RNA–Protein interactions for RNA: ENST00000258781.10

CCM2-201, Transcript of CCM2 scaffold protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCM2, Length 1,894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-201ENST00000258781 PMLP29590 882 aa27.66■■■□□ 2.02
CCM2-201ENST00000258781 SLC8A1P32418 973 aa27.66■■■□□ 2.02
CCM2-201ENST00000258781 ABL2P42684 1182 aa27.66■■■□□ 2.02
CCM2-201ENST00000258781 CDKN2DP55273 166 aa27.66■■■□□ 2.02
CCM2-201ENST00000258781 CTC1Q2NKJ3 1217 aa27.66■■■□□ 2.02
CCM2-201ENST00000258781 PITRM1Q5JRX3 1037 aa27.66■■■□□ 2.02
CCM2-201ENST00000258781 KLC3Q6P597 504 aa27.66■■■□□ 2.02
CCM2-201ENST00000258781 KLHL29Q96CT2 875 aa27.66■■■□□ 2.02
CCM2-201ENST00000258781 TM6SF2Q9BZW4 377 aa27.66■■■□□ 2.02
CCM2-201ENST00000258781 POPDC3Q9HBV1 291 aa27.66■■■□□ 2.02
CCM2-201ENST00000258781 PCDHB9Q9Y5E1 797 aa27.66■■■□□ 2.02
CCM2-201ENST00000258781 EPHB1P54762 984 aa27.65■■■□□ 2.02
CCM2-201ENST00000258781 ANKRD54Q6NXT1 300 aa27.65■■■□□ 2.02
CCM2-201ENST00000258781 GPR149Q86SP6 731 aa27.65■■■□□ 2.02
CCM2-201ENST00000258781 PNPLA1Q8N8W4 532 aa27.65■■■□□ 2.02
CCM2-201ENST00000258781 SMIM14Q96QK8 99 aa27.65■■■□□ 2.02
CCM2-201ENST00000258781 TUBB6Q9BUF5 446 aa27.65■■■□□ 2.02
CCM2-201ENST00000258781 MAGEE1Q9HCI5 957 aa27.65■■■□□ 2.02
CCM2-201ENST00000258781 SLC40A1Q9NP59 571 aa27.65■■■□□ 2.02
CCM2-201ENST00000258781 POLR3BQ9NW08 1133 aaPredicted RBP27.65■■■□□ 2.02
CCM2-201ENST00000258781 COLQQ9Y215 455 aaPredicted RBP27.65■■■□□ 2.02
CCM2-201ENST00000258781 CRYL1Q9Y2S2 319 aa27.65■■■□□ 2.02
CCM2-201ENST00000258781 HNRNPCL1O60812 293 aaKnown RBP27.64■■■□□ 2.02
CCM2-201ENST00000258781 SOCS5O75159 536 aa27.64■■■□□ 2.02
CCM2-201ENST00000258781 HSPA4LO95757 839 aa27.64■■■□□ 2.02
CCM2-201ENST00000258781 IGSF6O95976 241 aa27.64■■■□□ 2.02
CCM2-201ENST00000258781 TCF3P15923 654 aa27.64■■■□□ 2.02
CCM2-201ENST00000258781 CSHL1Q14406 222 aa27.64■■■□□ 2.02
CCM2-201ENST00000258781 GRIN2CQ14957 1233 aa27.64■■■□□ 2.02
CCM2-201ENST00000258781 TECRLQ5HYJ1 363 aa27.64■■■□□ 2.02
CCM2-201ENST00000258781 ZNF549Q6P9A3 640 aa27.64■■■□□ 2.02
CCM2-201ENST00000258781 ATG14Q6ZNE5 492 aa27.64■■■□□ 2.02
CCM2-201ENST00000258781 ZNF557Q8N988 423 aaPredicted RBP27.64■■■□□ 2.02
CCM2-201ENST00000258781 TBC1D14Q9P2M4 693 aa27.64■■■□□ 2.02
CCM2-201ENST00000258781 PRUNE2Q8WUY3 3088 aa27.64■■■□□ 2.01
CCM2-201ENST00000258781 DOCK8Q8NF50 2099 aa27.64■■■□□ 2.01
CCM2-201ENST00000258781 H7C0S8 307 aa27.64■■■□□ 2.01
CCM2-201ENST00000258781 STX7O15400 261 aaKnown RBP27.64■■■□□ 2.01
CCM2-201ENST00000258781 SUOXP51687 545 aa27.64■■■□□ 2.01
CCM2-201ENST00000258781 USP4Q13107 963 aa27.64■■■□□ 2.01
CCM2-201ENST00000258781 ZNF77Q15935 545 aa27.64■■■□□ 2.01
CCM2-201ENST00000258781 DRC3Q9H069 523 aa27.64■■■□□ 2.01
CCM2-201ENST00000258781 EVLQ9UI08 416 aaPredicted RBP27.64■■■□□ 2.01
CCM2-201ENST00000258781 VPS9D1Q9Y2B5 631 aa27.64■■■□□ 2.01
CCM2-201ENST00000258781 ZNF711Q9Y462 761 aa27.64■■■□□ 2.01
CCM2-201ENST00000258781 FCHO1O14526 889 aa27.63■■■□□ 2.01
CCM2-201ENST00000258781 HTRA2O43464 458 aaPredicted RBP27.63■■■□□ 2.01
CCM2-201ENST00000258781 DLX3O60479 287 aa27.63■■■□□ 2.01
CCM2-201ENST00000258781 RBP1P09455 135 aa27.63■■■□□ 2.01
CCM2-201ENST00000258781 CCDC166P0CW27 439 aa27.63■■■□□ 2.01
CCM2-201ENST00000258781 T-ENOLP0DO92 83 aa27.63■■■□□ 2.01
CCM2-201ENST00000258781 DLX2Q07687 328 aaPredicted RBP27.63■■■□□ 2.01
CCM2-201ENST00000258781 BCL2L1Q07817 233 aa27.63■■■□□ 2.01
CCM2-201ENST00000258781 TMEM25Q86YD3 366 aa27.63■■■□□ 2.01
CCM2-201ENST00000258781 SPATA6LQ8N4H0 392 aa27.63■■■□□ 2.01
CCM2-201ENST00000258781 DDX51Q8N8A6 666 aaKnown RBP eCLIP27.63■■■□□ 2.01
CCM2-201ENST00000258781 PIH1D2Q8WWB5 315 aa27.63■■■□□ 2.01
CCM2-201ENST00000258781 AARSD1Q9BTE6 412 aaKnown RBP27.63■■■□□ 2.01
CCM2-201ENST00000258781 ARHGEF3Q9NR81 526 aa27.63■■■□□ 2.01
CCM2-201ENST00000258781 PNPOQ9NVS9 261 aa27.63■■■□□ 2.01
CCM2-201ENST00000258781 DNAJC28Q9NX36 388 aa27.63■■■□□ 2.01
CCM2-201ENST00000258781 RASSF9O75901 435 aa27.62■■■□□ 2.01
CCM2-201ENST00000258781 NQO1P15559 274 aaKnown RBP27.62■■■□□ 2.01
CCM2-201ENST00000258781 TARSP26639 723 aaKnown RBP27.62■■■□□ 2.01
CCM2-201ENST00000258781 HLA-FP30511 346 aa27.62■■■□□ 2.01
CCM2-201ENST00000258781 ADAM15Q13444 863 aa27.62■■■□□ 2.01
CCM2-201ENST00000258781 KRT72Q14CN4 511 aa27.62■■■□□ 2.01
CCM2-201ENST00000258781 ACAP2Q15057 778 aa27.62■■■□□ 2.01
CCM2-201ENST00000258781 CAMK1DQ8IU85 385 aa27.62■■■□□ 2.01
CCM2-201ENST00000258781 NPAS3Q8IXF0 933 aa27.62■■■□□ 2.01
CCM2-201ENST00000258781 INPP5DQ92835 1189 aa27.62■■■□□ 2.01
CCM2-201ENST00000258781 ISG20Q96AZ6 181 aaKnown RBP27.62■■■□□ 2.01
CCM2-201ENST00000258781 LRMDAQ9H2I8 198 aa27.62■■■□□ 2.01
CCM2-201ENST00000258781 CLEC1BQ9P126 229 aa27.62■■■□□ 2.01
CCM2-201ENST00000258781 FKBPLQ9UIM3 349 aa27.62■■■□□ 2.01
CCM2-201ENST00000258781 HS3ST2Q9Y278 367 aa27.62■■■□□ 2.01
CCM2-201ENST00000258781 TRAFD1O14545 582 aaPredicted RBP27.61■■■□□ 2.01
CCM2-201ENST00000258781 CCDC22O60826 627 aa27.61■■■□□ 2.01
CCM2-201ENST00000258781 ZNF821O75541 412 aaPredicted RBP27.61■■■□□ 2.01
CCM2-201ENST00000258781 SLC4A1P02730 911 aa27.61■■■□□ 2.01
CCM2-201ENST00000258781 ATP5F1P24539 256 aaPredicted RBP27.61■■■□□ 2.01
CCM2-201ENST00000258781 RASSF2P50749 326 aa27.61■■■□□ 2.01
CCM2-201ENST00000258781 DNAJB13P59910 316 aa27.61■■■□□ 2.01
CCM2-201ENST00000258781 RCN2Q14257 317 aa27.61■■■□□ 2.01
CCM2-201ENST00000258781 ALYREFQ86V81 257 aaKnown RBP27.61■■■□□ 2.01
CCM2-201ENST00000258781 LPGAT1Q92604 370 aa27.61■■■□□ 2.01
CCM2-201ENST00000258781 IRF7Q92985 503 aa27.61■■■□□ 2.01
CCM2-201ENST00000258781 C19orf43Q9BQ61 176 aa27.61■■■□□ 2.01
CCM2-201ENST00000258781 ATP13A3Q9H7F0 1226 aa27.61■■■□□ 2.01
CCM2-201ENST00000258781 PFDN6O15212 129 aa27.61■■■□□ 2.01
CCM2-201ENST00000258781 TBX10O75333 385 aa27.61■■■□□ 2.01
CCM2-201ENST00000258781 SRCP12931 536 aa27.61■■■□□ 2.01
CCM2-201ENST00000258781 HK2P52789 917 aa27.61■■■□□ 2.01
CCM2-201ENST00000258781 PFKPQ01813 784 aa27.61■■■□□ 2.01
CCM2-201ENST00000258781 ADGRE1Q14246 886 aa27.61■■■□□ 2.01
CCM2-201ENST00000258781 FUT11Q495W5 492 aa27.61■■■□□ 2.01
CCM2-201ENST00000258781 OR2AP1Q8NGE2 309 aa27.61■■■□□ 2.01
CCM2-201ENST00000258781 OTUB2Q96DC9 234 aa27.61■■■□□ 2.01
CCM2-201ENST00000258781 CCDC126Q96EE4 140 aa27.61■■■□□ 2.01
CCM2-201ENST00000258781 CDH19Q9H159 772 aa27.61■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms