RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 CLCN5P51795 746 aa12.38□□□□□ -0.43
CHMP3-201ENST00000263856 AIF1P55008 147 aa12.38□□□□□ -0.43
CHMP3-201ENST00000263856 TRAP1Q12931 704 aaKnown RBP12.38□□□□□ -0.43
CHMP3-201ENST00000263856 TIGD5Q53EQ6 642 aa12.38□□□□□ -0.43
CHMP3-201ENST00000263856 KCTD8Q6ZWB6 473 aa12.38□□□□□ -0.43
CHMP3-201ENST00000263856 LARP4Q71RC2 724 aaKnown RBP eCLIP12.38□□□□□ -0.437e-6■□□□□ 9
CHMP3-201ENST00000263856 BNIPLQ7Z465 357 aa12.38□□□□□ -0.43
CHMP3-201ENST00000263856 MIB1Q86YT6 1006 aa12.38□□□□□ -0.43
CHMP3-201ENST00000263856 CLYBLQ8N0X4 340 aa12.38□□□□□ -0.43
CHMP3-201ENST00000263856 DHRSXQ8N5I4 330 aa12.38□□□□□ -0.43
CHMP3-201ENST00000263856 CALML6Q8TD86 181 aa12.38□□□□□ -0.43
CHMP3-201ENST00000263856 NUDT8Q8WV74 236 aa12.38□□□□□ -0.43
CHMP3-201ENST00000263856 KCTD14Q9BQ13 255 aaPredicted RBP12.38□□□□□ -0.43
CHMP3-201ENST00000263856 TBC1D13Q9NVG8 400 aa12.38□□□□□ -0.43
CHMP3-201ENST00000263856 CMTM6Q9NX76 183 aa12.38□□□□□ -0.43
CHMP3-201ENST00000263856 SLAMF8Q9P0V8 285 aa12.38□□□□□ -0.43
CHMP3-201ENST00000263856 PDHXO00330 501 aa12.38□□□□□ -0.43
CHMP3-201ENST00000263856 KCNE1P15382 129 aa12.38□□□□□ -0.43
CHMP3-201ENST00000263856 IMPDH1P20839 514 aa12.38□□□□□ -0.43
CHMP3-201ENST00000263856 CD247P20963 164 aa12.38□□□□□ -0.43
CHMP3-201ENST00000263856 ALDH3B2P48448 385 aa12.38□□□□□ -0.43
CHMP3-201ENST00000263856 LHX1P48742 406 aa12.38□□□□□ -0.43
CHMP3-201ENST00000263856 DNAJB13P59910 316 aa12.38□□□□□ -0.43
CHMP3-201ENST00000263856 ACAP2Q15057 778 aa12.38□□□□□ -0.43
CHMP3-201ENST00000263856 RBBP7Q16576 425 aa12.38□□□□□ -0.43
CHMP3-201ENST00000263856 AARS2Q5JTZ9 985 aaKnown RBP12.38□□□□□ -0.43
CHMP3-201ENST00000263856 PPP4R4Q6NUP7 873 aa12.38□□□□□ -0.43
CHMP3-201ENST00000263856 ZNF554Q86TJ5 538 aa12.38□□□□□ -0.43
CHMP3-201ENST00000263856 ITFG2Q969R8 447 aa12.38□□□□□ -0.43
CHMP3-201ENST00000263856 TREX1Q9NSU2 369 aa12.38□□□□□ -0.43
CHMP3-201ENST00000263856 WARS2Q9UGM6 360 aaKnown RBP12.38□□□□□ -0.43
CHMP3-201ENST00000263856 CNOT11Q9UKZ1 510 aaKnown RBP12.38□□□□□ -0.43
CHMP3-201ENST00000263856 F8W810 466 aa12.38□□□□□ -0.43
CHMP3-201ENST00000263856 CDK14O94921 469 aa12.38□□□□□ -0.43
CHMP3-201ENST00000263856 GPX3P22352 226 aa12.38□□□□□ -0.43
CHMP3-201ENST00000263856 ELK4P28324 431 aa12.38□□□□□ -0.43
CHMP3-201ENST00000263856 EEF1DP29692 281 aaKnown RBP12.38□□□□□ -0.43
CHMP3-201ENST00000263856 KCNK10P57789 538 aa12.38□□□□□ -0.43
CHMP3-201ENST00000263856 RAB39AQ14964 217 aa12.38□□□□□ -0.43
CHMP3-201ENST00000263856 PSMD5Q16401 504 aa12.38□□□□□ -0.43
CHMP3-201ENST00000263856 CYHR1Q6ZMK1 362 aa12.38□□□□□ -0.43
CHMP3-201ENST00000263856 ISCA2Q86U28 154 aa12.38□□□□□ -0.43
CHMP3-201ENST00000263856 CILP2Q8IUL8 1156 aa12.38□□□□□ -0.43
CHMP3-201ENST00000263856 CNTN4Q8IWV2 1026 aa12.38□□□□□ -0.43
CHMP3-201ENST00000263856 CLEC4FQ8N1N0 589 aa12.38□□□□□ -0.43
CHMP3-201ENST00000263856 PARP8Q8N3A8 854 aa12.38□□□□□ -0.43
CHMP3-201ENST00000263856 BPIFB6Q8NFQ5 453 aa12.38□□□□□ -0.43
CHMP3-201ENST00000263856 OR13C4Q8NGS5 318 aa12.38□□□□□ -0.43
CHMP3-201ENST00000263856 FNDC8Q8TC99 324 aa12.38□□□□□ -0.43
CHMP3-201ENST00000263856 SLC10A4Q96EP9 437 aa12.38□□□□□ -0.43
CHMP3-201ENST00000263856 ACOX2Q99424 681 aa12.38□□□□□ -0.43
CHMP3-201ENST00000263856 ARMC7Q9H6L4 198 aa12.38□□□□□ -0.43
CHMP3-201ENST00000263856 PLGRKTQ9HBL7 147 aa12.38□□□□□ -0.43
CHMP3-201ENST00000263856 E9PAM4 449 aa12.37□□□□□ -0.43
CHMP3-201ENST00000263856 KCNH1O95259 989 aa12.37□□□□□ -0.43
CHMP3-201ENST00000263856 HAPLN1P10915 354 aaPredicted RBP12.37□□□□□ -0.43
CHMP3-201ENST00000263856 ZNF182P17025 639 aaPredicted RBP12.37□□□□□ -0.43
CHMP3-201ENST00000263856 OR4D1Q15615 310 aa12.37□□□□□ -0.43
CHMP3-201ENST00000263856 MARC1Q5VT66 337 aa12.37□□□□□ -0.43
CHMP3-201ENST00000263856 FAM45BPQ6NSW5 357 aa12.37□□□□□ -0.43
CHMP3-201ENST00000263856 BORAQ6PGQ7 559 aa12.37□□□□□ -0.43
CHMP3-201ENST00000263856 GABPB2Q8TAK5 448 aaPredicted RBP12.37□□□□□ -0.43
CHMP3-201ENST00000263856 FAM45AQ8TCE6 357 aa12.37□□□□□ -0.43
CHMP3-201ENST00000263856 PSMG2Q969U7 264 aa12.37□□□□□ -0.43
CHMP3-201ENST00000263856 LRRC58Q96CX6 371 aa12.37□□□□□ -0.43
CHMP3-201ENST00000263856 HMCESQ96FZ2 354 aa12.37□□□□□ -0.43
CHMP3-201ENST00000263856 C9orf16Q9BUW7 83 aa12.37□□□□□ -0.43
CHMP3-201ENST00000263856 ALG2Q9H553 416 aa12.37□□□□□ -0.43
CHMP3-201ENST00000263856 TBC1D23Q9NUY8 699 aa12.37□□□□□ -0.43
CHMP3-201ENST00000263856 GID8Q9NWU2 228 aa12.37□□□□□ -0.43
CHMP3-201ENST00000263856 ABI2Q9NYB9 513 aaPredicted RBP12.37□□□□□ -0.43
CHMP3-201ENST00000263856 PADI4Q9UM07 663 aa12.37□□□□□ -0.43
CHMP3-201ENST00000263856 MAGED1Q9Y5V3 778 aaPredicted RBP12.37□□□□□ -0.43
CHMP3-201ENST00000263856 C1orf232A0A0U1RR37 186 aa12.37□□□□□ -0.43
CHMP3-201ENST00000263856 ENPP3O14638 875 aa12.37□□□□□ -0.43
CHMP3-201ENST00000263856 GABRDO14764 452 aa12.37□□□□□ -0.43
CHMP3-201ENST00000263856 SLC2A3P11169 496 aa12.37□□□□□ -0.43
CHMP3-201ENST00000263856 PRDX3P30048 256 aaKnown RBP12.37□□□□□ -0.43
CHMP3-201ENST00000263856 FMO4P31512 558 aa12.37□□□□□ -0.43
CHMP3-201ENST00000263856 GJA5P36382 358 aa12.37□□□□□ -0.43
CHMP3-201ENST00000263856 PHEXP78562 749 aa12.37□□□□□ -0.43
CHMP3-201ENST00000263856 GNA12Q03113 381 aa12.37□□□□□ -0.43
CHMP3-201ENST00000263856 PM20D1Q6GTS8 502 aa12.37□□□□□ -0.43
CHMP3-201ENST00000263856 RANBP10Q6VN20 620 aa12.37□□□□□ -0.43
CHMP3-201ENST00000263856 TLK2Q86UE8 772 aa12.37□□□□□ -0.43
CHMP3-201ENST00000263856 GPR180Q86V85 440 aa12.37□□□□□ -0.43
CHMP3-201ENST00000263856 OR13J1Q8NGT2 312 aa12.37□□□□□ -0.43
CHMP3-201ENST00000263856 TINF2Q9BSI4 451 aa12.37□□□□□ -0.43
CHMP3-201ENST00000263856 PRKD2Q9BZL6 878 aa12.37□□□□□ -0.43
CHMP3-201ENST00000263856 POLG2Q9UHN1 485 aa12.37□□□□□ -0.43
CHMP3-201ENST00000263856 RNF112Q9ULX5 631 aa12.37□□□□□ -0.43
CHMP3-201ENST00000263856 IRAK2O43187 625 aa12.36□□□□□ -0.43
CHMP3-201ENST00000263856 MAN1A2O60476 641 aa12.36□□□□□ -0.43
CHMP3-201ENST00000263856 CNTN5O94779 1100 aa12.36□□□□□ -0.43
CHMP3-201ENST00000263856 RHOBTB1O94844 696 aa12.36□□□□□ -0.43
CHMP3-201ENST00000263856 LBPP18428 481 aa12.36□□□□□ -0.43
CHMP3-201ENST00000263856 NFKBIAP25963 317 aa12.36□□□□□ -0.43
CHMP3-201ENST00000263856 PCSK1P29120 753 aa12.36□□□□□ -0.43
CHMP3-201ENST00000263856 CLCN2P51788 898 aa12.36□□□□□ -0.43
CHMP3-201ENST00000263856 LIPEQ05469 1076 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms