RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 SLC18A1P54219 525 aa12.56□□□□□ -0.4
SLC6A1-201ENST00000287766 NFE2Q16621 373 aaPredicted RBP12.56□□□□□ -0.4
SLC6A1-201ENST00000287766 PGS1Q32NB8 556 aa12.56□□□□□ -0.4
SLC6A1-201ENST00000287766 GPR158Q5T848 1215 aa12.56□□□□□ -0.4
SLC6A1-201ENST00000287766 PIWIL4Q7Z3Z4 852 aaKnown RBP12.56□□□□□ -0.4
SLC6A1-201ENST00000287766 TOP6BLQ8N6T0 577 aa12.56□□□□□ -0.4
SLC6A1-201ENST00000287766 RP9Q8TA86 221 aaKnown RBP12.56□□□□□ -0.4
SLC6A1-201ENST00000287766 CCDC28BQ9BUN5 200 aa12.56□□□□□ -0.4
SLC6A1-201ENST00000287766 MRPL39Q9NYK5 338 aaKnown RBP12.56□□□□□ -0.4
SLC6A1-201ENST00000287766 VPS28Q9UK41 221 aa12.56□□□□□ -0.4
SLC6A1-201ENST00000287766 FZD9O00144 591 aa12.56□□□□□ -0.4
SLC6A1-201ENST00000287766 TMCC2O75069 709 aa12.56□□□□□ -0.4
SLC6A1-201ENST00000287766 SNRPB2P08579 225 aaKnown RBP12.56□□□□□ -0.4
SLC6A1-201ENST00000287766 T-ENOLP0DO92 83 aa12.56□□□□□ -0.4
SLC6A1-201ENST00000287766 HGFP14210 728 aa12.56□□□□□ -0.4
SLC6A1-201ENST00000287766 YWHAQP27348 245 aa12.56□□□□□ -0.4
SLC6A1-201ENST00000287766 GCAP28676 217 aa12.56□□□□□ -0.4
SLC6A1-201ENST00000287766 ACTR3P61158 418 aa12.56□□□□□ -0.4
SLC6A1-201ENST00000287766 CDH18Q13634 790 aa12.56□□□□□ -0.4
SLC6A1-201ENST00000287766 FRG1Q14331 258 aaKnown RBP12.56□□□□□ -0.4
SLC6A1-201ENST00000287766 AKIRIN2Q53H80 203 aa12.56□□□□□ -0.4
SLC6A1-201ENST00000287766 ANKS6Q68DC2 871 aa12.56□□□□□ -0.4
SLC6A1-201ENST00000287766 CLEC20AQ6ZU45 233 aa12.56□□□□□ -0.4
SLC6A1-201ENST00000287766 METTL6Q8TCB7 284 aa12.56□□□□□ -0.4
SLC6A1-201ENST00000287766 ESAMQ96AP7 390 aa12.56□□□□□ -0.4
SLC6A1-201ENST00000287766 OSBPL6Q9BZF3 934 aa12.56□□□□□ -0.4
SLC6A1-201ENST00000287766 SERHL2Q9H4I8 314 aa12.56□□□□□ -0.4
SLC6A1-201ENST00000287766 SERHLQ9NQF3 203 aa12.56□□□□□ -0.4
SLC6A1-201ENST00000287766 ZNF624Q9P2J8 865 aaPredicted RBP12.56□□□□□ -0.4
SLC6A1-201ENST00000287766 TMCC3Q9ULS5 477 aa12.56□□□□□ -0.4
SLC6A1-201ENST00000287766 FADS3Q9Y5Q0 445 aa12.56□□□□□ -0.4
SLC6A1-201ENST00000287766 FAM149AA5PLN7 773 aa12.56□□□□□ -0.4
SLC6A1-201ENST00000287766 EFCAB14O75071 495 aa12.56□□□□□ -0.4
SLC6A1-201ENST00000287766 TKTP29401 623 aaKnown RBP12.56□□□□□ -0.4
SLC6A1-201ENST00000287766 DAOAP59103 153 aa12.56□□□□□ -0.4
SLC6A1-201ENST00000287766 CLDN10P78369 228 aa12.56□□□□□ -0.4
SLC6A1-201ENST00000287766 MRPS6P82932 125 aaKnown RBP12.56□□□□□ -0.4
SLC6A1-201ENST00000287766 RNF219Q5W0B1 726 aaPredicted RBP12.56□□□□□ -0.4
SLC6A1-201ENST00000287766 DENND5AQ6IQ26 1287 aa12.56□□□□□ -0.4
SLC6A1-201ENST00000287766 GLT6D1Q7Z4J2 308 aa12.56□□□□□ -0.4
SLC6A1-201ENST00000287766 OSTM1Q86WC4 334 aa12.56□□□□□ -0.4
SLC6A1-201ENST00000287766 PNPLA1Q8N8W4 532 aa12.56□□□□□ -0.4
SLC6A1-201ENST00000287766 MCFD2Q8NI22 146 aa12.56□□□□□ -0.4
SLC6A1-201ENST00000287766 HNRNPABQ99729 332 aaKnown RBP12.56□□□□□ -0.4
SLC6A1-201ENST00000287766 FAM72CH0Y354 149 aa12.56□□□□□ -0.4
SLC6A1-201ENST00000287766 AKR1A1P14550 325 aa12.56□□□□□ -0.4
SLC6A1-201ENST00000287766 SLC2A4P14672 509 aa12.56□□□□□ -0.4
SLC6A1-201ENST00000287766 ALDH6A1Q02252 535 aaKnown RBP12.56□□□□□ -0.4
SLC6A1-201ENST00000287766 DSC2Q02487 901 aa12.56□□□□□ -0.4
SLC6A1-201ENST00000287766 MADCAM1Q13477 382 aa12.56□□□□□ -0.4
SLC6A1-201ENST00000287766 ZFP69Q49AA0 526 aa12.56□□□□□ -0.4
SLC6A1-201ENST00000287766 FAM72AQ5TYM5 149 aa12.56□□□□□ -0.4
SLC6A1-201ENST00000287766 SLC9A4Q6AI14 798 aa12.56□□□□□ -0.4
SLC6A1-201ENST00000287766 FAM72DQ6L9T8 149 aa12.56□□□□□ -0.4
SLC6A1-201ENST00000287766 MILR1Q7Z6M3 343 aa12.56□□□□□ -0.4
SLC6A1-201ENST00000287766 CUZD1Q86UP6 607 aa12.56□□□□□ -0.4
SLC6A1-201ENST00000287766 FAM72BQ86X60 149 aa12.56□□□□□ -0.4
SLC6A1-201ENST00000287766 UTP4Q969X6 686 aaKnown RBP12.56□□□□□ -0.4
SLC6A1-201ENST00000287766 MRPL57Q9BQC6 102 aaKnown RBP12.56□□□□□ -0.4
SLC6A1-201ENST00000287766 PIDD1Q9HB75 910 aa12.56□□□□□ -0.4
SLC6A1-201ENST00000287766 NMRK2Q9NPI5 230 aa12.56□□□□□ -0.4
SLC6A1-201ENST00000287766 TRPV5Q9NQA5 729 aa12.56□□□□□ -0.4
SLC6A1-201ENST00000287766 TAS2R13Q9NYV9 303 aa12.56□□□□□ -0.4
SLC6A1-201ENST00000287766 MRPS7Q9Y2R9 242 aaKnown RBP12.56□□□□□ -0.4
SLC6A1-201ENST00000287766 VWA7Q9Y334 891 aa12.56□□□□□ -0.4
SLC6A1-201ENST00000287766 PCDHB5Q9Y5E4 795 aa12.56□□□□□ -0.4
SLC6A1-201ENST00000287766 SRCAPQ6ZRS2 3230 aa12.55□□□□□ -0.4
SLC6A1-201ENST00000287766 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.55□□□□□ -0.4
SLC6A1-201ENST00000287766 A0A1W2PQH9 124 aa12.55□□□□□ -0.4
SLC6A1-201ENST00000287766 OR51F1A6NGY5 319 aa12.55□□□□□ -0.4
SLC6A1-201ENST00000287766 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.55□□□□□ -0.4
SLC6A1-201ENST00000287766 TOR1BO14657 336 aa12.55□□□□□ -0.4
SLC6A1-201ENST00000287766 BEST1O76090 585 aa12.55□□□□□ -0.4
SLC6A1-201ENST00000287766 CYP3A5P20815 502 aa12.55□□□□□ -0.4
SLC6A1-201ENST00000287766 ZNF276Q8N554 614 aa12.55□□□□□ -0.4
SLC6A1-201ENST00000287766 WDR36Q8NI36 951 aaKnown RBP12.55□□□□□ -0.4
SLC6A1-201ENST00000287766 OXCT2Q9BYC2 517 aaPredicted RBP12.55□□□□□ -0.4
SLC6A1-201ENST00000287766 PCDHAC1Q9H158 963 aa12.55□□□□□ -0.4
SLC6A1-201ENST00000287766 GBA3Q9H227 469 aa12.55□□□□□ -0.4
SLC6A1-201ENST00000287766 TOR3AQ9H497 397 aa12.55□□□□□ -0.4
SLC6A1-201ENST00000287766 GIN1Q9NXP7 522 aa12.55□□□□□ -0.4
SLC6A1-201ENST00000287766 POLG2Q9UHN1 485 aa12.55□□□□□ -0.4
SLC6A1-201ENST00000287766 TIMM22Q9Y584 194 aa12.55□□□□□ -0.4
SLC6A1-201ENST00000287766 PCDHB12Q9Y5F1 795 aa12.55□□□□□ -0.4
SLC6A1-201ENST00000287766 TNRC6CQ9HCJ0 1690 aaKnown RBP12.55□□□□□ -0.4
SLC6A1-201ENST00000287766 KLHL33A6NCF5 533 aa12.55□□□□□ -0.4
SLC6A1-201ENST00000287766 CCDC182A6NF36 153 aa12.55□□□□□ -0.4
SLC6A1-201ENST00000287766 TMEM114B3SHH9 223 aa12.55□□□□□ -0.4
SLC6A1-201ENST00000287766 BTN3A3O00478 584 aa12.55□□□□□ -0.4
SLC6A1-201ENST00000287766 TRIM38O00635 465 aa12.55□□□□□ -0.4
SLC6A1-201ENST00000287766 NRP2O60462 931 aa12.55□□□□□ -0.4
SLC6A1-201ENST00000287766 CRTAMO95727 393 aa12.55□□□□□ -0.4
SLC6A1-201ENST00000287766 OAS1P00973 400 aaKnown RBP12.55□□□□□ -0.4
SLC6A1-201ENST00000287766 IL6P05231 212 aa12.55□□□□□ -0.4
SLC6A1-201ENST00000287766 ATP5BP06576 529 aaKnown RBP12.55□□□□□ -0.4
SLC6A1-201ENST00000287766 ABL2P42684 1182 aa12.55□□□□□ -0.4
SLC6A1-201ENST00000287766 COX10Q12887 443 aa12.55□□□□□ -0.4
SLC6A1-201ENST00000287766 ITGA7Q13683 1181 aa12.55□□□□□ -0.4
SLC6A1-201ENST00000287766 ARHGEF7Q14155 803 aa12.55□□□□□ -0.4
SLC6A1-201ENST00000287766 ASRGL1Q7L266 308 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms