RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 CCL26Q9Y258 94 aa9.58□□□□□ -0.88
TRIM55-201ENST00000276573 KIAA0100Q14667 2235 aaKnown RBP9.58□□□□□ -0.88
TRIM55-201ENST00000276573 CXorf51AA0A1B0GTR3 108 aa9.57□□□□□ -0.88
TRIM55-201ENST00000276573 NEMP2A6NFY4 417 aa9.57□□□□□ -0.88
TRIM55-201ENST00000276573 A8MUI8 341 aa9.57□□□□□ -0.88
TRIM55-201ENST00000276573 PRR5-ARHGAP8B1AHC4 643 aa9.57□□□□□ -0.88
TRIM55-201ENST00000276573 SLCO1B7G3V0H7 640 aa9.57□□□□□ -0.88
TRIM55-201ENST00000276573 H7C0S8 307 aa9.57□□□□□ -0.88
TRIM55-201ENST00000276573 HDAC3O15379 428 aa9.57□□□□□ -0.88
TRIM55-201ENST00000276573 GYG2O15488 501 aa9.57□□□□□ -0.88
TRIM55-201ENST00000276573 GRID2O43424 1007 aa9.57□□□□□ -0.88
TRIM55-201ENST00000276573 ZNF821O75541 412 aaPredicted RBP9.57□□□□□ -0.88
TRIM55-201ENST00000276573 PRAMEF12O95522 483 aa9.57□□□□□ -0.88
TRIM55-201ENST00000276573 ENO1P06733 434 aaKnown RBP9.57□□□□□ -0.88
TRIM55-201ENST00000276573 CTPS1P17812 591 aa9.57□□□□□ -0.88
TRIM55-201ENST00000276573 AOC1P19801 751 aa9.57□□□□□ -0.88
TRIM55-201ENST00000276573 KCNA5P22460 613 aa9.57□□□□□ -0.88
TRIM55-201ENST00000276573 FMO4P31512 558 aa9.57□□□□□ -0.88
TRIM55-201ENST00000276573 MC4RP32245 332 aa9.57□□□□□ -0.88
TRIM55-201ENST00000276573 SERPINB5P36952 375 aa9.57□□□□□ -0.88
TRIM55-201ENST00000276573 CDKN1CP49918 316 aaPredicted RBP9.57□□□□□ -0.88
TRIM55-201ENST00000276573 ARHGAP8P85298 464 aa9.57□□□□□ -0.88
TRIM55-201ENST00000276573 BCL2L1Q07817 233 aa9.57□□□□□ -0.88
TRIM55-201ENST00000276573 PEX6Q13608 980 aa9.57□□□□□ -0.88
TRIM55-201ENST00000276573 SLC9B1Q4ZJI4 515 aa9.57□□□□□ -0.88
TRIM55-201ENST00000276573 SETMARQ53H47 684 aaPredicted RBP9.57□□□□□ -0.88
TRIM55-201ENST00000276573 DGKKQ5KSL6 1271 aa9.57□□□□□ -0.88
TRIM55-201ENST00000276573 METTL21CQ5VZV1 264 aa9.57□□□□□ -0.88
TRIM55-201ENST00000276573 PIWIL4Q7Z3Z4 852 aaKnown RBP9.57□□□□□ -0.88
TRIM55-201ENST00000276573 TMEM25Q86YD3 366 aa9.57□□□□□ -0.88
TRIM55-201ENST00000276573 LPGAT1Q92604 370 aa9.57□□□□□ -0.88
TRIM55-201ENST00000276573 MIPEPQ99797 713 aa9.57□□□□□ -0.88
TRIM55-201ENST00000276573 CADM1Q9BY67 442 aaKnown RBP9.57□□□□□ -0.88
TRIM55-201ENST00000276573 MAN1C1Q9NR34 630 aa9.57□□□□□ -0.88
TRIM55-201ENST00000276573 POLR3BQ9NW08 1133 aaPredicted RBP9.57□□□□□ -0.88
TRIM55-201ENST00000276573 VTI1BQ9UEU0 232 aa9.57□□□□□ -0.88
TRIM55-201ENST00000276573 BAIAP2L1Q9UHR4 511 aa9.57□□□□□ -0.88
TRIM55-201ENST00000276573 TAGLN3Q9UI15 199 aa9.57□□□□□ -0.88
TRIM55-201ENST00000276573 RWDD3Q9Y3V2 267 aa9.57□□□□□ -0.88
TRIM55-201ENST00000276573 MTF2Q9Y483 593 aaPredicted RBP9.57□□□□□ -0.88
TRIM55-201ENST00000276573 A0A0U1RQS6 177 aa9.57□□□□□ -0.88
TRIM55-201ENST00000276573 UBA6A0AVT1 1052 aaPredicted RBP9.57□□□□□ -0.88
TRIM55-201ENST00000276573 LINC01553A4QN01 128 aa9.57□□□□□ -0.88
TRIM55-201ENST00000276573 SOBPA7XYQ1 873 aa9.57□□□□□ -0.88
TRIM55-201ENST00000276573 A8MT66 165 aa9.57□□□□□ -0.88
TRIM55-201ENST00000276573 B2RBV5 119 aa9.57□□□□□ -0.88
TRIM55-201ENST00000276573 F8W8V4 182 aa9.57□□□□□ -0.88
TRIM55-201ENST00000276573 HTRA2O43464 458 aaPredicted RBP9.57□□□□□ -0.88
TRIM55-201ENST00000276573 SRP72O76094 671 aaKnown RBP9.57□□□□□ -0.88
TRIM55-201ENST00000276573 IPO13O94829 963 aaKnown RBP9.57□□□□□ -0.88
TRIM55-201ENST00000276573 SNUPNO95149 360 aaKnown RBP9.57□□□□□ -0.88
TRIM55-201ENST00000276573 RHOP08100 348 aa9.57□□□□□ -0.88
TRIM55-201ENST00000276573 CD1DP15813 335 aa9.57□□□□□ -0.88
TRIM55-201ENST00000276573 MAPK8P45983 427 aa9.57□□□□□ -0.88
TRIM55-201ENST00000276573 RPL26P61254 145 aaKnown RBP9.57□□□□□ -0.88
TRIM55-201ENST00000276573 XIAPP98170 497 aa9.57□□□□□ -0.88
TRIM55-201ENST00000276573 CAMK1Q14012 370 aa9.57□□□□□ -0.88
TRIM55-201ENST00000276573 UBAP2LQ14157 1087 aaKnown RBP9.57□□□□□ -0.88
TRIM55-201ENST00000276573 ARHGAP15Q53QZ3 475 aa9.57□□□□□ -0.88
TRIM55-201ENST00000276573 PITRM1Q5JRX3 1037 aa9.57□□□□□ -0.88
TRIM55-201ENST00000276573 PSAPL1Q6NUJ1 521 aa9.57□□□□□ -0.88
TRIM55-201ENST00000276573 SLC22A9Q8IVM8 553 aa9.57□□□□□ -0.88
TRIM55-201ENST00000276573 PIANPQ8IYJ0 282 aa9.57□□□□□ -0.88
TRIM55-201ENST00000276573 RIN3Q8TB24 985 aa9.57□□□□□ -0.88
TRIM55-201ENST00000276573 AGR3Q8TD06 166 aa9.57□□□□□ -0.88
TRIM55-201ENST00000276573 EID2BQ96D98 161 aa9.57□□□□□ -0.88
TRIM55-201ENST00000276573 MYO19Q96H55 970 aa9.57□□□□□ -0.88
TRIM55-201ENST00000276573 GPR63Q9BZJ6 419 aa9.57□□□□□ -0.88
TRIM55-201ENST00000276573 ALG9Q9H6U8 611 aa9.57□□□□□ -0.88
TRIM55-201ENST00000276573 SYTL2Q9HCH5 934 aa9.57□□□□□ -0.88
TRIM55-201ENST00000276573 TDP1Q9NUW8 608 aa9.57□□□□□ -0.88
TRIM55-201ENST00000276573 NCKIPSDQ9NZQ3 722 aa9.57□□□□□ -0.88
TRIM55-201ENST00000276573 RPL26L1Q9UNX3 145 aaKnown RBP9.57□□□□□ -0.88
TRIM55-201ENST00000276573 VPS9D1Q9Y2B5 631 aa9.57□□□□□ -0.88
TRIM55-201ENST00000276573 PKP3Q9Y446 797 aa9.57□□□□□ -0.88
TRIM55-201ENST00000276573 ZNF711Q9Y462 761 aa9.57□□□□□ -0.88
TRIM55-201ENST00000276573 ANKRD36A6QL64 1941 aa9.57□□□□□ -0.88
TRIM55-201ENST00000276573 MTCL1Q9Y4B5 1905 aaKnown RBP9.57□□□□□ -0.88
TRIM55-201ENST00000276573 SPECC1L-ADORA2AF8WAN1 911 aa9.56□□□□□ -0.88
TRIM55-201ENST00000276573 PFDN6O15212 129 aa9.56□□□□□ -0.88
TRIM55-201ENST00000276573 GRM6O15303 877 aa9.56□□□□□ -0.88
TRIM55-201ENST00000276573 ZBTB14O43829 449 aa9.56□□□□□ -0.88
TRIM55-201ENST00000276573 CLASP2O75122 1294 aaKnown RBP9.56□□□□□ -0.88
TRIM55-201ENST00000276573 RHOBTB1O94844 696 aa9.56□□□□□ -0.88
TRIM55-201ENST00000276573 PENKP01210 267 aaPredicted RBP9.56□□□□□ -0.88
TRIM55-201ENST00000276573 HNRNPA1P09651 372 aaKnown RBP eCLIP9.56□□□□□ -0.88
TRIM55-201ENST00000276573 ALPIP09923 528 aa9.56□□□□□ -0.88
TRIM55-201ENST00000276573 SRCP12931 536 aa9.56□□□□□ -0.88
TRIM55-201ENST00000276573 EPCAMP16422 314 aa9.56□□□□□ -0.88
TRIM55-201ENST00000276573 IMPDH1P20839 514 aa9.56□□□□□ -0.88
TRIM55-201ENST00000276573 HLA-FP30511 346 aa9.56□□□□□ -0.88
TRIM55-201ENST00000276573 HOXA9P31269 272 aa9.56□□□□□ -0.88
TRIM55-201ENST00000276573 GKP32189 559 aa9.56□□□□□ -0.88
TRIM55-201ENST00000276573 IRS1P35568 1242 aa9.56□□□□□ -0.88
TRIM55-201ENST00000276573 HMGCLP35914 325 aa9.56□□□□□ -0.88
TRIM55-201ENST00000276573 CTSOP43234 321 aaPredicted RBP9.56□□□□□ -0.88
TRIM55-201ENST00000276573 TTPAP49638 278 aa9.56□□□□□ -0.88
TRIM55-201ENST00000276573 PDAP1Q13442 181 aaKnown RBP9.56□□□□□ -0.88
TRIM55-201ENST00000276573 PTPRNQ16849 979 aa9.56□□□□□ -0.88
TRIM55-201ENST00000276573 ZRANB3Q5FWF4 1079 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms