RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 ANKRD20A1Q5TYW2 823 aa16.79■□□□□ 0.28
SDCBP-201ENST00000260130 ANKRD20A3Q5VUR7 823 aa16.79■□□□□ 0.28
SDCBP-201ENST00000260130 KDELC2Q7Z4H8 507 aa16.79■□□□□ 0.28
SDCBP-201ENST00000260130 UBP1Q9NZI7 540 aa16.79■□□□□ 0.28
SDCBP-201ENST00000260130 DNPEPQ9ULA0 475 aa16.79■□□□□ 0.28
SDCBP-201ENST00000260130 ANKRD36A6QL64 1941 aa16.79■□□□□ 0.28
SDCBP-201ENST00000260130 PCDH15Q96QU1 1955 aa16.79■□□□□ 0.28
SDCBP-201ENST00000260130 TRPM6Q9BX84 2022 aa16.79■□□□□ 0.28
SDCBP-201ENST00000260130 CACNA1EQ15878 2313 aa16.78■□□□□ 0.28
SDCBP-201ENST00000260130 HMGB1P1B2RPK0 211 aaPredicted RBP16.78■□□□□ 0.28
SDCBP-201ENST00000260130 CEP104O60308 925 aa16.78■□□□□ 0.28
SDCBP-201ENST00000260130 PMPCBO75439 489 aa16.78■□□□□ 0.28
SDCBP-201ENST00000260130 CER1O95813 267 aa16.78■□□□□ 0.28
SDCBP-201ENST00000260130 THEGLP0DJG4 465 aa16.78■□□□□ 0.28
SDCBP-201ENST00000260130 NXPH1P58417 271 aa16.78■□□□□ 0.28
SDCBP-201ENST00000260130 LRRC14Q15048 493 aa16.78■□□□□ 0.28
SDCBP-201ENST00000260130 CNGA3Q16281 694 aa16.78■□□□□ 0.28
SDCBP-201ENST00000260130 PCSK7Q16549 785 aa16.78■□□□□ 0.28
SDCBP-201ENST00000260130 ITPRIPL1Q6GPH6 555 aa16.78■□□□□ 0.28
SDCBP-201ENST00000260130 SPATS2Q86XZ4 545 aaKnown RBP16.78■□□□□ 0.28
SDCBP-201ENST00000260130 KLHL7Q8IXQ5 586 aa16.78■□□□□ 0.28
SDCBP-201ENST00000260130 CBARPQ8N350 705 aaPredicted RBP16.78■□□□□ 0.28
SDCBP-201ENST00000260130 TP53I13Q8NBR0 393 aaPredicted RBP16.78■□□□□ 0.28
SDCBP-201ENST00000260130 ATG4AQ8WYN0 398 aa16.78■□□□□ 0.28
SDCBP-201ENST00000260130 RMDN1Q96DB5 314 aa16.78■□□□□ 0.28
SDCBP-201ENST00000260130 IFT43Q96FT9 208 aa16.78■□□□□ 0.28
SDCBP-201ENST00000260130 SMIM14Q96QK8 99 aa16.78■□□□□ 0.28
SDCBP-201ENST00000260130 TRIB3Q96RU7 358 aa16.78■□□□□ 0.28
SDCBP-201ENST00000260130 DNAAF2Q9NVR5 837 aaKnown RBP16.78■□□□□ 0.28
SDCBP-201ENST00000260130 FAM169AQ9Y6X4 670 aa16.78■□□□□ 0.28
SDCBP-201ENST00000260130 CCDC188H7C350 402 aa16.78■□□□□ 0.28
SDCBP-201ENST00000260130 PGRMC1O00264 195 aaKnown RBP16.78■□□□□ 0.28
SDCBP-201ENST00000260130 OPHN1O60890 802 aa16.78■□□□□ 0.28
SDCBP-201ENST00000260130 RECQL5O94762 991 aaPredicted RBP16.78■□□□□ 0.28
SDCBP-201ENST00000260130 FGGP02679 453 aa16.78■□□□□ 0.28
SDCBP-201ENST00000260130 LHCGRP22888 699 aa16.78■□□□□ 0.28
SDCBP-201ENST00000260130 ARHGEF7Q14155 803 aa16.78■□□□□ 0.28
SDCBP-201ENST00000260130 ACOX1Q15067 660 aa16.78■□□□□ 0.28
SDCBP-201ENST00000260130 QPCTQ16769 361 aa16.78■□□□□ 0.28
SDCBP-201ENST00000260130 LRIG3Q6UXM1 1119 aa16.78■□□□□ 0.28
SDCBP-201ENST00000260130 KYAT3Q6YP21 454 aaKnown RBP16.78■□□□□ 0.28
SDCBP-201ENST00000260130 Q6ZSR6 202 aa16.78■□□□□ 0.28
SDCBP-201ENST00000260130 OR13H1Q8NG92 308 aa16.78■□□□□ 0.28
SDCBP-201ENST00000260130 SPATA13Q96N96 652 aa16.78■□□□□ 0.28
SDCBP-201ENST00000260130 MLPHQ9BV36 600 aaPredicted RBP16.78■□□□□ 0.28
SDCBP-201ENST00000260130 IL21RQ9HBE5 538 aa16.78■□□□□ 0.28
SDCBP-201ENST00000260130 MBNL1Q9NR56 388 aaKnown RBP16.78■□□□□ 0.28
SDCBP-201ENST00000260130 C5orf60A6NFR6 353 aa16.77■□□□□ 0.28
SDCBP-201ENST00000260130 CAPN8A6NHC0 703 aa16.77■□□□□ 0.28
SDCBP-201ENST00000260130 GOLGA6L10A6NI86 522 aa16.77■□□□□ 0.28
SDCBP-201ENST00000260130 F5H423 210 aaPredicted RBP16.77■□□□□ 0.28
SDCBP-201ENST00000260130 SLC30A4O14863 429 aa16.77■□□□□ 0.28
SDCBP-201ENST00000260130 LIASO43766 372 aa16.77■□□□□ 0.28
SDCBP-201ENST00000260130 GALNT3Q14435 633 aa16.77■□□□□ 0.28
SDCBP-201ENST00000260130 ZNF423Q2M1K9 1284 aa16.77■□□□□ 0.28
SDCBP-201ENST00000260130 WSCD2Q2TBF2 565 aa16.77■□□□□ 0.28
SDCBP-201ENST00000260130 UAP1L1Q3KQV9 507 aa16.77■□□□□ 0.28
SDCBP-201ENST00000260130 KCTD16Q68DU8 428 aa16.77■□□□□ 0.28
SDCBP-201ENST00000260130 CRTC1Q6UUV9 634 aa16.77■□□□□ 0.28
SDCBP-201ENST00000260130 TSPAN33Q86UF1 283 aa16.77■□□□□ 0.28
SDCBP-201ENST00000260130 FAM71DQ8N9W8 422 aa16.77■□□□□ 0.28
SDCBP-201ENST00000260130 CCDC110Q8TBZ0 833 aa16.77■□□□□ 0.28
SDCBP-201ENST00000260130 MAIP1Q8WWC4 291 aa16.77■□□□□ 0.28
SDCBP-201ENST00000260130 LRRC45Q96CN5 670 aa16.77■□□□□ 0.28
SDCBP-201ENST00000260130 OXNAD1Q96HP4 312 aaPredicted RBP16.77■□□□□ 0.28
SDCBP-201ENST00000260130 ATP6V1G3Q96LB4 118 aa16.77■□□□□ 0.28
SDCBP-201ENST00000260130 LYSMD1Q96S90 227 aa16.77■□□□□ 0.28
SDCBP-201ENST00000260130 TMEM121Q9BTD3 319 aa16.77■□□□□ 0.28
SDCBP-201ENST00000260130 GBA3Q9H227 469 aa16.77■□□□□ 0.28
SDCBP-201ENST00000260130 DOCK9Q9BZ29 2069 aa16.77■□□□□ 0.27
SDCBP-201ENST00000260130 ANKRD65E5RJM6 399 aa16.77■□□□□ 0.27
SDCBP-201ENST00000260130 PSMD11O00231 422 aa16.77■□□□□ 0.27
SDCBP-201ENST00000260130 NDUFAB1O14561 156 aa16.77■□□□□ 0.27
SDCBP-201ENST00000260130 DFNA5O60443 496 aa16.77■□□□□ 0.27
SDCBP-201ENST00000260130 GM2AP17900 193 aa16.77■□□□□ 0.27
SDCBP-201ENST00000260130 NR1D1P20393 614 aa16.77■□□□□ 0.27
SDCBP-201ENST00000260130 IGFALSP35858 605 aa16.77■□□□□ 0.27
SDCBP-201ENST00000260130 RABIFP47224 123 aa16.77■□□□□ 0.27
SDCBP-201ENST00000260130 WNT3AP56704 352 aa16.77■□□□□ 0.27
SDCBP-201ENST00000260130 HLTFQ14527 1009 aaKnown RBP eCLIP16.77■□□□□ 0.27
SDCBP-201ENST00000260130 DENND2CQ68D51 928 aa16.77■□□□□ 0.27
SDCBP-201ENST00000260130 KDELC1Q6UW63 502 aa16.77■□□□□ 0.27
SDCBP-201ENST00000260130 PTAR1Q7Z6K3 402 aaPredicted RBP16.77■□□□□ 0.27
SDCBP-201ENST00000260130 DCP2Q8IU60 420 aaKnown RBP16.77■□□□□ 0.27
SDCBP-201ENST00000260130 C1orf54Q8WWF1 131 aa16.77■□□□□ 0.27
SDCBP-201ENST00000260130 COQ10AQ96MF6 247 aa16.77■□□□□ 0.27
SDCBP-201ENST00000260130 ERVMER34-1Q9H9K5 563 aa16.77■□□□□ 0.27
SDCBP-201ENST00000260130 DLL3Q9NYJ7 618 aa16.77■□□□□ 0.27
SDCBP-201ENST00000260130 GOLGA8CPA6NN73 597 aa16.76■□□□□ 0.27
SDCBP-201ENST00000260130 ANXA9O76027 345 aa16.76■□□□□ 0.27
SDCBP-201ENST00000260130 NDST3O95803 873 aa16.76■□□□□ 0.27
SDCBP-201ENST00000260130 EPOP01588 193 aa16.76■□□□□ 0.27
SDCBP-201ENST00000260130 ZNF30P17039 623 aa16.76■□□□□ 0.27
SDCBP-201ENST00000260130 STIP1P31948 543 aaKnown RBP16.76■□□□□ 0.27
SDCBP-201ENST00000260130 PFN3P60673 137 aa16.76■□□□□ 0.27
SDCBP-201ENST00000260130 PTSQ03393 145 aa16.76■□□□□ 0.27
SDCBP-201ENST00000260130 MPP3Q13368 585 aa16.76■□□□□ 0.27
SDCBP-201ENST00000260130 IRF4Q15306 451 aa16.76■□□□□ 0.27
SDCBP-201ENST00000260130 SIX1Q15475 284 aaPredicted RBP16.76■□□□□ 0.27
SDCBP-201ENST00000260130 OASLQ15646 514 aaKnown RBP16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms