RNA–Protein interactions for RNA: ENST00000259605.10

RNF38-201, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 5,012 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-201ENST00000259605 SPATA21Q7Z572 469 aa4.04□□□□□ -1.76
RNF38-201ENST00000259605 OAFQ86UD1 273 aa4.04□□□□□ -1.76
RNF38-201ENST00000259605 AMZ2Q86W34 360 aa4.04□□□□□ -1.76
RNF38-201ENST00000259605 CENPLQ8N0S6 344 aaPredicted RBP4.04□□□□□ -1.76
RNF38-201ENST00000259605 MEIOBQ8N635 442 aa4.04□□□□□ -1.76
RNF38-201ENST00000259605 SLC5A8Q8N695 610 aa4.04□□□□□ -1.76
RNF38-201ENST00000259605 FBXO15Q8NCQ5 510 aaPredicted RBP4.04□□□□□ -1.76
RNF38-201ENST00000259605 OR4C15Q8NGM1 316 aa4.04□□□□□ -1.76
RNF38-201ENST00000259605 PSMA8Q8TAA3 256 aa4.04□□□□□ -1.76
RNF38-201ENST00000259605 LPPQ93052 612 aa4.04□□□□□ -1.76
RNF38-201ENST00000259605 FAM111AQ96PZ2 611 aa4.04□□□□□ -1.76
RNF38-201ENST00000259605 ZNF607Q96SK3 696 aa4.04□□□□□ -1.76
RNF38-201ENST00000259605 NTPCRQ9BSD7 190 aaKnown RBP4.04□□□□□ -1.76
RNF38-201ENST00000259605 XPO4Q9C0E2 1151 aaKnown RBP4.04□□□□□ -1.76
RNF38-201ENST00000259605 FZD3Q9NPG1 666 aa4.04□□□□□ -1.76
RNF38-201ENST00000259605 PNO1Q9NRX1 252 aaKnown RBP4.04□□□□□ -1.76
RNF38-201ENST00000259605 GTF2IRD1Q9UHL9 959 aa4.04□□□□□ -1.76
RNF38-201ENST00000259605 XPO7Q9UIA9 1087 aaKnown RBP4.04□□□□□ -1.76
RNF38-201ENST00000259605 YIPF1Q9Y548 306 aa4.04□□□□□ -1.76
RNF38-201ENST00000259605 PCDHB1Q9Y5F3 818 aa4.04□□□□□ -1.76
RNF38-201ENST00000259605 ADGRA3Q8IWK6 1321 aa4.04□□□□□ -1.76
RNF38-201ENST00000259605 LTBP4Q8N2S1 1624 aa4.04□□□□□ -1.76
RNF38-201ENST00000259605 TRBV23OR9-2A0A075B6M9 112 aa4.04□□□□□ -1.76
RNF38-201ENST00000259605 hCG_1809904A0A1W2PP81 198 aa4.04□□□□□ -1.76
RNF38-201ENST00000259605 A0A1W2PPE2 198 aa4.04□□□□□ -1.76
RNF38-201ENST00000259605 A0A1W2PR64 198 aa4.04□□□□□ -1.76
RNF38-201ENST00000259605 A0A1W2PRV1 198 aa4.04□□□□□ -1.76
RNF38-201ENST00000259605 GJE1A6NN92 205 aa4.04□□□□□ -1.76
RNF38-201ENST00000259605 IDSB3KWA1 339 aa4.04□□□□□ -1.76
RNF38-201ENST00000259605 POLR1CO15160 346 aaPredicted RBP4.04□□□□□ -1.76
RNF38-201ENST00000259605 C8GP07360 202 aa4.04□□□□□ -1.76
RNF38-201ENST00000259605 RARAP10276 462 aa4.04□□□□□ -1.76
RNF38-201ENST00000259605 CCNB1P14635 433 aa4.04□□□□□ -1.76
RNF38-201ENST00000259605 PFKLP17858 780 aa4.04□□□□□ -1.76
RNF38-201ENST00000259605 ZNF41P51814 821 aaPredicted RBP4.04□□□□□ -1.76
RNF38-201ENST00000259605 CHN2P52757 468 aa4.04□□□□□ -1.76
RNF38-201ENST00000259605 SLC6A3Q01959 620 aa4.04□□□□□ -1.76
RNF38-201ENST00000259605 STX3Q13277 289 aa4.04□□□□□ -1.76
RNF38-201ENST00000259605 MELKQ14680 651 aa4.04□□□□□ -1.76
RNF38-201ENST00000259605 PDCD4Q53EL6 469 aaKnown RBP4.04□□□□□ -1.76
RNF38-201ENST00000259605 GPAT3Q53EU6 434 aa4.04□□□□□ -1.76
RNF38-201ENST00000259605 VARS2Q5ST30 1063 aaKnown RBP4.04□□□□□ -1.76
RNF38-201ENST00000259605 C16orf89Q6UX73 402 aa4.04□□□□□ -1.76
RNF38-201ENST00000259605 DEFB106AQ8N104 65 aa4.04□□□□□ -1.76
RNF38-201ENST00000259605 FAM160A2Q8N612 972 aaPredicted RBP4.04□□□□□ -1.76
RNF38-201ENST00000259605 LINC00301Q8NCQ3 95 aa4.04□□□□□ -1.76
RNF38-201ENST00000259605 PPP1R35Q8TAP8 253 aa4.04□□□□□ -1.76
RNF38-201ENST00000259605 ADAMTS18Q8TE60 1221 aa4.04□□□□□ -1.76
RNF38-201ENST00000259605 CPA5Q8WXQ8 436 aa4.04□□□□□ -1.76
RNF38-201ENST00000259605 CENPIQ92674 756 aaPredicted RBP4.04□□□□□ -1.76
RNF38-201ENST00000259605 MUCL1Q96DR8 90 aa4.04□□□□□ -1.76
RNF38-201ENST00000259605 RNFT2Q96EX2 444 aa4.04□□□□□ -1.76
RNF38-201ENST00000259605 WDR92Q96MX6 357 aa4.04□□□□□ -1.76
RNF38-201ENST00000259605 PSKH2Q96QS6 385 aa4.04□□□□□ -1.76
RNF38-201ENST00000259605 EPYCQ99645 322 aa4.04□□□□□ -1.76
RNF38-201ENST00000259605 ACBD6Q9BR61 282 aa4.04□□□□□ -1.76
RNF38-201ENST00000259605 CADM1Q9BY67 442 aaKnown RBP4.04□□□□□ -1.76
RNF38-201ENST00000259605 LRRC4CQ9HCJ2 640 aa4.04□□□□□ -1.76
RNF38-201ENST00000259605 EXOSC4Q9NPD3 245 aaKnown RBP4.04□□□□□ -1.76
RNF38-201ENST00000259605 ANLNQ9NQW6 1124 aa4.04□□□□□ -1.76
RNF38-201ENST00000259605 ING3Q9NXR8 418 aa4.04□□□□□ -1.76
RNF38-201ENST00000259605 EURLQ9NYK6 297 aa4.04□□□□□ -1.76
RNF38-201ENST00000259605 CKLFQ9UBR5 152 aa4.04□□□□□ -1.76
RNF38-201ENST00000259605 RGS17Q9UGC6 210 aaPredicted RBP4.04□□□□□ -1.76
RNF38-201ENST00000259605 PFDN2Q9UHV9 154 aa4.04□□□□□ -1.76
RNF38-201ENST00000259605 MAN1B1Q9UKM7 699 aa4.04□□□□□ -1.76
RNF38-201ENST00000259605 KDM5AP29375 1690 aaKnown RBP4.04□□□□□ -1.76
RNF38-201ENST00000259605 A0A1B0GTW7 788 aa4.03□□□□□ -1.76
RNF38-201ENST00000259605 RBM47A0AV96 593 aaKnown RBP4.03□□□□□ -1.76
RNF38-201ENST00000259605 WDR91A4D1P6 747 aa4.03□□□□□ -1.76
RNF38-201ENST00000259605 A8MU76 341 aa4.03□□□□□ -1.76
RNF38-201ENST00000259605 PRRG2O14669 202 aa4.03□□□□□ -1.76
RNF38-201ENST00000259605 TRIM13O60858 407 aa4.03□□□□□ -1.76
RNF38-201ENST00000259605 NBNO60934 754 aa4.03□□□□□ -1.76
RNF38-201ENST00000259605 COQ9O75208 318 aa4.03□□□□□ -1.76
RNF38-201ENST00000259605 REM1O75628 298 aa4.03□□□□□ -1.76
RNF38-201ENST00000259605 FTCDO95954 541 aa4.03□□□□□ -1.76
RNF38-201ENST00000259605 CA3P07451 260 aa4.03□□□□□ -1.76
RNF38-201ENST00000259605 SPAM1P38567 509 aa4.03□□□□□ -1.76
RNF38-201ENST00000259605 RABIFP47224 123 aa4.03□□□□□ -1.76
RNF38-201ENST00000259605 PREPP48147 710 aa4.03□□□□□ -1.76
RNF38-201ENST00000259605 MAPKAPK2P49137 400 aa4.03□□□□□ -1.76
RNF38-201ENST00000259605 ATXN1P54253 815 aaKnown RBP4.03□□□□□ -1.76
RNF38-201ENST00000259605 GJA9P57773 515 aa4.03□□□□□ -1.76
RNF38-201ENST00000259605 RPS21P63220 83 aaKnown RBP4.03□□□□□ -1.76
RNF38-201ENST00000259605 MEF2AQ02078 507 aaPredicted RBP4.03□□□□□ -1.76
RNF38-201ENST00000259605 TBL3Q12788 808 aaKnown RBP4.03□□□□□ -1.76
RNF38-201ENST00000259605 SLC29A2Q14542 456 aa4.03□□□□□ -1.76
RNF38-201ENST00000259605 DUOXA1Q1HG43 343 aa4.03□□□□□ -1.76
RNF38-201ENST00000259605 SLC9B1Q4ZJI4 515 aa4.03□□□□□ -1.76
RNF38-201ENST00000259605 TBCELQ5QJ74 424 aa4.03□□□□□ -1.76
RNF38-201ENST00000259605 C9orf64Q5T6V5 341 aa4.03□□□□□ -1.76
RNF38-201ENST00000259605 ANXA8L1Q5VT79 327 aa4.03□□□□□ -1.76
RNF38-201ENST00000259605 RESP18Q5W5W9 173 aa4.03□□□□□ -1.76
RNF38-201ENST00000259605 MBLAC2Q68D91 279 aa4.03□□□□□ -1.76
RNF38-201ENST00000259605 PDPK2PQ6A1A2 396 aa4.03□□□□□ -1.76
RNF38-201ENST00000259605 CCDC80Q76M96 950 aa4.03□□□□□ -1.76
RNF38-201ENST00000259605 TMC3Q7Z5M5 1100 aa4.03□□□□□ -1.76
RNF38-201ENST00000259605 ECHDC2Q86YB7 292 aa4.03□□□□□ -1.76
RNF38-201ENST00000259605 CLEC10AQ8IUN9 316 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms