RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 ODF2Q5BJF6 829 aa16.05■□□□□ 0.16
USE1-201ENST00000263897 LRRC66Q68CR7 880 aa16.05■□□□□ 0.16
USE1-201ENST00000263897 MFSD7Q6UXD7 560 aa16.05■□□□□ 0.16
USE1-201ENST00000263897 RFLNAQ6ZTI6 216 aa16.05■□□□□ 0.16
USE1-201ENST00000263897 TAF8Q7Z7C8 310 aa16.05■□□□□ 0.16
USE1-201ENST00000263897 HEATR4Q86WZ0 1026 aa16.05■□□□□ 0.16
USE1-201ENST00000263897 CCDC170Q8IYT3 715 aa16.05■□□□□ 0.16
USE1-201ENST00000263897 HNRNPLLQ8WVV9 542 aaKnown RBP16.05■□□□□ 0.16
USE1-201ENST00000263897 GRAMD1AQ96CP6 724 aa16.05■□□□□ 0.16
USE1-201ENST00000263897 CCDC3Q9BQI4 270 aa16.05■□□□□ 0.16
USE1-201ENST00000263897 ABCG8Q9H221 673 aa16.05■□□□□ 0.16
USE1-201ENST00000263897 PCDH9Q9HC56 1237 aa16.05■□□□□ 0.16
USE1-201ENST00000263897 MOSPD1Q9UJG1 213 aa16.05■□□□□ 0.16
USE1-201ENST00000263897 LHX6Q9UPM6 363 aa16.05■□□□□ 0.16
USE1-201ENST00000263897 ALG6Q9Y672 507 aa16.05■□□□□ 0.16
USE1-201ENST00000263897 TLX3O43711 291 aaPredicted RBP16.04■□□□□ 0.16
USE1-201ENST00000263897 SPOPO43791 374 aa16.04■□□□□ 0.16
USE1-201ENST00000263897 TCEA3O75764 348 aa16.04■□□□□ 0.16
USE1-201ENST00000263897 MMP2P08253 660 aa16.04■□□□□ 0.16
USE1-201ENST00000263897 CD86P42081 329 aa16.04■□□□□ 0.16
USE1-201ENST00000263897 SKOR1P84550 965 aa16.04■□□□□ 0.16
USE1-201ENST00000263897 CDK3Q00526 305 aa16.04■□□□□ 0.16
USE1-201ENST00000263897 AP1B1Q10567 949 aa16.04■□□□□ 0.16
USE1-201ENST00000263897 ZBTB17Q13105 803 aa16.04■□□□□ 0.16
USE1-201ENST00000263897 RAET1GQ6H3X3 334 aa16.04■□□□□ 0.16
USE1-201ENST00000263897 NPNTQ6UXI9 565 aa16.04■□□□□ 0.16
USE1-201ENST00000263897 RFX6Q8HWS3 928 aa16.04■□□□□ 0.16
USE1-201ENST00000263897 RAVER1Q8IY67 606 aaKnown RBP16.04■□□□□ 0.16
USE1-201ENST00000263897 KYQ8NBH2 561 aa16.04■□□□□ 0.16
USE1-201ENST00000263897 FAM46DQ8NEK8 389 aa16.04■□□□□ 0.16
USE1-201ENST00000263897 GPR156Q8NFN8 814 aa16.04■□□□□ 0.16
USE1-201ENST00000263897 OR6C4Q8NGE1 309 aa16.04■□□□□ 0.16
USE1-201ENST00000263897 WDR48Q8TAF3 677 aa16.04■□□□□ 0.16
USE1-201ENST00000263897 FGF11Q92914 225 aa16.04■□□□□ 0.16
USE1-201ENST00000263897 SCAMP4Q969E2 229 aa16.04■□□□□ 0.16
USE1-201ENST00000263897 AP2M1Q96CW1 435 aa16.04■□□□□ 0.16
USE1-201ENST00000263897 OLFM3Q96PB7 478 aa16.04■□□□□ 0.16
USE1-201ENST00000263897 LYSMD1Q96S90 227 aa16.04■□□□□ 0.16
USE1-201ENST00000263897 FRMD8Q9BZ67 464 aaPredicted RBP16.04■□□□□ 0.16
USE1-201ENST00000263897 BRD8Q9H0E9 1235 aa16.04■□□□□ 0.16
USE1-201ENST00000263897 RBSNQ9H1K0 784 aa16.04■□□□□ 0.16
USE1-201ENST00000263897 CD84Q9UIB8 345 aa16.04■□□□□ 0.16
USE1-201ENST00000263897 DNPEPQ9ULA0 475 aa16.04■□□□□ 0.16
USE1-201ENST00000263897 PCDHA13Q9Y5I0 950 aa16.04■□□□□ 0.16
USE1-201ENST00000263897 WDFY3Q8IZQ1 3526 aa16.03■□□□□ 0.16
USE1-201ENST00000263897 ITPR1Q14643 2758 aa16.03■□□□□ 0.16
USE1-201ENST00000263897 GOLGA6CA6NDK9 693 aa16.03■□□□□ 0.16
USE1-201ENST00000263897 GOLGA6BA6NDN3 693 aa16.03■□□□□ 0.16
USE1-201ENST00000263897 CAPN8A6NHC0 703 aa16.03■□□□□ 0.16
USE1-201ENST00000263897 ANKRD66B4E2M5 251 aa16.03■□□□□ 0.16
USE1-201ENST00000263897 CASC3O15234 703 aaKnown RBP16.03■□□□□ 0.16
USE1-201ENST00000263897 BRINP1O60477 761 aa16.03■□□□□ 0.16
USE1-201ENST00000263897 CLDN7O95471 211 aa16.03■□□□□ 0.16
USE1-201ENST00000263897 GOLGA6DP0CG33 693 aa16.03■□□□□ 0.16
USE1-201ENST00000263897 ACTN2P35609 894 aa16.03■□□□□ 0.16
USE1-201ENST00000263897 EIF2S3P41091 472 aaKnown RBP16.03■□□□□ 0.16
USE1-201ENST00000263897 CDKN2BP42772 138 aa16.03■□□□□ 0.16
USE1-201ENST00000263897 GPR1P46091 355 aa16.03■□□□□ 0.16
USE1-201ENST00000263897 LSSP48449 732 aa16.03■□□□□ 0.16
USE1-201ENST00000263897 ZNF75DP51815 510 aa16.03■□□□□ 0.16
USE1-201ENST00000263897 STC1P52823 247 aa16.03■□□□□ 0.16
USE1-201ENST00000263897 SPA17Q15506 151 aa16.03■□□□□ 0.16
USE1-201ENST00000263897 TAZQ16635 292 aa16.03■□□□□ 0.16
USE1-201ENST00000263897 COL28A1Q2UY09 1125 aa16.03■□□□□ 0.16
USE1-201ENST00000263897 RBM44Q6ZP01 1051 aaKnown RBP16.03■□□□□ 0.16
USE1-201ENST00000263897 ZNF765Q7L2R6 523 aa16.03■□□□□ 0.16
USE1-201ENST00000263897 LPCAT1Q8NF37 534 aa16.03■□□□□ 0.16
USE1-201ENST00000263897 CCL4L1Q8NHW4 92 aa16.03■□□□□ 0.16
USE1-201ENST00000263897 GPBAR1Q8TDU6 330 aa16.03■□□□□ 0.16
USE1-201ENST00000263897 MRFAP1L1Q96HT8 127 aa16.03■□□□□ 0.16
USE1-201ENST00000263897 POLR1BQ9H9Y6 1135 aa16.03■□□□□ 0.16
USE1-201ENST00000263897 CARS2Q9HA77 564 aaKnown RBP16.03■□□□□ 0.16
USE1-201ENST00000263897 TRNAU1APQ9NX07 287 aaKnown RBP16.03■□□□□ 0.16
USE1-201ENST00000263897 GOLGA6AQ9NYA3 693 aa16.03■□□□□ 0.16
USE1-201ENST00000263897 SLC17A4Q9Y2C5 497 aa16.03■□□□□ 0.16
USE1-201ENST00000263897 COL27A1Q8IZC6 1860 aaPredicted RBP16.03■□□□□ 0.16
USE1-201ENST00000263897 KIF26BQ2KJY2 2108 aa16.03■□□□□ 0.16
USE1-201ENST00000263897 NTN3O00634 580 aaPredicted RBP16.02■□□□□ 0.16
USE1-201ENST00000263897 PPP1R12AO14974 1030 aaPredicted RBP16.02■□□□□ 0.16
USE1-201ENST00000263897 PSTPIP1O43586 416 aa16.02■□□□□ 0.16
USE1-201ENST00000263897 NOBOXO60393 691 aa16.02■□□□□ 0.16
USE1-201ENST00000263897 SOD1P00441 154 aa16.02■□□□□ 0.16
USE1-201ENST00000263897 MPOP05164 745 aa16.02■□□□□ 0.16
USE1-201ENST00000263897 CYLC1P35663 651 aaPredicted RBP16.02■□□□□ 0.16
USE1-201ENST00000263897 POLD2P49005 469 aa16.02■□□□□ 0.16
USE1-201ENST00000263897 NR2C2P49116 596 aa16.02■□□□□ 0.16
USE1-201ENST00000263897 DYNLT1P63172 113 aa16.02■□□□□ 0.16
USE1-201ENST00000263897 TFDP2Q14188 446 aa16.02■□□□□ 0.16
USE1-201ENST00000263897 QPCTQ16769 361 aa16.02■□□□□ 0.16
USE1-201ENST00000263897 FAM182AQ5T1J6 154 aa16.02■□□□□ 0.16
USE1-201ENST00000263897 ADAMTSL4Q6UY14 1074 aa16.02■□□□□ 0.16
USE1-201ENST00000263897 BZW1Q7L1Q6 419 aaKnown RBP16.02■□□□□ 0.16
USE1-201ENST00000263897 NRROSQ86YC3 692 aa16.02■□□□□ 0.16
USE1-201ENST00000263897 NRSN1Q8IZ57 195 aa16.02■□□□□ 0.16
USE1-201ENST00000263897 LSMEM2Q8N112 164 aa16.02■□□□□ 0.16
USE1-201ENST00000263897 SNIP1Q8TAD8 396 aaKnown RBP16.02■□□□□ 0.16
USE1-201ENST00000263897 CCDC74AQ96AQ1 378 aa16.02■□□□□ 0.16
USE1-201ENST00000263897 DCBLD2Q96PD2 775 aa16.02■□□□□ 0.16
USE1-201ENST00000263897 PANX2Q96RD6 677 aa16.02■□□□□ 0.16
USE1-201ENST00000263897 MLPHQ9BV36 600 aaPredicted RBP16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms