RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 HDHD5Q9BXW7 423 aa9.22□□□□□ -0.93
PDGFC-201ENST00000274071 PRRG3Q9BZD7 231 aa9.22□□□□□ -0.93
PDGFC-201ENST00000274071 ASPSCR1Q9BZE9 553 aa9.22□□□□□ -0.93
PDGFC-201ENST00000274071 ZC3H12CQ9C0D7 883 aaKnown RBP9.22□□□□□ -0.93
PDGFC-201ENST00000274071 PITHD1Q9GZP4 211 aaPredicted RBP9.22□□□□□ -0.93
PDGFC-201ENST00000274071 INTS7Q9NVH2 962 aaKnown RBP9.22□□□□□ -0.93
PDGFC-201ENST00000274071 TMLHEQ9NVH6 421 aa9.22□□□□□ -0.93
PDGFC-201ENST00000274071 DPP3Q9NY33 737 aa9.22□□□□□ -0.93
PDGFC-201ENST00000274071 GMPR2Q9P2T1 348 aaKnown RBP9.22□□□□□ -0.93
PDGFC-201ENST00000274071 KCNU1A8MYU2 1149 aa9.22□□□□□ -0.93
PDGFC-201ENST00000274071 ZNF487B1APH4 448 aa9.22□□□□□ -0.93
PDGFC-201ENST00000274071 SULT1B1O43704 296 aa9.22□□□□□ -0.93
PDGFC-201ENST00000274071 ZNF623O75123 536 aa9.22□□□□□ -0.93
PDGFC-201ENST00000274071 PPM1BO75688 479 aa9.22□□□□□ -0.93
PDGFC-201ENST00000274071 CCNE2O96020 404 aa9.22□□□□□ -0.93
PDGFC-201ENST00000274071 CHRNA1P02708 482 aa9.22□□□□□ -0.93
PDGFC-201ENST00000274071 DEFA1P59665 94 aa9.22□□□□□ -0.93
PDGFC-201ENST00000274071 DEFA3P59666 94 aa9.22□□□□□ -0.93
PDGFC-201ENST00000274071 PPP3CAQ08209 521 aa9.22□□□□□ -0.93
PDGFC-201ENST00000274071 EFR3AQ14156 821 aa9.22□□□□□ -0.93
PDGFC-201ENST00000274071 IMPG1Q17R60 797 aa9.22□□□□□ -0.93
PDGFC-201ENST00000274071 GPAT3Q53EU6 434 aa9.22□□□□□ -0.93
PDGFC-201ENST00000274071 PRR16Q569H4 304 aa9.22□□□□□ -0.93
PDGFC-201ENST00000274071 FAM26DQ5JW98 314 aa9.22□□□□□ -0.93
PDGFC-201ENST00000274071 LRRC8EQ6NSJ5 796 aa9.22□□□□□ -0.93
PDGFC-201ENST00000274071 PNCKQ6P2M8 343 aa9.22□□□□□ -0.93
PDGFC-201ENST00000274071 NRARPQ7Z6K4 114 aa9.22□□□□□ -0.93
PDGFC-201ENST00000274071 MICU2Q8IYU8 434 aa9.22□□□□□ -0.93
PDGFC-201ENST00000274071 CHCHD4Q8N4Q1 142 aa9.22□□□□□ -0.93
PDGFC-201ENST00000274071 ZFPM2Q8WW38 1151 aa9.22□□□□□ -0.93
PDGFC-201ENST00000274071 AKT1S1Q96B36 256 aa9.22□□□□□ -0.93
PDGFC-201ENST00000274071 ZNF300Q96RE9 604 aaPredicted RBP9.22□□□□□ -0.93
PDGFC-201ENST00000274071 BCL7BQ9BQE9 202 aa9.22□□□□□ -0.93
PDGFC-201ENST00000274071 PDGFDQ9GZP0 370 aaPredicted RBP9.22□□□□□ -0.93
PDGFC-201ENST00000274071 UPF3AQ9H1J1 476 aaKnown RBP9.22□□□□□ -0.93
PDGFC-201ENST00000274071 VAT1LQ9HCJ6 419 aa9.22□□□□□ -0.93
PDGFC-201ENST00000274071 DMAC2Q9NW81 257 aa9.22□□□□□ -0.93
PDGFC-201ENST00000274071 RAB20Q9NX57 234 aa9.22□□□□□ -0.93
PDGFC-201ENST00000274071 OPTCQ9UBM4 332 aa9.22□□□□□ -0.93
PDGFC-201ENST00000274071 PNMA8BQ9ULN7 279 aaPredicted RBP9.22□□□□□ -0.93
PDGFC-201ENST00000274071 SCML1Q9UN30 329 aa9.22□□□□□ -0.93
PDGFC-201ENST00000274071 CNTNAP1P78357 1384 aa9.22□□□□□ -0.93
PDGFC-201ENST00000274071 LINC00862A6NCI5 91 aa9.21□□□□□ -0.93
PDGFC-201ENST00000274071 OR6C70A6NIJ9 312 aa9.21□□□□□ -0.93
PDGFC-201ENST00000274071 C2orf81A6NN90 581 aa9.21□□□□□ -0.93
PDGFC-201ENST00000274071 ZNF99A8MXY4 864 aaPredicted RBP9.21□□□□□ -0.93
PDGFC-201ENST00000274071 PRSS44E7EML9 344 aa9.21□□□□□ -0.93
PDGFC-201ENST00000274071 ARHGEF9O43307 516 aa9.21□□□□□ -0.93
PDGFC-201ENST00000274071 KPNA6O60684 536 aa9.21□□□□□ -0.93
PDGFC-201ENST00000274071 PLA2G6O60733 806 aa9.21□□□□□ -0.93
PDGFC-201ENST00000274071 HSPA4LO95757 839 aa9.21□□□□□ -0.93
PDGFC-201ENST00000274071 UNGP13051 313 aaPredicted RBP9.21□□□□□ -0.93
PDGFC-201ENST00000274071 MSH3P20585 1137 aa9.21□□□□□ -0.93
PDGFC-201ENST00000274071 ATP6V1B2P21281 511 aa9.21□□□□□ -0.93
PDGFC-201ENST00000274071 ERP29P30040 261 aaKnown RBP9.21□□□□□ -0.93
PDGFC-201ENST00000274071 CSTF2P33240 577 aaKnown RBP eCLIP9.21□□□□□ -0.933e-8■■■■■ 30.8
PDGFC-201ENST00000274071 GCLMP48507 274 aa9.21□□□□□ -0.93
PDGFC-201ENST00000274071 SCNN1GP51170 649 aa9.21□□□□□ -0.93
PDGFC-201ENST00000274071 ARHGDIBP52566 201 aa9.21□□□□□ -0.93
PDGFC-201ENST00000274071 MFAP3P55082 362 aa9.21□□□□□ -0.93
PDGFC-201ENST00000274071 PSMC5P62195 406 aa9.21□□□□□ -0.93
PDGFC-201ENST00000274071 TEKQ02763 1124 aa9.21□□□□□ -0.93
PDGFC-201ENST00000274071 STARD3Q14849 445 aa9.21□□□□□ -0.93
PDGFC-201ENST00000274071 ZIK1Q3SY52 487 aaPredicted RBP9.21□□□□□ -0.93
PDGFC-201ENST00000274071 RBM48Q5RL73 367 aaKnown RBP9.21□□□□□ -0.93
PDGFC-201ENST00000274071 TMEM81Q6P7N7 255 aa9.21□□□□□ -0.93
PDGFC-201ENST00000274071 NAPRTQ6XQN6 538 aa9.21□□□□□ -0.93
PDGFC-201ENST00000274071 ZNF517Q6ZMY9 492 aaPredicted RBP9.21□□□□□ -0.93
PDGFC-201ENST00000274071 ANKS3Q6ZW76 656 aa9.21□□□□□ -0.93
PDGFC-201ENST00000274071 CREB3L2Q70SY1 520 aa9.21□□□□□ -0.93
PDGFC-201ENST00000274071 PLCZ1Q86YW0 608 aa9.21□□□□□ -0.93
PDGFC-201ENST00000274071 BBS7Q8IWZ6 715 aa9.21□□□□□ -0.93
PDGFC-201ENST00000274071 ZNF444Q8N0Y2 327 aaPredicted RBP9.21□□□□□ -0.93
PDGFC-201ENST00000274071 MCUQ8NE86 351 aa9.21□□□□□ -0.93
PDGFC-201ENST00000274071 OR52H1Q8NGJ2 320 aa9.21□□□□□ -0.93
PDGFC-201ENST00000274071 SLC7A6Q92536 515 aa9.21□□□□□ -0.93
PDGFC-201ENST00000274071 LRRC39Q96DD0 335 aa9.21□□□□□ -0.93
PDGFC-201ENST00000274071 SAMD11Q96NU1 681 aa9.21□□□□□ -0.93
PDGFC-201ENST00000274071 GAD1Q99259 594 aa9.21□□□□□ -0.93
PDGFC-201ENST00000274071 KATNAL1Q9BW62 490 aa9.21□□□□□ -0.93
PDGFC-201ENST00000274071 CDADC1Q9BWV3 514 aa9.21□□□□□ -0.93
PDGFC-201ENST00000274071 PCIF1Q9H4Z3 704 aa9.21□□□□□ -0.93
PDGFC-201ENST00000274071 BRD7Q9NPI1 651 aa9.21□□□□□ -0.93
PDGFC-201ENST00000274071 TMEM39AQ9NV64 488 aa9.21□□□□□ -0.93
PDGFC-201ENST00000274071 SIRT5Q9NXA8 310 aa9.21□□□□□ -0.93
PDGFC-201ENST00000274071 NUFIP1Q9UHK0 495 aaKnown RBP9.21□□□□□ -0.93
PDGFC-201ENST00000274071 OSGIN1Q9UJX0 560 aa9.21□□□□□ -0.93
PDGFC-201ENST00000274071 PCOLCE2Q9UKZ9 415 aa9.21□□□□□ -0.93
PDGFC-201ENST00000274071 SNX6Q9UNH7 406 aa9.21□□□□□ -0.93
PDGFC-201ENST00000274071 SRCAPQ6ZRS2 3230 aa9.21□□□□□ -0.93
PDGFC-201ENST00000274071 MEIOCA2RUB1 952 aa9.21□□□□□ -0.94
PDGFC-201ENST00000274071 USP17L3A6NCW0 530 aa9.21□□□□□ -0.94
PDGFC-201ENST00000274071 USP17L4A6NCW7 530 aa9.21□□□□□ -0.94
PDGFC-201ENST00000274071 F8W810 466 aa9.21□□□□□ -0.94
PDGFC-201ENST00000274071 H0YAE9 185 aa9.21□□□□□ -0.94
PDGFC-201ENST00000274071 ACADMP11310 421 aa9.21□□□□□ -0.94
PDGFC-201ENST00000274071 ZNF30P17039 623 aa9.21□□□□□ -0.94
PDGFC-201ENST00000274071 ITGA2P17301 1181 aa9.21□□□□□ -0.94
PDGFC-201ENST00000274071 HTR7P34969 479 aa9.21□□□□□ -0.94
PDGFC-201ENST00000274071 TRIM23P36406 574 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms