RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 CYP4F2P78329 520 aa8.96□□□□□ -0.98
TPM3-201ENST00000271850 MYL5Q02045 173 aa8.96□□□□□ -0.98
TPM3-201ENST00000271850 UBXN1Q04323 297 aa8.96□□□□□ -0.98
TPM3-201ENST00000271850 TRAF2Q12933 501 aa8.96□□□□□ -0.98
TPM3-201ENST00000271850 EIF3IQ13347 325 aaKnown RBP8.96□□□□□ -0.98
TPM3-201ENST00000271850 NR1D2Q14995 579 aa8.96□□□□□ -0.98
TPM3-201ENST00000271850 ERMARDQ5T6L9 678 aa8.96□□□□□ -0.98
TPM3-201ENST00000271850 ERAP2Q6P179 960 aa8.96□□□□□ -0.98
TPM3-201ENST00000271850 PNCKQ6P2M8 343 aa8.96□□□□□ -0.98
TPM3-201ENST00000271850 DCUN1D2Q6PH85 259 aa8.96□□□□□ -0.98
TPM3-201ENST00000271850 ZNF438Q7Z4V0 828 aa8.96□□□□□ -0.98
TPM3-201ENST00000271850 HSD11B1LQ7Z5J1 315 aa8.96□□□□□ -0.98
TPM3-201ENST00000271850 TAF8Q7Z7C8 310 aa8.96□□□□□ -0.98
TPM3-201ENST00000271850 TSPAN33Q86UF1 283 aa8.96□□□□□ -0.98
TPM3-201ENST00000271850 FAM46DQ8NEK8 389 aa8.96□□□□□ -0.98
TPM3-201ENST00000271850 GPBAR1Q8TDU6 330 aa8.96□□□□□ -0.98
TPM3-201ENST00000271850 EXTL1Q92935 676 aa8.96□□□□□ -0.98
TPM3-201ENST00000271850 USP7Q93009 1102 aa8.96□□□□□ -0.98
TPM3-201ENST00000271850 CCDC97Q96F63 343 aaPredicted RBP8.96□□□□□ -0.98
TPM3-201ENST00000271850 PSKH2Q96QS6 385 aa8.96□□□□□ -0.98
TPM3-201ENST00000271850 FRMD8Q9BZ67 464 aaPredicted RBP8.96□□□□□ -0.98
TPM3-201ENST00000271850 ATP13A3Q9H7F0 1226 aa8.96□□□□□ -0.98
TPM3-201ENST00000271850 RDH14Q9HBH5 336 aa8.96□□□□□ -0.98
TPM3-201ENST00000271850 CYP4F12Q9HCS2 524 aa8.96□□□□□ -0.98
TPM3-201ENST00000271850 TMEM9Q9P0T7 183 aa8.96□□□□□ -0.98
TPM3-201ENST00000271850 LRIT1Q9P2V4 623 aa8.96□□□□□ -0.98
TPM3-201ENST00000271850 PCDHGC4Q9Y5F7 938 aa8.96□□□□□ -0.98
TPM3-201ENST00000271850 NAV2Q8IVL1 2488 aa8.96□□□□□ -0.98
TPM3-201ENST00000271850 FLNCQ14315 2725 aa8.96□□□□□ -0.98
TPM3-201ENST00000271850 NPIPB15A6NHN6 443 aaPredicted RBP8.95□□□□□ -0.98
TPM3-201ENST00000271850 ARHGAP42A6NI28 874 aa8.95□□□□□ -0.98
TPM3-201ENST00000271850 LRRC53A6NM62 1247 aa8.95□□□□□ -0.98
TPM3-201ENST00000271850 NUDT21O43809 227 aaKnown RBP8.95□□□□□ -0.98
TPM3-201ENST00000271850 MAFKO60675 156 aa8.95□□□□□ -0.98
TPM3-201ENST00000271850 HEXIM1O94992 359 aaKnown RBP8.95□□□□□ -0.98
TPM3-201ENST00000271850 LIPCP11150 499 aa8.95□□□□□ -0.98
TPM3-201ENST00000271850 CCNB1P14635 433 aa8.95□□□□□ -0.98
TPM3-201ENST00000271850 PNLIPP16233 465 aa8.95□□□□□ -0.98
TPM3-201ENST00000271850 SERPINA4P29622 427 aa8.95□□□□□ -0.98
TPM3-201ENST00000271850 ETV3P41162 512 aa8.95□□□□□ -0.98
TPM3-201ENST00000271850 POLD2P49005 469 aa8.95□□□□□ -0.98
TPM3-201ENST00000271850 SCNN1BP51168 640 aa8.95□□□□□ -0.98
TPM3-201ENST00000271850 MAXP61244 160 aa8.95□□□□□ -0.98
TPM3-201ENST00000271850 BCL2L1Q07817 233 aa8.95□□□□□ -0.98
TPM3-201ENST00000271850 IL10RBQ08334 325 aa8.95□□□□□ -0.98
TPM3-201ENST00000271850 NSUN2Q08J23 767 aaKnown RBP eCLIP8.95□□□□□ -0.98
TPM3-201ENST00000271850 GRM3Q14832 879 aa8.95□□□□□ -0.98
TPM3-201ENST00000271850 CLCA4Q14CN2 919 aa8.95□□□□□ -0.98
TPM3-201ENST00000271850 SMTNL2Q2TAL5 461 aa8.95□□□□□ -0.98
TPM3-201ENST00000271850 HEATR4Q86WZ0 1026 aa8.95□□□□□ -0.98
TPM3-201ENST00000271850 CPNE8Q86YQ8 564 aa8.95□□□□□ -0.98
TPM3-201ENST00000271850 JAMLQ86YT9 394 aa8.95□□□□□ -0.98
TPM3-201ENST00000271850 NAGSQ8N159 534 aa8.95□□□□□ -0.98
TPM3-201ENST00000271850 RCBTB1Q8NDN9 531 aa8.95□□□□□ -0.98
TPM3-201ENST00000271850 FNIP1Q8TF40 1166 aa8.95□□□□□ -0.98
TPM3-201ENST00000271850 SCG3Q8WXD2 468 aaKnown RBP8.95□□□□□ -0.98
TPM3-201ENST00000271850 COL26A1Q96A83 441 aa8.95□□□□□ -0.98
TPM3-201ENST00000271850 DTD2Q96FN9 168 aa8.95□□□□□ -0.98
TPM3-201ENST00000271850 TMEM74Q96NL1 305 aa8.95□□□□□ -0.98
TPM3-201ENST00000271850 MGME1Q9BQP7 344 aa8.95□□□□□ -0.98
TPM3-201ENST00000271850 FUCA2Q9BTY2 467 aa8.95□□□□□ -0.98
TPM3-201ENST00000271850 CINPQ9BW66 212 aaPredicted RBP8.95□□□□□ -0.98
TPM3-201ENST00000271850 TEX101Q9BY14 249 aa8.95□□□□□ -0.98
TPM3-201ENST00000271850 TRIM4Q9C037 500 aa8.95□□□□□ -0.98
TPM3-201ENST00000271850 HAUS4Q9H6D7 363 aa8.95□□□□□ -0.98
TPM3-201ENST00000271850 WDR26Q9H7D7 661 aa8.95□□□□□ -0.98
TPM3-201ENST00000271850 CARS2Q9HA77 564 aaKnown RBP8.95□□□□□ -0.98
TPM3-201ENST00000271850 NOD2Q9HC29 1040 aa8.95□□□□□ -0.98
TPM3-201ENST00000271850 STARD5Q9NSY2 213 aa8.95□□□□□ -0.98
TPM3-201ENST00000271850 SUFUQ9UMX1 484 aa8.95□□□□□ -0.98
TPM3-201ENST00000271850 IGHV5-10-1A0A0J9YXX1 117 aa8.94□□□□□ -0.98
TPM3-201ENST00000271850 CACNB4O00305 520 aaPredicted RBP8.94□□□□□ -0.98
TPM3-201ENST00000271850 PPM1DO15297 605 aa8.94□□□□□ -0.98
TPM3-201ENST00000271850 SIAH2O43255 324 aa8.94□□□□□ -0.98
TPM3-201ENST00000271850 SLC28A2O43868 658 aa8.94□□□□□ -0.98
TPM3-201ENST00000271850 FZD6O60353 706 aa8.94□□□□□ -0.98
TPM3-201ENST00000271850 ECEL1O95672 775 aa8.94□□□□□ -0.98
TPM3-201ENST00000271850 EML2O95834 649 aa8.94□□□□□ -0.98
TPM3-201ENST00000271850 PDHA1P08559 390 aa8.94□□□□□ -0.98
TPM3-201ENST00000271850 FAM87AP0C7U9 286 aa8.94□□□□□ -0.98
TPM3-201ENST00000271850 FGF3P11487 239 aaPredicted RBP8.94□□□□□ -0.98
TPM3-201ENST00000271850 MYCLP1P12525 358 aaPredicted RBP8.94□□□□□ -0.98
TPM3-201ENST00000271850 CD46P15529 392 aa8.94□□□□□ -0.98
TPM3-201ENST00000271850 FERP16591 822 aa8.94□□□□□ -0.98
TPM3-201ENST00000271850 AMPD1P23109 780 aa8.94□□□□□ -0.98
TPM3-201ENST00000271850 IL4RP24394 825 aa8.94□□□□□ -0.98
TPM3-201ENST00000271850 CD1CP29017 333 aa8.94□□□□□ -0.98
TPM3-201ENST00000271850 AP1S1P61966 158 aa8.94□□□□□ -0.98
TPM3-201ENST00000271850 CDK3Q00526 305 aa8.94□□□□□ -0.98
TPM3-201ENST00000271850 NFATC3Q12968 1075 aa8.94□□□□□ -0.98
TPM3-201ENST00000271850 RFTN1Q14699 578 aaPredicted RBP8.94□□□□□ -0.98
TPM3-201ENST00000271850 LBRQ14739 615 aaKnown RBP8.94□□□□□ -0.98
TPM3-201ENST00000271850 DPYSL2Q16555 572 aa8.94□□□□□ -0.98
TPM3-201ENST00000271850 PPP6R3Q5H9R7 873 aaPredicted RBP8.94□□□□□ -0.98
TPM3-201ENST00000271850 FAM182AQ5T1J6 154 aa8.94□□□□□ -0.98
TPM3-201ENST00000271850 TMCO4Q5TGY1 634 aa8.94□□□□□ -0.98
TPM3-201ENST00000271850 NKAIN2Q5VXU1 208 aa8.94□□□□□ -0.98
TPM3-201ENST00000271850 POLNQ7Z5Q5 900 aa8.94□□□□□ -0.98
TPM3-201ENST00000271850 TECPR1Q7Z6L1 1165 aa8.94□□□□□ -0.98
TPM3-201ENST00000271850 AOPEPQ8N6M6 819 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms