RNA–Protein interactions for RNA: ENST00000288840.9

SMAD6-201, Transcript of SMAD family member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD6, Length 3,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-201ENST00000288840 PCDHB9Q9Y5E1 797 aa15.9■□□□□ 0.14
SMAD6-201ENST00000288840 HNRNPCP07910 306 aaKnown RBP eCLIP15.9■□□□□ 0.14
SMAD6-201ENST00000288840 SLC11A2P49281 568 aa15.9■□□□□ 0.14
SMAD6-201ENST00000288840 MLLT6P55198 1093 aaPredicted RBP15.9■□□□□ 0.14
SMAD6-201ENST00000288840 STXBP5Q5T5C0 1151 aa15.9■□□□□ 0.14
SMAD6-201ENST00000288840 MFSD4BQ5TF39 518 aa15.9■□□□□ 0.14
SMAD6-201ENST00000288840 PRDM16Q9HAZ2 1276 aa15.9■□□□□ 0.14
SMAD6-201ENST00000288840 GKN1Q9NS71 199 aa15.9■□□□□ 0.14
SMAD6-201ENST00000288840 DNAJB4Q9UDY4 337 aa15.9■□□□□ 0.14
SMAD6-201ENST00000288840 A0A0D9SEW6 157 aa15.89■□□□□ 0.13
SMAD6-201ENST00000288840 CLASP2O75122 1294 aaKnown RBP15.89■□□□□ 0.13
SMAD6-201ENST00000288840 CHRNA1P02708 482 aa15.89■□□□□ 0.13
SMAD6-201ENST00000288840 CYP2C18P33260 490 aa15.89■□□□□ 0.13
SMAD6-201ENST00000288840 UPP1Q16831 310 aa15.89■□□□□ 0.13
SMAD6-201ENST00000288840 TMTC4Q5T4D3 741 aa15.89■□□□□ 0.13
SMAD6-201ENST00000288840 FAM126BQ8IXS8 530 aa15.89■□□□□ 0.13
SMAD6-201ENST00000288840 SOX17Q9H6I2 414 aaPredicted RBP15.89■□□□□ 0.13
SMAD6-201ENST00000288840 SYTL2Q9HCH5 934 aa15.89■□□□□ 0.13
SMAD6-201ENST00000288840 UBA2Q9UBT2 640 aaPredicted RBP15.89■□□□□ 0.13
SMAD6-201ENST00000288840 MYRFQ9Y2G1 1151 aa15.89■□□□□ 0.13
SMAD6-201ENST00000288840 PCDHB7Q9Y5E2 793 aa15.89■□□□□ 0.13
SMAD6-201ENST00000288840 PRRG1O14668 218 aa15.89■□□□□ 0.13
SMAD6-201ENST00000288840 GSSP48637 474 aa15.89■□□□□ 0.13
SMAD6-201ENST00000288840 ARHGEF7Q14155 803 aa15.89■□□□□ 0.13
SMAD6-201ENST00000288840 FAM124BQ9H5Z6 455 aaPredicted RBP15.89■□□□□ 0.13
SMAD6-201ENST00000288840 COL11A1P12107 1806 aaPredicted RBP15.89■□□□□ 0.13
SMAD6-201ENST00000288840 DHRS12A0PJE2 317 aa15.89■□□□□ 0.13
SMAD6-201ENST00000288840 MYO1GB0I1T2 1018 aa15.89■□□□□ 0.13
SMAD6-201ENST00000288840 NR4A1P22736 598 aa15.89■□□□□ 0.13
SMAD6-201ENST00000288840 GRIK3Q13003 919 aa15.89■□□□□ 0.13
SMAD6-201ENST00000288840 TUBB3Q13509 450 aa15.89■□□□□ 0.13
SMAD6-201ENST00000288840 ALKAL1Q6UXT8 129 aa15.89■□□□□ 0.13
SMAD6-201ENST00000288840 STAG3L4Q8TBR4 150 aa15.89■□□□□ 0.13
SMAD6-201ENST00000288840 GFM2Q969S9 779 aaKnown RBP15.89■□□□□ 0.13
SMAD6-201ENST00000288840 MS4A4AQ96JQ5 239 aa15.89■□□□□ 0.13
SMAD6-201ENST00000288840 WWOXQ9NZC7 414 aa15.89■□□□□ 0.13
SMAD6-201ENST00000288840 ZNF487B1APH4 448 aa15.88■□□□□ 0.13
SMAD6-201ENST00000288840 H3BSA7 217 aa15.88■□□□□ 0.13
SMAD6-201ENST00000288840 ZNF189O75820 626 aaPredicted RBP15.88■□□□□ 0.13
SMAD6-201ENST00000288840 GSRP00390 522 aa15.88■□□□□ 0.13
SMAD6-201ENST00000288840 ALBP02768 609 aa15.88■□□□□ 0.13
SMAD6-201ENST00000288840 COL6A2P12110 1019 aa15.88■□□□□ 0.13
SMAD6-201ENST00000288840 CDKN2DP55273 166 aa15.88■□□□□ 0.13
SMAD6-201ENST00000288840 RHOAP61586 193 aa15.88■□□□□ 0.13
SMAD6-201ENST00000288840 MSLNQ13421 630 aaPredicted RBP15.88■□□□□ 0.13
SMAD6-201ENST00000288840 HNRNPDQ14103 355 aaKnown RBP15.88■□□□□ 0.13
SMAD6-201ENST00000288840 LDLRAD1Q5T700 205 aa15.88■□□□□ 0.13
SMAD6-201ENST00000288840 GPSM1Q86YR5 675 aa15.88■□□□□ 0.13
SMAD6-201ENST00000288840 KDM1BQ8NB78 822 aa15.88■□□□□ 0.13
SMAD6-201ENST00000288840 SHROOM3Q8TF72 1996 aa15.88■□□□□ 0.13
SMAD6-201ENST00000288840 NIPSNAP2O75323 286 aa15.88■□□□□ 0.13
SMAD6-201ENST00000288840 PRKAR2AP13861 404 aaKnown RBP15.88■□□□□ 0.13
SMAD6-201ENST00000288840 YAP1P46937 504 aaKnown RBP15.88■□□□□ 0.13
SMAD6-201ENST00000288840 DIO3P55073 304 aa15.88■□□□□ 0.13
SMAD6-201ENST00000288840 CREB5Q02930 508 aa15.88■□□□□ 0.13
SMAD6-201ENST00000288840 CDH18Q13634 790 aa15.88■□□□□ 0.13
SMAD6-201ENST00000288840 GTF2H3Q13889 308 aa15.88■□□□□ 0.13
SMAD6-201ENST00000288840 VARS2Q5ST30 1063 aaKnown RBP15.88■□□□□ 0.13
SMAD6-201ENST00000288840 KIAA0930Q6ICG6 404 aaPredicted RBP15.88■□□□□ 0.13
SMAD6-201ENST00000288840 FAM45BPQ6NSW5 357 aa15.88■□□□□ 0.13
SMAD6-201ENST00000288840 CYS1Q717R9 158 aa15.88■□□□□ 0.13
SMAD6-201ENST00000288840 GPR141Q7Z602 305 aa15.88■□□□□ 0.13
SMAD6-201ENST00000288840 FAM45AQ8TCE6 357 aa15.88■□□□□ 0.13
SMAD6-201ENST00000288840 DLG3Q92796 817 aa15.88■□□□□ 0.13
SMAD6-201ENST00000288840 TMEM74Q96NL1 305 aa15.88■□□□□ 0.13
SMAD6-201ENST00000288840 ARHGAP39Q9C0H5 1083 aa15.88■□□□□ 0.13
SMAD6-201ENST00000288840 RAD54BQ9Y620 910 aa15.88■□□□□ 0.13
SMAD6-201ENST00000288840 U3KQV3 271 aa15.88■□□□□ 0.13
SMAD6-201ENST00000288840 DNAH12Q6ZR08 3092 aa15.88■□□□□ 0.13
SMAD6-201ENST00000288840 TBKBP1A7MCY6 615 aa15.88■□□□□ 0.13
SMAD6-201ENST00000288840 PTGES3LE9PB15 166 aa15.88■□□□□ 0.13
SMAD6-201ENST00000288840 CDC7O00311 574 aa15.88■□□□□ 0.13
SMAD6-201ENST00000288840 MAP4P27816 1152 aaKnown RBP15.88■□□□□ 0.13
SMAD6-201ENST00000288840 GATMP50440 423 aa15.88■□□□□ 0.13
SMAD6-201ENST00000288840 MCCD1P59942 119 aaPredicted RBP15.88■□□□□ 0.13
SMAD6-201ENST00000288840 USP46P62068 366 aa15.88■□□□□ 0.13
SMAD6-201ENST00000288840 RABL3Q5HYI8 236 aa15.88■□□□□ 0.13
SMAD6-201ENST00000288840 CHST15Q7LFX5 561 aaPredicted RBP15.88■□□□□ 0.13
SMAD6-201ENST00000288840 ZNF598Q86UK7 904 aaKnown RBP15.88■□□□□ 0.13
SMAD6-201ENST00000288840 RAET1EQ8TD07 263 aa15.88■□□□□ 0.13
SMAD6-201ENST00000288840 IGSF8Q969P0 613 aa15.88■□□□□ 0.13
SMAD6-201ENST00000288840 LINGO1Q96FE5 620 aa15.88■□□□□ 0.13
SMAD6-201ENST00000288840 PPP1R2P1Q96PQ5 205 aa15.88■□□□□ 0.13
SMAD6-201ENST00000288840 CCDC28BQ9BUN5 200 aa15.88■□□□□ 0.13
SMAD6-201ENST00000288840 UNC93B1Q9H1C4 597 aa15.88■□□□□ 0.13
SMAD6-201ENST00000288840 GALPQ9UBC7 116 aa15.88■□□□□ 0.13
SMAD6-201ENST00000288840 CRLS1Q9UJA2 301 aa15.88■□□□□ 0.13
SMAD6-201ENST00000288840 GON4LQ3T8J9 2241 aa15.87■□□□□ 0.13
SMAD6-201ENST00000288840 GABRDO14764 452 aa15.87■□□□□ 0.13
SMAD6-201ENST00000288840 SPATA31D3P0C874 917 aa15.87■□□□□ 0.13
SMAD6-201ENST00000288840 HSPA1AP0DMV8 641 aaKnown RBP15.87■□□□□ 0.13
SMAD6-201ENST00000288840 HSPA1BP0DMV9 641 aaKnown RBP15.87■□□□□ 0.13
SMAD6-201ENST00000288840 AGTR2P50052 363 aa15.87■□□□□ 0.13
SMAD6-201ENST00000288840 C16orf72Q14CZ0 275 aa15.87■□□□□ 0.13
SMAD6-201ENST00000288840 FBXL19Q6PCT2 694 aa15.87■□□□□ 0.13
SMAD6-201ENST00000288840 C16orf87Q6PH81 154 aa15.87■□□□□ 0.13
SMAD6-201ENST00000288840 PRSS55Q6UWB4 352 aaPredicted RBP15.87■□□□□ 0.13
SMAD6-201ENST00000288840 SPATA31D4Q6ZUB0 917 aa15.87■□□□□ 0.13
SMAD6-201ENST00000288840 SPPL2BQ8TCT7 592 aa15.87■□□□□ 0.13
SMAD6-201ENST00000288840 KLHL32Q96NJ5 620 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms