RNA–Protein interactions for RNA: ENST00000261789.8

TM9SF1-201, Transcript of transmembrane 9 superfamily member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-201ENST00000261789 SLC2A3P11169 496 aa16.36■□□□□ 0.21
TM9SF1-201ENST00000261789 AKR1A1P14550 325 aa16.36■□□□□ 0.21
TM9SF1-201ENST00000261789 SLC7A1P30825 629 aa16.36■□□□□ 0.21
TM9SF1-201ENST00000261789 LAMB3Q13751 1172 aa16.36■□□□□ 0.21
TM9SF1-201ENST00000261789 SAMD4BQ5PRF9 694 aaKnown RBP16.36■□□□□ 0.21
TM9SF1-201ENST00000261789 C8orf82Q6P1X6 216 aaPredicted RBP16.36■□□□□ 0.21
TM9SF1-201ENST00000261789 TRPC4APQ8TEL6 797 aa16.36■□□□□ 0.21
TM9SF1-201ENST00000261789 L3HYPDHQ96EM0 354 aa16.36■□□□□ 0.21
TM9SF1-201ENST00000261789 C1orf74Q96LT6 269 aa16.36■□□□□ 0.21
TM9SF1-201ENST00000261789 TUBB1Q9H4B7 451 aa16.36■□□□□ 0.21
TM9SF1-201ENST00000261789 Q9Y3F1 56 aa16.36■□□□□ 0.21
TM9SF1-201ENST00000261789 CROCCQ5TZA2 2017 aa16.35■□□□□ 0.21
TM9SF1-201ENST00000261789 SAC3D1A6NKF1 404 aa16.35■□□□□ 0.21
TM9SF1-201ENST00000261789 WASH4PA8MWX3 477 aa16.35■□□□□ 0.21
TM9SF1-201ENST00000261789 NME4O00746 187 aa16.35■□□□□ 0.21
TM9SF1-201ENST00000261789 MTHFD2P13995 350 aa16.35■□□□□ 0.21
TM9SF1-201ENST00000261789 CAPN3P20807 821 aa16.35■□□□□ 0.21
TM9SF1-201ENST00000261789 APLP1P51693 650 aa16.35■□□□□ 0.21
TM9SF1-201ENST00000261789 NDST2P52849 883 aa16.35■□□□□ 0.21
TM9SF1-201ENST00000261789 STX1BP61266 288 aa16.35■□□□□ 0.21
TM9SF1-201ENST00000261789 GALNT1Q10472 559 aaPredicted RBP16.35■□□□□ 0.21
TM9SF1-201ENST00000261789 FAM45BPQ6NSW5 357 aa16.35■□□□□ 0.21
TM9SF1-201ENST00000261789 B3GNT6Q6ZMB0 384 aa16.35■□□□□ 0.21
TM9SF1-201ENST00000261789 SPPL2CQ8IUH8 684 aa16.35■□□□□ 0.21
TM9SF1-201ENST00000261789 CLYBLQ8N0X4 340 aa16.35■□□□□ 0.21
TM9SF1-201ENST00000261789 FAM45AQ8TCE6 357 aa16.35■□□□□ 0.21
TM9SF1-201ENST00000261789 TWIST2Q8WVJ9 160 aa16.35■□□□□ 0.21
TM9SF1-201ENST00000261789 SMIM14Q96QK8 99 aa16.35■□□□□ 0.21
TM9SF1-201ENST00000261789 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.35■□□□□ 0.216e-6■□□□□ 8.3
TM9SF1-201ENST00000261789 FAM50BQ9Y247 325 aa16.35■□□□□ 0.21
TM9SF1-201ENST00000261789 PDLIM1O00151 329 aa16.35■□□□□ 0.21
TM9SF1-201ENST00000261789 CD3EAPO15446 510 aaKnown RBP16.35■□□□□ 0.21
TM9SF1-201ENST00000261789 PAPSS2O95340 614 aaPredicted RBP16.35■□□□□ 0.21
TM9SF1-201ENST00000261789 GLP2RO95838 553 aa16.35■□□□□ 0.21
TM9SF1-201ENST00000261789 RHOQP17081 205 aa16.35■□□□□ 0.21
TM9SF1-201ENST00000261789 RPS6KA3P51812 740 aa16.35■□□□□ 0.21
TM9SF1-201ENST00000261789 CDH15P55291 814 aa16.35■□□□□ 0.21
TM9SF1-201ENST00000261789 TRAP1Q12931 704 aaKnown RBP16.35■□□□□ 0.21
TM9SF1-201ENST00000261789 MAP7Q14244 749 aa16.35■□□□□ 0.21
TM9SF1-201ENST00000261789 LPIN1Q14693 890 aa16.35■□□□□ 0.21
TM9SF1-201ENST00000261789 POLD3Q15054 466 aaPredicted RBP16.35■□□□□ 0.21
TM9SF1-201ENST00000261789 MAP7D1Q3KQU3 841 aa16.35■□□□□ 0.21
TM9SF1-201ENST00000261789 ZBTB49Q6ZSB9 765 aa16.35■□□□□ 0.21
TM9SF1-201ENST00000261789 MON1AQ86VX9 555 aa16.35■□□□□ 0.21
TM9SF1-201ENST00000261789 LRRC49Q8IUZ0 686 aa16.35■□□□□ 0.21
TM9SF1-201ENST00000261789 ATAD1Q8NBU5 361 aa16.35■□□□□ 0.21
TM9SF1-201ENST00000261789 B3GALT6Q96L58 329 aa16.35■□□□□ 0.21
TM9SF1-201ENST00000261789 TMEM248Q9NWD8 314 aa16.35■□□□□ 0.21
TM9SF1-201ENST00000261789 PTTG2Q9NZH5 202 aa16.35■□□□□ 0.21
TM9SF1-201ENST00000261789 CNOT11Q9UKZ1 510 aaKnown RBP16.35■□□□□ 0.21
TM9SF1-201ENST00000261789 PATJQ8NI35 1801 aa16.34■□□□□ 0.21
TM9SF1-201ENST00000261789 SCN10AQ9Y5Y9 1956 aa16.34■□□□□ 0.21
TM9SF1-201ENST00000261789 LOC285095A0A1B0GVY8 99 aa16.34■□□□□ 0.21
TM9SF1-201ENST00000261789 DUSP11O75319 330 aaKnown RBP16.34■□□□□ 0.21
TM9SF1-201ENST00000261789 ASLP04424 464 aa16.34■□□□□ 0.21
TM9SF1-201ENST00000261789 FDXRP22570 491 aa16.34■□□□□ 0.21
TM9SF1-201ENST00000261789 NUP93Q8N1F7 819 aa16.34■□□□□ 0.21
TM9SF1-201ENST00000261789 CFAP52Q8N1V2 620 aa16.34■□□□□ 0.21
TM9SF1-201ENST00000261789 C2orf69Q8N8R5 385 aa16.34■□□□□ 0.21
TM9SF1-201ENST00000261789 TSPAN14Q8NG11 270 aa16.34■□□□□ 0.21
TM9SF1-201ENST00000261789 RPRD1AQ96P16 312 aaPredicted RBP16.34■□□□□ 0.21
TM9SF1-201ENST00000261789 SEMA4BQ9NPR2 832 aaPredicted RBP16.34■□□□□ 0.21
TM9SF1-201ENST00000261789 MRPL40Q9NQ50 206 aaKnown RBP16.34■□□□□ 0.21
TM9SF1-201ENST00000261789 IKZF3Q9UKT9 509 aa16.34■□□□□ 0.21
TM9SF1-201ENST00000261789 PRG3Q9Y2Y8 225 aaPredicted RBP16.34■□□□□ 0.21
TM9SF1-201ENST00000261789 ANKRD33BA6NCL7 494 aa16.34■□□□□ 0.21
TM9SF1-201ENST00000261789 HTRA2O43464 458 aaPredicted RBP16.34■□□□□ 0.21
TM9SF1-201ENST00000261789 GNAO1P09471 354 aa16.34■□□□□ 0.21
TM9SF1-201ENST00000261789 GFAPP14136 432 aa16.34■□□□□ 0.21
TM9SF1-201ENST00000261789 ZNF37AP17032 561 aaPredicted RBP16.34■□□□□ 0.21
TM9SF1-201ENST00000261789 CTGFP29279 349 aa16.34■□□□□ 0.21
TM9SF1-201ENST00000261789 PRKCQQ04759 706 aa16.34■□□□□ 0.21
TM9SF1-201ENST00000261789 USP41Q3LFD5 358 aa16.34■□□□□ 0.21
TM9SF1-201ENST00000261789 CARM1Q86X55 608 aa16.34■□□□□ 0.21
TM9SF1-201ENST00000261789 GABPB2Q8TAK5 448 aaPredicted RBP16.34■□□□□ 0.21
TM9SF1-201ENST00000261789 TOP1MTQ969P6 601 aa16.34■□□□□ 0.21
TM9SF1-201ENST00000261789 PBXIP1Q96AQ6 731 aa16.34■□□□□ 0.21
TM9SF1-201ENST00000261789 TUBGCP3Q96CW5 907 aa16.34■□□□□ 0.21
TM9SF1-201ENST00000261789 PHF12Q96QT6 1004 aa16.34■□□□□ 0.21
TM9SF1-201ENST00000261789 CCT7Q99832 543 aa16.34■□□□□ 0.21
TM9SF1-201ENST00000261789 TRMOQ9BU70 441 aa16.34■□□□□ 0.21
TM9SF1-201ENST00000261789 LIN28AQ9H9Z2 209 aaKnown RBP16.34■□□□□ 0.21
TM9SF1-201ENST00000261789 OLAHQ9NV23 265 aa16.34■□□□□ 0.21
TM9SF1-201ENST00000261789 DUS2Q9NX74 493 aaKnown RBP16.34■□□□□ 0.21
TM9SF1-201ENST00000261789 PLK2Q9NYY3 685 aa16.34■□□□□ 0.21
TM9SF1-201ENST00000261789 TIMM22Q9Y584 194 aa16.34■□□□□ 0.21
TM9SF1-201ENST00000261789 HEMK1Q9Y5R4 338 aaPredicted RBP16.34■□□□□ 0.21
TM9SF1-201ENST00000261789 UBA6A0AVT1 1052 aaPredicted RBP16.33■□□□□ 0.2
TM9SF1-201ENST00000261789 ARHGAP10A1A4S6 786 aa16.33■□□□□ 0.2
TM9SF1-201ENST00000261789 NCF1BA6NI72 391 aaPredicted RBP16.33■□□□□ 0.2
TM9SF1-201ENST00000261789 NCF1CA8MVU1 366 aaPredicted RBP16.33■□□□□ 0.2
TM9SF1-201ENST00000261789 NCF1P14598 390 aaPredicted RBP16.33■□□□□ 0.2
TM9SF1-201ENST00000261789 CES1P23141 567 aa16.33■□□□□ 0.2
TM9SF1-201ENST00000261789 OR1E1P30953 314 aa16.33■□□□□ 0.2
TM9SF1-201ENST00000261789 SLC5A2P31639 672 aa16.33■□□□□ 0.2
TM9SF1-201ENST00000261789 DIO3P55073 304 aa16.33■□□□□ 0.2
TM9SF1-201ENST00000261789 ARPP19P56211 112 aa16.33■□□□□ 0.2
TM9SF1-201ENST00000261789 NRG1Q02297 640 aaPredicted RBP16.33■□□□□ 0.2
TM9SF1-201ENST00000261789 MSANTD2Q6P1R3 559 aa16.33■□□□□ 0.2
TM9SF1-201ENST00000261789 TEX26Q8N6G2 289 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms