q9Y5F3 818 aa9.78□□□□□ -0.84
CCDC58-201ENST00000291458 PCDHA13Q9Y5I0 950 aa9.78□□□□□ -0.84
CCDC58-201ENST00000291458 AK5Q9Y6K8 562 aa9.78□□□□□ -0.84
CCDC58-201ENST00000291458 RP1P56715 2156 aa9.78□□□□□ -0.84
CCDC58-201ENST00000291458 TMEM202A6NGA9 273 aa9.77□□□□□ -0.85
CCDC58-201ENST00000291458 TAF4O00268 1085 aa9.77□□□□□ -0.85
CCDC58-201ENST00000291458 INPP4BO15327 924 aa9.77□□□□□ -0.85
CCDC58-201ENST00000291458 IPO7O95373 1038 aaKnown RBP9.77□□□□□ -0.85
CCDC58-201ENST00000291458 MT-CO3P00414 261 aa9.77□□□□□ -0.85
CCDC58-201ENST00000291458 C1SP09871 688 aa9.77□□□□□ -0.85
CCDC58-201ENST00000291458 CKMT1AP12532 417 aa9.77□□□□□ -0.85
CCDC58-201ENST00000291458 PECAM1P16284 738 aaPredicted RBP9.77□□□□□ -0.85
CCDC58-201ENST00000291458 CCNCP24863 283 aa9.77□□□□□ -0.85
CCDC58-201ENST00000291458 NFKBIAP25963 317 aa9.77□□□□□ -0.85
CCDC58-201ENST00000291458 HK3P52790 923 aa9.77□□□□□ -0.85
CCDC58-201ENST00000291458 KIAA1024LP59773 190 aa9.77□□□□□ -0.85
CCDC58-201ENST00000291458 PPIDQ08752 370 aaKnown RBP9.77□□□□□ -0.85
CCDC58-201ENST00000291458 IHHQ14623 411 aa9.77□□□□□ -0.85
CCDC58-201ENST00000291458 LAPTM4AQ15012 233 aa9.77□□□□□ -0.85
CCDC58-201ENST00000291458 SLC9A4Q6AI14 798 aa9.77□□□□□ -0.85
CCDC58-201ENST00000291458 PNCKQ6P2M8 343 aa9.77□□□□□ -0.85
CCDC58-201ENST00000291458 FOXR1Q6PIV2 292 aa9.77□□□□□ -0.85
CCDC58-201ENST00000291458 C19orf48Q6RUI8 117 aa9.77□□□□□ -0.85
CCDC58-201ENST00000291458 SPOCD1Q6ZMY3 1216 aa9.77□□□□□ -0.85
CCDC58-201ENST00000291458 Q6ZVL8 140 aa9.77□□□□□ -0.85
CCDC58-201ENST00000291458 MARK2Q7KZI7 788 aaKnown RBP9.77□□□□□ -0.85
CCDC58-201ENST00000291458 TAF8Q7Z7C8 310 aa9.77□□□□□ -0.85
CCDC58-201ENST00000291458 DAAM2Q86T65 1068 aa9.77□□□□□ -0.85
CCDC58-201ENST00000291458 ZC3H18Q86VM9 953 aaKnown RBP9.77□□□□□ -0.85
CCDC58-201ENST00000291458 TMPRSS12Q86WS5 348 aa9.77□□□□□ -0.85
CCDC58-201ENST00000291458 SFTPA2Q8IWL1 248 aa9.77□□□□□ -0.85
CCDC58-201ENST00000291458 TEX26Q8N6G2 289 aa9.77□□□□□ -0.85
CCDC58-201ENST00000291458 KDF1Q8NAX2 398 aaPredicted RBP9.77□□□□□ -0.85
CCDC58-201ENST00000291458 OR56A4Q8NGH8 313 aa9.77□□□□□ -0.85
CCDC58-201ENST00000291458 CCL4L1Q8NHW4 92 aa9.77□□□□□ -0.85
CCDC58-201ENST00000291458 PIH1D2Q8WWB5 315 aa9.77□□□□□ -0.85
CCDC58-201ENST00000291458 MAML1Q92585 1016 aa9.77□□□□□ -0.85
CCDC58-201ENST00000291458 KRT35Q92764 455 aa9.77□□□□□ -0.85
CCDC58-201ENST00000291458 NXPE2Q96DL1 559 aa9.77□□□□□ -0.85
CCDC58-201ENST00000291458 DTD2Q96FN9 168 aa9.77□□□□□ -0.85
CCDC58-201ENST00000291458 MRFAP1L1Q96HT8 127 aa9.77□□□□□ -0.85
CCDC58-201ENST00000291458 COQ10AQ96MF6 247 aa9.77□□□□□ -0.85
CCDC58-201ENST00000291458 RBM15Q96T37 977 aaKnown RBP eCLIP9.77□□□□□ -0.85
CCDC58-201ENST00000291458 DESI2Q9BSY9 194 aa9.77□□□□□ -0.85
CCDC58-201ENST00000291458 TDRD1Q9BXT4 1180 aaKnown RBP9.77□□□□□ -0.85
CCDC58-201ENST00000291458 ABCG4Q9H172 646 aa9.77□□□□□ -0.85
CCDC58-201ENST00000291458 CARS2Q9HA77 564 aaKnown RBP9.77□□□□□ -0.85
CCDC58-201ENST00000291458 PCDH9Q9HC56 1237 aa9.77□□□□□ -0.85
CCDC58-201ENST00000291458 HAUS2Q9NVX0 235 aa9.77□□□□□ -0.85
CCDC58-201ENST00000291458 DDX56Q9NY93 547 aaKnown RBP9.77□□□□□ -0.85
CCDC58-201ENST00000291458 UBP1Q9NZI7 540 aa9.77□□□□□ -0.85
CCDC58-201ENST00000291458 INTUQ9ULD6 942 aa9.77□□□□□ -0.85
CCDC58-201ENST00000291458 CLCA2Q9UQC9 943 aa9.77□□□□□ -0.85
CCDC58-201ENST00000291458 ASXL3Q9C0F0 2248 aa9.76□□□□□ -0.85
CCDC58-201ENST00000291458 AKAP13Q12802 2813 aa9.76□□□□□ -0.85
CCDC58-201ENST00000291458 ZFC3H1O60293 1989 aaKnown RBP9.76□□□□□ -0.85
CCDC58-201ENST00000291458 A0A0J9YYE9 177 aa9.76□□□□□ -0.85
CCDC58-201ENST00000291458 C1orf232A0A0U1RR37 186 aa9.76□□□□□ -0.85
CCDC58-201ENST00000291458 PRSS38A1L453 326 aa9.76□□□□□ -0.85
CCDC58-201ENST00000291458 CAPN8A6NHC0 703 aa9.76□□□□□ -0.85
CCDC58-201ENST00000291458 PPP1R12AO14974 1030 aaPredicted RBP9.76□□□□□ -0.85
CCDC58-201ENST00000291458 YY2O15391 372 aa9.76□□□□□ -0.85
CCDC58-201ENST00000291458 PSTPIP1O43586 416 aa9.76□□□□□ -0.85
CCDC58-201ENST00000291458 OPA1O60313 960 aa9.76□□□□□ -0.85
CCDC58-201ENST00000291458 CST8O60676 142 aa9.76□□□□□ -0.85
CCDC58-201ENST00000291458 CSO75390 466 aaKnown RBP9.76□□□□□ -0.85
CCDC58-201ENST00000291458 NDUFA10O95299 355 aa9.76□□□□□ -0.85
CCDC58-201ENST00000291458 CLDN7O95471 211 aa9.76□□□□□ -0.85
CCDC58-201ENST00000291458 TNFP01375 233 aa9.76□□□□□ -0.85
CCDC58-201ENST00000291458 TRBC1P01850 177 aa9.76□□□□□ -0.85
CCDC58-201ENST00000291458 CA4P22748 312 aa9.76□□□□□ -0.85
CCDC58-201ENST00000291458 SLC1A1P43005 524 aa9.76□□□□□ -0.85
CCDC58-201ENST00000291458 GPR1P46091 355 aa9.76□□□□□ -0.85
CCDC58-201ENST00000291458 GNPDA1P46926 289 aa9.76□□□□□ -0.85
CCDC58-201ENST00000291458 BLKP51451 505 aa9.76□□□□□ -0.85
CCDC58-201ENST00000291458 DUSP3P51452 185 aaPredicted RBP9.76□□□□□ -0.85
CCDC58-201ENST00000291458 CDK3Q00526 305 aa9.76□□□□□ -0.85
CCDC58-201ENST00000291458 PDK1Q15118 436 aa9.76□□□□□ -0.85
CCDC58-201ENST00000291458 ELOCQ15369 112 aa9.76□□□□□ -0.85
CCDC58-201ENST00000291458 CCDC181Q5TID7 509 aa9.76□□□□□ -0.85
CCDC58-201ENST00000291458 ALS2CLQ60I27 953 aa9.76□□□□□ -0.85
CCDC58-201ENST00000291458 ESRP1Q6NXG1 681 aaKnown RBP9.76□□□□□ -0.85
CCDC58-201ENST00000291458 RAD9BQ6WBX8 426 aa9.76□□□□□ -0.85
CCDC58-201ENST00000291458 KIAA1328Q86T90 577 aa9.76□□□□□ -0.85
CCDC58-201ENST00000291458 PROSER1Q86XN7 944 aa9.76□□□□□ -0.85
CCDC58-201ENST00000291458 LRRC49Q8IUZ0 686 aa9.76□□□□□ -0.85
CCDC58-201ENST00000291458 NDUFAF2Q8N183 169 aa9.76□□□□□ -0.85
CCDC58-201ENST00000291458 FSTL5Q8N475 847 aaPredicted RBP9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms