RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 QRFPRQ96P65 431 aa16.72■□□□□ 0.27
PHRF1-201ENST00000264555 SEZ6LQ9BYH1 1024 aa16.72■□□□□ 0.27
PHRF1-201ENST00000264555 ARHGEF3Q9NR81 526 aa16.72■□□□□ 0.27
PHRF1-201ENST00000264555 MYH1P12882 1939 aa16.72■□□□□ 0.27
PHRF1-201ENST00000264555 DYTNA2CJ06 578 aa16.71■□□□□ 0.27
PHRF1-201ENST00000264555 ZNF487B1APH4 448 aa16.71■□□□□ 0.27
PHRF1-201ENST00000264555 PEX1O43933 1283 aa16.71■□□□□ 0.27
PHRF1-201ENST00000264555 SH3BGRLO75368 114 aa16.71■□□□□ 0.27
PHRF1-201ENST00000264555 ALDH6A1Q02252 535 aaKnown RBP16.71■□□□□ 0.27
PHRF1-201ENST00000264555 GK5Q6ZS86 529 aa16.71■□□□□ 0.27
PHRF1-201ENST00000264555 MAGEE2Q8TD90 523 aaPredicted RBP16.71■□□□□ 0.27
PHRF1-201ENST00000264555 TCF12Q99081 682 aa16.71■□□□□ 0.27
PHRF1-201ENST00000264555 PNPLA8Q9NP80 782 aa16.71■□□□□ 0.27
PHRF1-201ENST00000264555 DHRS12A0PJE2 317 aa16.71■□□□□ 0.27
PHRF1-201ENST00000264555 GRM6O15303 877 aa16.71■□□□□ 0.27
PHRF1-201ENST00000264555 NPHS1O60500 1241 aa16.71■□□□□ 0.27
PHRF1-201ENST00000264555 FGF19O95750 216 aa16.71■□□□□ 0.27
PHRF1-201ENST00000264555 PURAQ00577 322 aaKnown RBP16.71■□□□□ 0.27
PHRF1-201ENST00000264555 PRKD1Q15139 912 aaPredicted RBP16.71■□□□□ 0.27
PHRF1-201ENST00000264555 MSS51Q4VC12 460 aa16.71■□□□□ 0.27
PHRF1-201ENST00000264555 GDF6Q6KF10 455 aaPredicted RBP16.71■□□□□ 0.27
PHRF1-201ENST00000264555 CNSTQ6PJW8 725 aa16.71■□□□□ 0.27
PHRF1-201ENST00000264555 HPS6Q86YV9 775 aa16.71■□□□□ 0.27
PHRF1-201ENST00000264555 PQLC1Q8N2U9 271 aa16.71■□□□□ 0.27
PHRF1-201ENST00000264555 GPR21Q99679 349 aa16.71■□□□□ 0.27
PHRF1-201ENST00000264555 C16orf70Q9BSU1 422 aa16.71■□□□□ 0.27
PHRF1-201ENST00000264555 PSMD13Q9UNM6 376 aa16.71■□□□□ 0.27
PHRF1-201ENST00000264555 TPRKBQ9Y3C4 175 aa16.71■□□□□ 0.27
PHRF1-201ENST00000264555 GLYATL1P3A0A0U1RQE8 302 aa16.71■□□□□ 0.27
PHRF1-201ENST00000264555 SLC38A8A6NNN8 435 aa16.71■□□□□ 0.27
PHRF1-201ENST00000264555 PIRO00625 290 aa16.71■□□□□ 0.27
PHRF1-201ENST00000264555 GLUD1P00367 558 aa16.71■□□□□ 0.27
PHRF1-201ENST00000264555 GOT2P00505 430 aaKnown RBP16.71■□□□□ 0.27
PHRF1-201ENST00000264555 PCYT1AP49585 367 aa16.71■□□□□ 0.27
PHRF1-201ENST00000264555 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.71■□□□□ 0.27
PHRF1-201ENST00000264555 PAFAH1B3Q15102 231 aaKnown RBP16.71■□□□□ 0.27
PHRF1-201ENST00000264555 DEPDC1Q5TB30 811 aa16.71■□□□□ 0.27
PHRF1-201ENST00000264555 OSTM1Q86WC4 334 aa16.71■□□□□ 0.27
PHRF1-201ENST00000264555 CIR1Q86X95 450 aaPredicted RBP16.71■□□□□ 0.27
PHRF1-201ENST00000264555 POP5Q969H6 163 aaKnown RBP16.71■□□□□ 0.27
PHRF1-201ENST00000264555 TADA1Q96BN2 335 aa16.71■□□□□ 0.27
PHRF1-201ENST00000264555 CEP44Q9C0F1 390 aa16.71■□□□□ 0.27
PHRF1-201ENST00000264555 PDLIM7Q9NR12 457 aa16.71■□□□□ 0.27
PHRF1-201ENST00000264555 ADAMTS5Q9UNA0 930 aa16.71■□□□□ 0.27
PHRF1-201ENST00000264555 FAM220BPB1ANY3 271 aa16.71■□□□□ 0.27
PHRF1-201ENST00000264555 ACLYP53396 1101 aa16.71■□□□□ 0.27
PHRF1-201ENST00000264555 DLG2Q15700 870 aa16.71■□□□□ 0.27
PHRF1-201ENST00000264555 SVOPQ8N4V2 548 aa16.71■□□□□ 0.27
PHRF1-201ENST00000264555 HEXDCQ8WVB3 486 aa16.71■□□□□ 0.27
PHRF1-201ENST00000264555 PEBP4Q96S96 227 aa16.71■□□□□ 0.27
PHRF1-201ENST00000264555 C1QTNF7Q9BXJ2 289 aa16.71■□□□□ 0.27
PHRF1-201ENST00000264555 OSBPL6Q9BZF3 934 aa16.71■□□□□ 0.27
PHRF1-201ENST00000264555 CXorf49A8MYA2 514 aaPredicted RBP16.71■□□□□ 0.26
PHRF1-201ENST00000264555 GPR1P46091 355 aa16.71■□□□□ 0.26
PHRF1-201ENST00000264555 CLDN10P78369 228 aa16.71■□□□□ 0.26
PHRF1-201ENST00000264555 CPSF6Q16630 551 aaKnown RBP eCLIP16.71■□□□□ 0.26
PHRF1-201ENST00000264555 TJAP1Q5JTD0 557 aa16.71■□□□□ 0.26
PHRF1-201ENST00000264555 TAPT1Q6NXT6 567 aa16.71■□□□□ 0.26
PHRF1-201ENST00000264555 PQLC3Q8N755 202 aa16.71■□□□□ 0.26
PHRF1-201ENST00000264555 CLPTM1LQ96KA5 538 aa16.71■□□□□ 0.26
PHRF1-201ENST00000264555 ACSS2Q9NR19 701 aa16.71■□□□□ 0.26
PHRF1-201ENST00000264555 FNIP2Q9P278 1114 aa16.71■□□□□ 0.26
PHRF1-201ENST00000264555 CNTN6Q9UQ52 1028 aa16.71■□□□□ 0.26
PHRF1-201ENST00000264555 ANKDD1BA6NHY2 528 aa16.7■□□□□ 0.26
PHRF1-201ENST00000264555 FAM20BO75063 409 aa16.7■□□□□ 0.26
PHRF1-201ENST00000264555 SPATA31D3P0C874 917 aa16.7■□□□□ 0.26
PHRF1-201ENST00000264555 SPATA31D4Q6ZUB0 917 aa16.7■□□□□ 0.26
PHRF1-201ENST00000264555 HFE2Q6ZVN8 426 aa16.7■□□□□ 0.26
PHRF1-201ENST00000264555 PGAM4Q8N0Y7 254 aa16.7■□□□□ 0.26
PHRF1-201ENST00000264555 UTP15Q8TED0 518 aaKnown RBP16.7■□□□□ 0.26
PHRF1-201ENST00000264555 DNAJC1Q96KC8 554 aaKnown RBP16.7■□□□□ 0.26
PHRF1-201ENST00000264555 LENG8Q96PV6 779 aaPredicted RBP16.7■□□□□ 0.26
PHRF1-201ENST00000264555 CADM1Q9BY67 442 aaKnown RBP16.7■□□□□ 0.26
PHRF1-201ENST00000264555 PRRG3Q9BZD7 231 aa16.7■□□□□ 0.26
PHRF1-201ENST00000264555 HPS4Q9NQG7 708 aa16.7■□□□□ 0.26
PHRF1-201ENST00000264555 KLHL28Q9NXS3 571 aa16.7■□□□□ 0.26
PHRF1-201ENST00000264555 ZNHIT2Q9UHR6 403 aa16.7■□□□□ 0.26
PHRF1-201ENST00000264555 TAS2R39P59534 338 aa16.7■□□□□ 0.26
PHRF1-201ENST00000264555 ABHD8Q96I13 439 aa16.7■□□□□ 0.26
PHRF1-201ENST00000264555 KRT84Q9NSB2 600 aa16.7■□□□□ 0.26
PHRF1-201ENST00000264555 CLIC5Q9NZA1 410 aa16.7■□□□□ 0.26
PHRF1-201ENST00000264555 VPS51Q9UID3 782 aa16.7■□□□□ 0.26
PHRF1-201ENST00000264555 IGKV6-21A0A0C4DH24 114 aa16.7■□□□□ 0.26
PHRF1-201ENST00000264555 LSM12Q3MHD2 195 aaKnown RBP16.7■□□□□ 0.26
PHRF1-201ENST00000264555 TTC23Q5W5X9 447 aa16.7■□□□□ 0.26
PHRF1-201ENST00000264555 GCNT7Q6ZNI0 430 aa16.7■□□□□ 0.26
PHRF1-201ENST00000264555 C11orf74Q86VG3 221 aa16.7■□□□□ 0.26
PHRF1-201ENST00000264555 CLVS1Q8IUQ0 354 aaPredicted RBP16.7■□□□□ 0.26
PHRF1-201ENST00000264555 DBF4BQ8NFT6 615 aa16.7■□□□□ 0.26
PHRF1-201ENST00000264555 TWIST2Q8WVJ9 160 aa16.7■□□□□ 0.26
PHRF1-201ENST00000264555 TIFAQ96CG3 184 aa16.7■□□□□ 0.26
PHRF1-201ENST00000264555 RIBC2Q9H4K1 309 aa16.7■□□□□ 0.26
PHRF1-201ENST00000264555 REEP1Q9H902 201 aa16.7■□□□□ 0.26
PHRF1-201ENST00000264555 CCL22O00626 93 aa16.7■□□□□ 0.26
PHRF1-201ENST00000264555 GABRDO14764 452 aa16.7■□□□□ 0.26
PHRF1-201ENST00000264555 SLC25A14O95258 325 aaPredicted RBP16.7■□□□□ 0.26
PHRF1-201ENST00000264555 CXCR2P25025 360 aa16.7■□□□□ 0.26
PHRF1-201ENST00000264555 SLC1A2P43004 574 aa16.7■□□□□ 0.26
PHRF1-201ENST00000264555 FOLH1Q04609 750 aa16.7■□□□□ 0.26
PHRF1-201ENST00000264555 XKR6Q5GH73 641 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms