RNA–Protein interactions for RNA: ENST00000284049.7

CHD1-201, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1, Length 6,457 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-201ENST00000284049 FAM81AQ8TBF8 368 aa2.78□□□□□ -1.96
CHD1-201ENST00000284049 SEMA3GQ9NS98 782 aa2.78□□□□□ -1.96
CHD1-201ENST00000284049 TMOD3Q9NYL9 352 aa2.78□□□□□ -1.96
CHD1-201ENST00000284049 TFCP2L1Q9NZI6 479 aa2.78□□□□□ -1.96
CHD1-201ENST00000284049 HACD3Q9P035 362 aa2.78□□□□□ -1.96
CHD1-201ENST00000284049 NDUFA13Q9P0J0 144 aa2.78□□□□□ -1.96
CHD1-201ENST00000284049 NR2E1Q9Y466 385 aa2.78□□□□□ -1.96
CHD1-201ENST00000284049 MBD3L5A6NJ08 208 aaPredicted RBP2.78□□□□□ -1.96
CHD1-201ENST00000284049 MSI1O43347 362 aaKnown RBP2.78□□□□□ -1.96
CHD1-201ENST00000284049 RTN2O75298 545 aa2.78□□□□□ -1.96
CHD1-201ENST00000284049 RPS6KA5O75582 802 aa2.78□□□□□ -1.96
CHD1-201ENST00000284049 IDH1O75874 414 aaKnown RBP2.78□□□□□ -1.96
CHD1-201ENST00000284049 GPANK1O95872 356 aa2.78□□□□□ -1.96
CHD1-201ENST00000284049 ALDOCP09972 364 aaKnown RBP2.78□□□□□ -1.96
CHD1-201ENST00000284049 ETS1P14921 441 aa2.78□□□□□ -1.96
CHD1-201ENST00000284049 ZNF18P17022 549 aa2.78□□□□□ -1.96
CHD1-201ENST00000284049 ITIH1P19827 911 aa2.78□□□□□ -1.96
CHD1-201ENST00000284049 MECOMQ03112 1051 aa2.78□□□□□ -1.96
CHD1-201ENST00000284049 CCDC173Q0VFZ6 552 aa2.78□□□□□ -1.96
CHD1-201ENST00000284049 CLCA4Q14CN2 919 aa2.78□□□□□ -1.96
CHD1-201ENST00000284049 PLEKHO1Q53GL0 409 aaPredicted RBP2.78□□□□□ -1.96
CHD1-201ENST00000284049 ZNF628Q5EBL2 1059 aa2.78□□□□□ -1.96
CHD1-201ENST00000284049 AGBL4Q5VU57 503 aa2.78□□□□□ -1.96
CHD1-201ENST00000284049 CCDC144NLQ6NUI1 221 aa2.78□□□□□ -1.96
CHD1-201ENST00000284049 CTR9Q6PD62 1173 aa2.78□□□□□ -1.96
CHD1-201ENST00000284049 RNF144BQ7Z419 303 aa2.78□□□□□ -1.96
CHD1-201ENST00000284049 TMEM200AQ86VY9 491 aa2.78□□□□□ -1.96
CHD1-201ENST00000284049 KLBQ86Z14 1044 aa2.78□□□□□ -1.96
CHD1-201ENST00000284049 TP53INP2Q8IXH6 220 aa2.78□□□□□ -1.96
CHD1-201ENST00000284049 TC2NQ8N9U0 490 aa2.78□□□□□ -1.96
CHD1-201ENST00000284049 IL17RCQ8NAC3 791 aa2.78□□□□□ -1.96
CHD1-201ENST00000284049 GJC3Q8NFK1 279 aa2.78□□□□□ -1.96
CHD1-201ENST00000284049 ZNF419Q96HQ0 510 aaPredicted RBP2.78□□□□□ -1.96
CHD1-201ENST00000284049 GSDMAQ96QA5 445 aa2.78□□□□□ -1.96
CHD1-201ENST00000284049 PNKPQ96T60 521 aa2.78□□□□□ -1.96
CHD1-201ENST00000284049 MTPAPQ9NVV4 582 aaKnown RBP eCLIP2.78□□□□□ -1.96
CHD1-201ENST00000284049 COPG2Q9UBF2 871 aa2.78□□□□□ -1.96
CHD1-201ENST00000284049 SPASTQ9UBP0 616 aa2.78□□□□□ -1.96
CHD1-201ENST00000284049 PIN4Q9Y237 131 aaKnown RBP2.78□□□□□ -1.96
CHD1-201ENST00000284049 DISP2A7MBM2 1401 aa2.77□□□□□ -1.97
CHD1-201ENST00000284049 PAPPAQ13219 1627 aa2.77□□□□□ -1.97
CHD1-201ENST00000284049 CCDC151A5D8V7 595 aa2.77□□□□□ -1.97
CHD1-201ENST00000284049 HTR3EA5X5Y0 456 aa2.77□□□□□ -1.97
CHD1-201ENST00000284049 TBKBP1A7MCY6 615 aa2.77□□□□□ -1.97
CHD1-201ENST00000284049 PRAMEF11O60813 436 aa2.77□□□□□ -1.97
CHD1-201ENST00000284049 ZC3H11AO75152 810 aaKnown RBP eCLIP2.77□□□□□ -1.972e-6■■■■□ 20.5
CHD1-201ENST00000284049 HSPA8P11142 646 aaKnown RBP2.77□□□□□ -1.97
CHD1-201ENST00000284049 YWHAQP27348 245 aa2.77□□□□□ -1.97
CHD1-201ENST00000284049 ADORA2AP29274 412 aa2.77□□□□□ -1.97
CHD1-201ENST00000284049 ADMP35318 185 aa2.77□□□□□ -1.97
CHD1-201ENST00000284049 CYP2J2P51589 502 aa2.77□□□□□ -1.97
CHD1-201ENST00000284049 ZNF134P52741 427 aa2.77□□□□□ -1.97
CHD1-201ENST00000284049 PMS2P54278 862 aa2.77□□□□□ -1.97
CHD1-201ENST00000284049 TMPRSS3P57727 454 aa2.77□□□□□ -1.97
CHD1-201ENST00000284049 RAPSNQ13702 412 aa2.77□□□□□ -1.97
CHD1-201ENST00000284049 ACKR1Q16570 336 aa2.77□□□□□ -1.97
CHD1-201ENST00000284049 ERCC6LQ2NKX8 1250 aa2.77□□□□□ -1.97
CHD1-201ENST00000284049 CD300EQ496F6 205 aaPredicted RBP2.77□□□□□ -1.97
CHD1-201ENST00000284049 TDRD12Q587J7 1177 aaKnown RBP2.77□□□□□ -1.97
CHD1-201ENST00000284049 SPDYAQ5MJ70 313 aa2.77□□□□□ -1.97
CHD1-201ENST00000284049 ZNF362Q5T0B9 420 aaPredicted RBP2.77□□□□□ -1.97
CHD1-201ENST00000284049 DDX59Q5T1V6 619 aaKnown RBP eCLIP2.77□□□□□ -1.97
CHD1-201ENST00000284049 TEDDM1Q5T9Z0 273 aa2.77□□□□□ -1.97
CHD1-201ENST00000284049 TAF2Q6P1X5 1199 aa2.77□□□□□ -1.97
CHD1-201ENST00000284049 SUSD1Q6UWL2 747 aa2.77□□□□□ -1.97
CHD1-201ENST00000284049 GLDNQ6ZMI3 551 aaPredicted RBP2.77□□□□□ -1.97
CHD1-201ENST00000284049 MAML2Q8IZL2 1156 aaPredicted RBP2.77□□□□□ -1.97
CHD1-201ENST00000284049 ACDQ96AP0 544 aa2.77□□□□□ -1.97
CHD1-201ENST00000284049 LENG1Q96BZ8 264 aaPredicted RBP2.77□□□□□ -1.97
CHD1-201ENST00000284049 PGAM5Q96HS1 289 aa2.77□□□□□ -1.97
CHD1-201ENST00000284049 CRNKL1Q9BZJ0 848 aaKnown RBP2.77□□□□□ -1.97
CHD1-201ENST00000284049 C7orf69Q9H7B7 122 aa2.77□□□□□ -1.97
CHD1-201ENST00000284049 SORCS3Q9UPU3 1222 aa2.77□□□□□ -1.97
CHD1-201ENST00000284049 RCE1Q9Y256 329 aa2.77□□□□□ -1.97
CHD1-201ENST00000284049 PAM16Q9Y3D7 125 aa2.77□□□□□ -1.97
CHD1-201ENST00000284049 PARD3Q8TEW0 1356 aa2.77□□□□□ -1.97
CHD1-201ENST00000284049 KIF20BQ96Q89 1820 aa2.77□□□□□ -1.97
CHD1-201ENST00000284049 GCATO75600 419 aa2.77□□□□□ -1.97
CHD1-201ENST00000284049 PGLSO95336 258 aa2.77□□□□□ -1.97
CHD1-201ENST00000284049 DBHP09172 617 aa2.77□□□□□ -1.97
CHD1-201ENST00000284049 SFTPCP11686 197 aa2.77□□□□□ -1.97
CHD1-201ENST00000284049 NDUFB7P17568 137 aa2.77□□□□□ -1.97
CHD1-201ENST00000284049 CAMLGP49069 296 aa2.77□□□□□ -1.97
CHD1-201ENST00000284049 SMCPP49901 116 aaPredicted RBP2.77□□□□□ -1.97
CHD1-201ENST00000284049 OXCT1P55809 520 aa2.77□□□□□ -1.97
CHD1-201ENST00000284049 CRHR2Q13324 411 aa2.77□□□□□ -1.97
CHD1-201ENST00000284049 SLC14A1Q13336 389 aa2.77□□□□□ -1.97
CHD1-201ENST00000284049 SMAD4Q13485 552 aaKnown RBP2.77□□□□□ -1.97
CHD1-201ENST00000284049 MXD4Q14582 209 aaPredicted RBP2.77□□□□□ -1.97
CHD1-201ENST00000284049 UBAP2Q5T6F2 1119 aaKnown RBP2.77□□□□□ -1.97
CHD1-201ENST00000284049 OR6B2Q6IFH4 312 aa2.77□□□□□ -1.97
CHD1-201ENST00000284049 PLBD1Q6P4A8 553 aa2.77□□□□□ -1.97
CHD1-201ENST00000284049 LIPIQ6XZB0 460 aa2.77□□□□□ -1.97
CHD1-201ENST00000284049 KYQ8NBH2 561 aa2.77□□□□□ -1.97
CHD1-201ENST00000284049 CNNM3Q8NE01 707 aa2.77□□□□□ -1.97
CHD1-201ENST00000284049 OR56B2PQ8NGI1 322 aa2.77□□□□□ -1.97
CHD1-201ENST00000284049 ATOH1Q92858 354 aaPredicted RBP2.77□□□□□ -1.97
CHD1-201ENST00000284049 IFT74Q96LB3 600 aa2.77□□□□□ -1.97
CHD1-201ENST00000284049 GCOM2Q9BZD3 368 aaPredicted RBP2.77□□□□□ -1.97
CHD1-201ENST00000284049 XRN2Q9H0D6 950 aaKnown RBP eCLIP2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms