RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 SLC10A3P09131 477 aa12.99□□□□□ -0.33
SNX1-201ENST00000261889 ATP5F1P24539 256 aaPredicted RBP12.99□□□□□ -0.33
SNX1-201ENST00000261889 CCR1P32246 355 aa12.99□□□□□ -0.33
SNX1-201ENST00000261889 ARCN1P48444 511 aaKnown RBP12.99□□□□□ -0.33
SNX1-201ENST00000261889 TAF6P49848 677 aa12.99□□□□□ -0.33
SNX1-201ENST00000261889 TXNL4AP83876 142 aaKnown RBP12.99□□□□□ -0.33
SNX1-201ENST00000261889 BEX3Q00994 111 aa12.99□□□□□ -0.33
SNX1-201ENST00000261889 ACAP2Q15057 778 aa12.99□□□□□ -0.33
SNX1-201ENST00000261889 PAFAH1B3Q15102 231 aaKnown RBP12.99□□□□□ -0.33
SNX1-201ENST00000261889 C18orf21Q32NC0 220 aaPredicted RBP12.99□□□□□ -0.33
SNX1-201ENST00000261889 NAPEPLDQ6IQ20 393 aa12.99□□□□□ -0.33
SNX1-201ENST00000261889 CPSF7Q8N684 471 aaKnown RBP12.99□□□□□ -0.33
SNX1-201ENST00000261889 TBATAQ96M53 351 aa12.99□□□□□ -0.33
SNX1-201ENST00000261889 GAD1Q99259 594 aa12.99□□□□□ -0.33
SNX1-201ENST00000261889 MYOCQ99972 504 aa12.99□□□□□ -0.33
SNX1-201ENST00000261889 C16orf70Q9BSU1 422 aa12.99□□□□□ -0.33
SNX1-201ENST00000261889 ALG2Q9H553 416 aa12.99□□□□□ -0.33
SNX1-201ENST00000261889 VPS51Q9UID3 782 aa12.99□□□□□ -0.33
SNX1-201ENST00000261889 BLOC1S6Q9UL45 172 aa12.99□□□□□ -0.33
SNX1-201ENST00000261889 COQ6Q9Y2Z9 468 aa12.99□□□□□ -0.33
SNX1-201ENST00000261889 ARL5AQ9Y689 179 aa12.99□□□□□ -0.33
SNX1-201ENST00000261889 SHMT2P34897 504 aa12.98□□□□□ -0.33
SNX1-201ENST00000261889 NKX2-5P52952 324 aaPredicted RBP12.98□□□□□ -0.33
SNX1-201ENST00000261889 UFM1P61960 85 aa12.98□□□□□ -0.33
SNX1-201ENST00000261889 NFYCQ13952 458 aa12.98□□□□□ -0.33
SNX1-201ENST00000261889 DGCR6Q14129 220 aa12.98□□□□□ -0.33
SNX1-201ENST00000261889 PGS1Q32NB8 556 aa12.98□□□□□ -0.33
SNX1-201ENST00000261889 PPHLN1Q8NEY8 458 aaKnown RBP12.98□□□□□ -0.33
SNX1-201ENST00000261889 PLEKHA8Q96JA3 519 aa12.98□□□□□ -0.33
SNX1-201ENST00000261889 ASB1Q9Y576 335 aa12.98□□□□□ -0.33
SNX1-201ENST00000261889 TMEM247A6NEH6 219 aa12.98□□□□□ -0.33
SNX1-201ENST00000261889 A6NL46 340 aa12.98□□□□□ -0.33
SNX1-201ENST00000261889 TRPC5OSA6NMA1 111 aa12.98□□□□□ -0.33
SNX1-201ENST00000261889 BMP1P13497 986 aa12.98□□□□□ -0.33
SNX1-201ENST00000261889 CYP4B1P13584 511 aa12.98□□□□□ -0.33
SNX1-201ENST00000261889 AGXTP21549 392 aa12.98□□□□□ -0.33
SNX1-201ENST00000261889 BRCC3P46736 316 aa12.98□□□□□ -0.33
SNX1-201ENST00000261889 CLCNKBP51801 687 aa12.98□□□□□ -0.33
SNX1-201ENST00000261889 DGKQP52824 942 aa12.98□□□□□ -0.33
SNX1-201ENST00000261889 UGT3A1Q6NUS8 523 aa12.98□□□□□ -0.33
SNX1-201ENST00000261889 SLC27A1Q6PCB7 646 aa12.98□□□□□ -0.33
SNX1-201ENST00000261889 CYS1Q717R9 158 aa12.98□□□□□ -0.33
SNX1-201ENST00000261889 STK32CQ86UX6 486 aa12.98□□□□□ -0.33
SNX1-201ENST00000261889 EXOC8Q8IYI6 725 aa12.98□□□□□ -0.33
SNX1-201ENST00000261889 OR13C4Q8NGS5 318 aa12.98□□□□□ -0.33
SNX1-201ENST00000261889 FBXO30Q8TB52 745 aa12.98□□□□□ -0.33
SNX1-201ENST00000261889 RHNO1Q9BSD3 238 aa12.98□□□□□ -0.33
SNX1-201ENST00000261889 ING2Q9H160 280 aa12.98□□□□□ -0.33
SNX1-201ENST00000261889 TUBB1Q9H4B7 451 aa12.98□□□□□ -0.33
SNX1-201ENST00000261889 ITM2CQ9NQX7 267 aa12.98□□□□□ -0.33
SNX1-201ENST00000261889 BCAP29Q9UHQ4 241 aa12.98□□□□□ -0.33
SNX1-201ENST00000261889 IKZF3Q9UKT9 509 aa12.98□□□□□ -0.33
SNX1-201ENST00000261889 TREHO43280 583 aa12.98□□□□□ -0.33
SNX1-201ENST00000261889 DAB1O75553 588 aa12.98□□□□□ -0.33
SNX1-201ENST00000261889 TBX18O95935 607 aa12.98□□□□□ -0.33
SNX1-201ENST00000261889 C8BP07358 591 aa12.98□□□□□ -0.33
SNX1-201ENST00000261889 IMPDH2P12268 514 aa12.98□□□□□ -0.33
SNX1-201ENST00000261889 TPD52P55327 224 aaPredicted RBP12.98□□□□□ -0.33
SNX1-201ENST00000261889 WNT3AP56704 352 aa12.98□□□□□ -0.33
SNX1-201ENST00000261889 YWHAHQ04917 246 aaPredicted RBP12.98□□□□□ -0.33
SNX1-201ENST00000261889 SELPLGQ14242 412 aa12.98□□□□□ -0.33
SNX1-201ENST00000261889 TECRLQ5HYJ1 363 aa12.98□□□□□ -0.33
SNX1-201ENST00000261889 HECTD2Q5U5R9 776 aa12.98□□□□□ -0.33
SNX1-201ENST00000261889 SLC2A7Q6PXP3 512 aa12.98□□□□□ -0.33
SNX1-201ENST00000261889 C4orf22Q6V702 233 aa12.98□□□□□ -0.33
SNX1-201ENST00000261889 SLC7A5P1Q8MH63 180 aa12.98□□□□□ -0.33
SNX1-201ENST00000261889 TBC1D15Q8TC07 691 aa12.98□□□□□ -0.33
SNX1-201ENST00000261889 GSTO2Q9H4Y5 243 aa12.98□□□□□ -0.33
SNX1-201ENST00000261889 SUCOQ9UBS9 1254 aaKnown RBP12.98□□□□□ -0.33
SNX1-201ENST00000261889 PNMA8BQ9ULN7 279 aaPredicted RBP12.98□□□□□ -0.33
SNX1-201ENST00000261889 SH3GLB1Q9Y371 365 aa12.98□□□□□ -0.33
SNX1-201ENST00000261889 TCRBV3S1A0A5B6 114 aa12.97□□□□□ -0.33
SNX1-201ENST00000261889 SYNCRIPO60506 623 aaKnown RBP12.97□□□□□ -0.33
SNX1-201ENST00000261889 KATNA1O75449 491 aa12.97□□□□□ -0.33
SNX1-201ENST00000261889 NFKBIAP25963 317 aa12.97□□□□□ -0.33
SNX1-201ENST00000261889 EIF2B2P49770 351 aaKnown RBP12.97□□□□□ -0.33
SNX1-201ENST00000261889 OR4D2P58180 307 aa12.97□□□□□ -0.33
SNX1-201ENST00000261889 DAOAP59103 153 aa12.97□□□□□ -0.33
SNX1-201ENST00000261889 SLC10A7Q0GE19 358 aa12.97□□□□□ -0.33
SNX1-201ENST00000261889 OR4D1Q15615 310 aa12.97□□□□□ -0.33
SNX1-201ENST00000261889 SAMD4BQ5PRF9 694 aaKnown RBP12.97□□□□□ -0.33
SNX1-201ENST00000261889 ERMP1Q7Z2K6 904 aa12.97□□□□□ -0.33
SNX1-201ENST00000261889 CLEC4FQ8N1N0 589 aa12.97□□□□□ -0.33
SNX1-201ENST00000261889 BBS5Q8N3I7 341 aa12.97□□□□□ -0.33
SNX1-201ENST00000261889 C2orf69Q8N8R5 385 aa12.97□□□□□ -0.33
SNX1-201ENST00000261889 TWIST2Q8WVJ9 160 aa12.97□□□□□ -0.33
SNX1-201ENST00000261889 MRPL57Q9BQC6 102 aaKnown RBP12.97□□□□□ -0.33
SNX1-201ENST00000261889 EFHD1Q9BUP0 239 aa12.97□□□□□ -0.33
SNX1-201ENST00000261889 HERC2P3Q9BVR0 1158 aa12.97□□□□□ -0.33
SNX1-201ENST00000261889 CD300AQ9UGN4 299 aa12.97□□□□□ -0.33
SNX1-201ENST00000261889 SH3PXD2BA1X283 911 aa12.97□□□□□ -0.33
SNX1-201ENST00000261889 POMCP01189 267 aa12.97□□□□□ -0.33
SNX1-201ENST00000261889 CYP2C9P11712 490 aa12.97□□□□□ -0.33
SNX1-201ENST00000261889 FASP25445 335 aa12.97□□□□□ -0.33
SNX1-201ENST00000261889 PSMA4P25789 261 aaKnown RBP12.97□□□□□ -0.33
SNX1-201ENST00000261889 CDKN1CP49918 316 aaPredicted RBP12.97□□□□□ -0.33
SNX1-201ENST00000261889 SQLEQ14534 574 aa12.97□□□□□ -0.33
SNX1-201ENST00000261889 PCID2Q5JVF3 399 aa12.97□□□□□ -0.33
SNX1-201ENST00000261889 PIWIL4Q7Z3Z4 852 aaKnown RBP12.97□□□□□ -0.33
SNX1-201ENST00000261889 Q8N9G6 341 aaPredicted RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms