RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 IGFBP5P24593 272 aa12.06□□□□□ -0.48
SMG6-201ENST00000263073 MC4RP32245 332 aa12.06□□□□□ -0.48
SMG6-201ENST00000263073 GJA8P48165 433 aa12.06□□□□□ -0.48
SMG6-201ENST00000263073 ANKRD46Q86W74 232 aa12.06□□□□□ -0.48
SMG6-201ENST00000263073 CLYBLQ8N0X4 340 aa12.06□□□□□ -0.48
SMG6-201ENST00000263073 PMM1Q92871 262 aa12.06□□□□□ -0.48
SMG6-201ENST00000263073 hCG_2039718K7EN88 272 aa12.06□□□□□ -0.48
SMG6-201ENST00000263073 UBA1P22314 1058 aaKnown RBP12.06□□□□□ -0.48
SMG6-201ENST00000263073 MYL9P24844 172 aa12.06□□□□□ -0.48
SMG6-201ENST00000263073 DPYSQ14117 519 aa12.06□□□□□ -0.48
SMG6-201ENST00000263073 INSCQ1MX18 579 aa12.06□□□□□ -0.48
SMG6-201ENST00000263073 SLC9A4Q6AI14 798 aa12.06□□□□□ -0.48
SMG6-201ENST00000263073 TRIM40Q6P9F5 258 aa12.06□□□□□ -0.48
SMG6-201ENST00000263073 ZNF662Q6ZS27 426 aa12.06□□□□□ -0.48
SMG6-201ENST00000263073 PPP3R2Q96LZ3 170 aa12.06□□□□□ -0.48
SMG6-201ENST00000263073 CNPPD1Q9BV87 410 aa12.06□□□□□ -0.48
SMG6-201ENST00000263073 SP140LQ9H930 580 aa12.06□□□□□ -0.48
SMG6-201ENST00000263073 PCDH18Q9HCL0 1135 aa12.06□□□□□ -0.48
SMG6-201ENST00000263073 FBXO10Q9UK96 956 aa12.06□□□□□ -0.48
SMG6-201ENST00000263073 COQ6Q9Y2Z9 468 aa12.06□□□□□ -0.48
SMG6-201ENST00000263073 ACADMP11310 421 aa12.06□□□□□ -0.48
SMG6-201ENST00000263073 IL1R1P14778 569 aa12.06□□□□□ -0.48
SMG6-201ENST00000263073 IDO1P14902 403 aa12.06□□□□□ -0.48
SMG6-201ENST00000263073 IDH3AP50213 366 aa12.06□□□□□ -0.48
SMG6-201ENST00000263073 SFSWAPQ12872 951 aaKnown RBP12.06□□□□□ -0.48
SMG6-201ENST00000263073 TMEM214Q6NUQ4 689 aaKnown RBP12.06□□□□□ -0.48
SMG6-201ENST00000263073 PIWIL4Q7Z3Z4 852 aaKnown RBP12.06□□□□□ -0.48
SMG6-201ENST00000263073 CHPFQ8IZ52 775 aa12.06□□□□□ -0.48
SMG6-201ENST00000263073 S100A13Q99584 98 aa12.06□□□□□ -0.48
SMG6-201ENST00000263073 BHLHE41Q9C0J9 482 aaPredicted RBP12.06□□□□□ -0.48
SMG6-201ENST00000263073 INTS7Q9NVH2 962 aaKnown RBP12.06□□□□□ -0.48
SMG6-201ENST00000263073 UXTQ9UBK9 157 aaPredicted RBP12.06□□□□□ -0.48
SMG6-201ENST00000263073 ITSN1Q15811 1721 aa12.05□□□□□ -0.48
SMG6-201ENST00000263073 FAM172BPA6NC97 362 aa12.05□□□□□ -0.48
SMG6-201ENST00000263073 SUV39H1O43463 412 aa12.05□□□□□ -0.48
SMG6-201ENST00000263073 METTL18O95568 372 aa12.05□□□□□ -0.48
SMG6-201ENST00000263073 ADORA2AP29274 412 aa12.05□□□□□ -0.48
SMG6-201ENST00000263073 OMPP47874 163 aa12.05□□□□□ -0.48
SMG6-201ENST00000263073 SGCGQ13326 291 aa12.05□□□□□ -0.48
SMG6-201ENST00000263073 CA9Q16790 459 aa12.05□□□□□ -0.48
SMG6-201ENST00000263073 CCSAPQ6IQ19 270 aaPredicted RBP12.05□□□□□ -0.48
SMG6-201ENST00000263073 DNERQ8NFT8 737 aa12.05□□□□□ -0.48
SMG6-201ENST00000263073 ATL1Q8WXF7 558 aa12.05□□□□□ -0.48
SMG6-201ENST00000263073 ESAMQ96AP7 390 aa12.05□□□□□ -0.48
SMG6-201ENST00000263073 SLC38A2Q96QD8 506 aa12.05□□□□□ -0.48
SMG6-201ENST00000263073 ELOVL4Q9GZR5 314 aa12.05□□□□□ -0.48
SMG6-201ENST00000263073 OAS3Q9Y6K5 1087 aaKnown RBP12.05□□□□□ -0.48
SMG6-201ENST00000263073 JCADQ9P266 1359 aa12.05□□□□□ -0.48
SMG6-201ENST00000263073 NFASCO94856 1347 aa12.05□□□□□ -0.48
SMG6-201ENST00000263073 TPTEP56180 551 aa12.05□□□□□ -0.48
SMG6-201ENST00000263073 GBE1Q04446 702 aa12.05□□□□□ -0.48
SMG6-201ENST00000263073 NFE2Q16621 373 aaPredicted RBP12.05□□□□□ -0.48
SMG6-201ENST00000263073 CYP2A13Q16696 494 aa12.05□□□□□ -0.48
SMG6-201ENST00000263073 LSM12Q3MHD2 195 aaKnown RBP12.05□□□□□ -0.48
SMG6-201ENST00000263073 PYROXD2Q8N2H3 581 aa12.05□□□□□ -0.48
SMG6-201ENST00000263073 DIRAS2Q96HU8 199 aa12.05□□□□□ -0.48
SMG6-201ENST00000263073 MYOCQ99972 504 aa12.05□□□□□ -0.48
SMG6-201ENST00000263073 PCDHAC1Q9H158 963 aa12.05□□□□□ -0.48
SMG6-201ENST00000263073 GOLGA2P5Q9HBQ8 144 aa12.05□□□□□ -0.48
SMG6-201ENST00000263073 ZNF490Q9ULM2 529 aaPredicted RBP12.05□□□□□ -0.48
SMG6-201ENST00000263073 PCDHGA3Q9Y5H0 932 aa12.05□□□□□ -0.48
SMG6-201ENST00000263073 SNX10Q9Y5X0 201 aa12.05□□□□□ -0.48
SMG6-201ENST00000263073 SLC28A1O00337 649 aa12.05□□□□□ -0.48
SMG6-201ENST00000263073 MFSD11O43934 449 aa12.05□□□□□ -0.48
SMG6-201ENST00000263073 TBL1XO60907 577 aa12.05□□□□□ -0.48
SMG6-201ENST00000263073 ATF4P18848 351 aaPredicted RBP12.05□□□□□ -0.48
SMG6-201ENST00000263073 POLR2JP52435 117 aaKnown RBP12.05□□□□□ -0.48
SMG6-201ENST00000263073 PPP2R2BQ00005 443 aa12.05□□□□□ -0.48
SMG6-201ENST00000263073 ARL13AQ5H913 290 aaPredicted RBP12.05□□□□□ -0.48
SMG6-201ENST00000263073 C6orf183Q5T699 404 aa12.05□□□□□ -0.48
SMG6-201ENST00000263073 AFTPHQ6ULP2 937 aa12.05□□□□□ -0.48
SMG6-201ENST00000263073 DEPDC4Q8N2C3 294 aa12.05□□□□□ -0.48
SMG6-201ENST00000263073 ADCY4Q8NFM4 1077 aa12.05□□□□□ -0.48
SMG6-201ENST00000263073 OR4L1Q8NH43 312 aa12.05□□□□□ -0.48
SMG6-201ENST00000263073 ITCHQ96J02 903 aa12.05□□□□□ -0.48
SMG6-201ENST00000263073 CPXM1Q96SM3 734 aa12.05□□□□□ -0.48
SMG6-201ENST00000263073 ACO2Q99798 780 aaKnown RBP12.05□□□□□ -0.48
SMG6-201ENST00000263073 ATG10Q9H0Y0 220 aa12.05□□□□□ -0.48
SMG6-201ENST00000263073 CNTNAP4Q9C0A0 1308 aa12.05□□□□□ -0.48
SMG6-201ENST00000263073 MROH2AA6NES4 1674 aa12.05□□□□□ -0.48
SMG6-201ENST00000263073 FFAR2O15552 330 aa12.05□□□□□ -0.48
SMG6-201ENST00000263073 AMHP03971 560 aa12.05□□□□□ -0.48
SMG6-201ENST00000263073 CCNYL3P0C7X3 344 aa12.05□□□□□ -0.48
SMG6-201ENST00000263073 GDF10P55107 478 aa12.05□□□□□ -0.48
SMG6-201ENST00000263073 ACSBG2Q5FVE4 666 aa12.05□□□□□ -0.48
SMG6-201ENST00000263073 INTS11Q5TA45 600 aaKnown RBP12.05□□□□□ -0.48
SMG6-201ENST00000263073 LRRC38Q5VT99 294 aa12.05□□□□□ -0.48
SMG6-201ENST00000263073 APOBEC3HQ6NTF7 200 aaKnown RBP12.05□□□□□ -0.48
SMG6-201ENST00000263073 TBC1D21Q8IYX1 336 aa12.05□□□□□ -0.48
SMG6-201ENST00000263073 TEX47Q8TBZ9 253 aa12.05□□□□□ -0.48
SMG6-201ENST00000263073 TWIST2Q8WVJ9 160 aa12.05□□□□□ -0.48
SMG6-201ENST00000263073 TUBGCP5Q96RT8 1024 aa12.05□□□□□ -0.48
SMG6-201ENST00000263073 TDRD1Q9BXT4 1180 aaKnown RBP12.05□□□□□ -0.48
SMG6-201ENST00000263073 CXorf21Q9HAI6 301 aa12.05□□□□□ -0.48
SMG6-201ENST00000263073 RAB23Q9ULC3 237 aa12.05□□□□□ -0.48
SMG6-201ENST00000263073 VWA7Q9Y334 891 aa12.05□□□□□ -0.48
SMG6-201ENST00000263073 MGRN1O60291 552 aa12.05□□□□□ -0.48
SMG6-201ENST00000263073 LGALS2P05162 132 aa12.05□□□□□ -0.48
SMG6-201ENST00000263073 COL6A1P12109 1028 aa12.05□□□□□ -0.48
SMG6-201ENST00000263073 FOXN2P32314 431 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms