RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 LYSMD1Q96S90 227 aa18.34■□□□□ 0.53
SDF4-201ENST00000263741 FUT8Q9BYC5 575 aa18.34■□□□□ 0.53
SDF4-201ENST00000263741 CAAP1Q9H8G2 361 aa18.34■□□□□ 0.53
SDF4-201ENST00000263741 GOLGA6AQ9NYA3 693 aa18.34■□□□□ 0.53
SDF4-201ENST00000263741 LRP4O75096 1905 aa18.33■□□□□ 0.52
SDF4-201ENST00000263741 CCDC188H7C350 402 aa18.33■□□□□ 0.52
SDF4-201ENST00000263741 K7ESM1 405 aa18.33■□□□□ 0.52
SDF4-201ENST00000263741 POLR3GO15318 223 aaPredicted RBP18.33■□□□□ 0.52
SDF4-201ENST00000263741 TTI1O43156 1089 aa18.33■□□□□ 0.52
SDF4-201ENST00000263741 MCM3P25205 808 aa18.33■□□□□ 0.52
SDF4-201ENST00000263741 NFKBIAP25963 317 aa18.33■□□□□ 0.52
SDF4-201ENST00000263741 STC1P52823 247 aa18.33■□□□□ 0.52
SDF4-201ENST00000263741 PLA2G15Q8NCC3 412 aa18.33■□□□□ 0.52
SDF4-201ENST00000263741 PPP1R2P1Q96PQ5 205 aa18.33■□□□□ 0.52
SDF4-201ENST00000263741 GPR63Q9BZJ6 419 aa18.33■□□□□ 0.52
SDF4-201ENST00000263741 ACBD3Q9H3P7 528 aa18.33■□□□□ 0.52
SDF4-201ENST00000263741 ANKZF1Q9H8Y5 726 aa18.33■□□□□ 0.52
SDF4-201ENST00000263741 PCYOX1Q9UHG3 505 aa18.33■□□□□ 0.52
SDF4-201ENST00000263741 FNDC3AQ9Y2H6 1198 aaKnown RBP18.33■□□□□ 0.52
SDF4-201ENST00000263741 PCDHGA5Q9Y5G8 931 aa18.33■□□□□ 0.52
SDF4-201ENST00000263741 PLXNB3Q9ULL4 1909 aa18.33■□□□□ 0.52
SDF4-201ENST00000263741 DMXL1Q9Y485 3027 aa18.33■□□□□ 0.52
SDF4-201ENST00000263741 PRAMEF26H0Y7S4 382 aa18.32■□□□□ 0.52
SDF4-201ENST00000263741 AKT2P31751 481 aa18.32■□□□□ 0.52
SDF4-201ENST00000263741 DR1Q01658 176 aa18.32■□□□□ 0.52
SDF4-201ENST00000263741 PTPRCAPQ14761 206 aa18.32■□□□□ 0.52
SDF4-201ENST00000263741 PLA2G2CQ5R387 149 aa18.32■□□□□ 0.52
SDF4-201ENST00000263741 ANKRD22Q5VYY1 191 aa18.32■□□□□ 0.52
SDF4-201ENST00000263741 MICALCLQ6ZW33 695 aa18.32■□□□□ 0.52
SDF4-201ENST00000263741 RUBCNQ92622 972 aa18.32■□□□□ 0.52
SDF4-201ENST00000263741 SCAMP4Q969E2 229 aa18.32■□□□□ 0.52
SDF4-201ENST00000263741 CENPTQ96BT3 561 aa18.32■□□□□ 0.52
SDF4-201ENST00000263741 NUS1Q96E22 293 aa18.32■□□□□ 0.52
SDF4-201ENST00000263741 ZFYVE1Q9HBF4 777 aa18.32■□□□□ 0.52
SDF4-201ENST00000263741 BPIFA1Q9NP55 256 aa18.32■□□□□ 0.52
SDF4-201ENST00000263741 ASIC3Q9UHC3 531 aa18.32■□□□□ 0.52
SDF4-201ENST00000263741 DMTF1Q9Y222 760 aa18.32■□□□□ 0.52
SDF4-201ENST00000263741 PTPRZ1P23471 2315 aaPredicted RBP18.32■□□□□ 0.52
SDF4-201ENST00000263741 A0A1B0GTW7 788 aa18.32■□□□□ 0.52
SDF4-201ENST00000263741 A0A1B0GVT2 93 aa18.32■□□□□ 0.52
SDF4-201ENST00000263741 GNSP15586 552 aa18.32■□□□□ 0.52
SDF4-201ENST00000263741 CKAP4Q07065 602 aaKnown RBP18.32■□□□□ 0.52
SDF4-201ENST00000263741 ALS2CLQ60I27 953 aa18.32■□□□□ 0.52
SDF4-201ENST00000263741 GLT6D1Q7Z4J2 308 aa18.32■□□□□ 0.52
SDF4-201ENST00000263741 PTAR1Q7Z6K3 402 aaPredicted RBP18.32■□□□□ 0.52
SDF4-201ENST00000263741 JAMLQ86YT9 394 aa18.32■□□□□ 0.52
SDF4-201ENST00000263741 OR2I1PQ8NGU4 316 aa18.32■□□□□ 0.52
SDF4-201ENST00000263741 DTD2Q96FN9 168 aa18.32■□□□□ 0.52
SDF4-201ENST00000263741 MAGEE1Q9HCI5 957 aa18.32■□□□□ 0.52
SDF4-201ENST00000263741 ARL5AQ9Y689 179 aa18.32■□□□□ 0.52
SDF4-201ENST00000263741 CABIN1Q9Y6J0 2220 aa18.32■□□□□ 0.52
SDF4-201ENST00000263741 CFAP54Q96N23 3096 aa18.31■□□□□ 0.52
SDF4-201ENST00000263741 CCDC78A2IDD5 438 aa18.31■□□□□ 0.52
SDF4-201ENST00000263741 GFRA3O60609 400 aa18.31■□□□□ 0.52
SDF4-201ENST00000263741 ZNF30P17039 623 aa18.31■□□□□ 0.52
SDF4-201ENST00000263741 AFF3P51826 1226 aaKnown RBP18.31■□□□□ 0.52
SDF4-201ENST00000263741 RACK1P63244 317 aaKnown RBP18.31■□□□□ 0.52
SDF4-201ENST00000263741 IRX4P78413 519 aa18.31■□□□□ 0.52
SDF4-201ENST00000263741 BNC1Q01954 994 aa18.31■□□□□ 0.52
SDF4-201ENST00000263741 LRRC14Q15048 493 aa18.31■□□□□ 0.52
SDF4-201ENST00000263741 PPP1R21Q6ZMI0 780 aa18.31■□□□□ 0.52
SDF4-201ENST00000263741 TTC30BQ8N4P2 665 aa18.31■□□□□ 0.52
SDF4-201ENST00000263741 OR13H1Q8NG92 308 aa18.31■□□□□ 0.52
SDF4-201ENST00000263741 BMFQ96LC9 184 aa18.31■□□□□ 0.52
SDF4-201ENST00000263741 RXFP3Q9NSD7 469 aa18.31■□□□□ 0.52
SDF4-201ENST00000263741 KCTD3Q9Y597 815 aa18.31■□□□□ 0.52
SDF4-201ENST00000263741 A0A1W2PR77 199 aa18.3■□□□□ 0.52
SDF4-201ENST00000263741 MAP2K7O14733 419 aa18.3■□□□□ 0.52
SDF4-201ENST00000263741 TMEM63AO94886 807 aa18.3■□□□□ 0.52
SDF4-201ENST00000263741 CD38P28907 300 aa18.3■□□□□ 0.52
SDF4-201ENST00000263741 PTK6Q13882 451 aa18.3■□□□□ 0.52
SDF4-201ENST00000263741 STAT4Q14765 748 aa18.3■□□□□ 0.52
SDF4-201ENST00000263741 POU6F1Q14863 301 aa18.3■□□□□ 0.52
SDF4-201ENST00000263741 DUOXA1Q1HG43 343 aa18.3■□□□□ 0.52
SDF4-201ENST00000263741 TPRG1LQ5T0D9 272 aa18.3■□□□□ 0.52
SDF4-201ENST00000263741 TECPR1Q7Z6L1 1165 aa18.3■□□□□ 0.52
SDF4-201ENST00000263741 CBARPQ8N350 705 aaPredicted RBP18.3■□□□□ 0.52
SDF4-201ENST00000263741 CPT1BQ92523 772 aa18.3■□□□□ 0.52
SDF4-201ENST00000263741 SLCO2A1Q92959 643 aa18.3■□□□□ 0.52
SDF4-201ENST00000263741 TRIM31Q9BZY9 425 aa18.3■□□□□ 0.52
SDF4-201ENST00000263741 SEMA4GQ9NTN9 838 aa18.3■□□□□ 0.52
SDF4-201ENST00000263741 SUSD2Q9UGT4 822 aa18.3■□□□□ 0.52
SDF4-201ENST00000263741 OR1A2Q9Y585 309 aa18.3■□□□□ 0.52
SDF4-201ENST00000263741 ERICH4A6NGS2 130 aa18.3■□□□□ 0.52
SDF4-201ENST00000263741 GOLGA8MH3BSY2 632 aa18.3■□□□□ 0.52
SDF4-201ENST00000263741 PSMD11O00231 422 aa18.3■□□□□ 0.52
SDF4-201ENST00000263741 SUN1O94901 812 aa18.3■□□□□ 0.52
SDF4-201ENST00000263741 MSLNQ13421 630 aaPredicted RBP18.3■□□□□ 0.52
SDF4-201ENST00000263741 SEPT6Q14141 434 aa18.3■□□□□ 0.52
SDF4-201ENST00000263741 KCNJ11Q14654 390 aa18.3■□□□□ 0.52
SDF4-201ENST00000263741 SLC22A18ASQ8N1D0 253 aa18.3■□□□□ 0.52
SDF4-201ENST00000263741 DNAAF3Q8N9W5 541 aa18.3■□□□□ 0.52
SDF4-201ENST00000263741 AGAP2Q99490 1192 aa18.3■□□□□ 0.52
SDF4-201ENST00000263741 C1QTNF7Q9BXJ2 289 aa18.3■□□□□ 0.52
SDF4-201ENST00000263741 ABCG8Q9H221 673 aa18.3■□□□□ 0.52
SDF4-201ENST00000263741 CAPN10Q9HC96 672 aa18.3■□□□□ 0.52
SDF4-201ENST00000263741 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.3■□□□□ 0.52
SDF4-201ENST00000263741 TPX2Q9ULW0 747 aaKnown RBP18.3■□□□□ 0.52
SDF4-201ENST00000263741 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.29■□□□□ 0.52
SDF4-201ENST00000263741 LNP1A1A4G5 178 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms