RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 MTG2Q9H4K7 406 aa18.89■□□□□ 0.61
TRIM47-201ENST00000254816 FBXO10Q9UK96 956 aa18.89■□□□□ 0.61
TRIM47-201ENST00000254816 TTC34A8MYJ7 566 aa18.89■□□□□ 0.61
TRIM47-201ENST00000254816 STX7O15400 261 aaKnown RBP18.89■□□□□ 0.61
TRIM47-201ENST00000254816 UNC5CO95185 931 aa18.89■□□□□ 0.61
TRIM47-201ENST00000254816 ADH1CP00326 375 aa18.89■□□□□ 0.61
TRIM47-201ENST00000254816 SERPINA4P29622 427 aa18.89■□□□□ 0.61
TRIM47-201ENST00000254816 MAPK8P45983 427 aa18.89■□□□□ 0.61
TRIM47-201ENST00000254816 E2F5Q15329 346 aa18.89■□□□□ 0.61
TRIM47-201ENST00000254816 FASTKD1Q53R41 847 aaKnown RBP18.89■□□□□ 0.61
TRIM47-201ENST00000254816 TMEM184AQ6ZMB5 413 aa18.89■□□□□ 0.61
TRIM47-201ENST00000254816 KCTD4Q8WVF5 259 aa18.89■□□□□ 0.61
TRIM47-201ENST00000254816 MRGPRX3Q96LB0 322 aa18.89■□□□□ 0.61
TRIM47-201ENST00000254816 C1QTNF1Q9BXJ1 281 aa18.89■□□□□ 0.61
TRIM47-201ENST00000254816 MTF2Q9Y483 593 aaPredicted RBP18.89■□□□□ 0.61
TRIM47-201ENST00000254816 UNC80Q8N2C7 3258 aa18.88■□□□□ 0.61
TRIM47-201ENST00000254816 A0A0J9YYE9 177 aa18.88■□□□□ 0.61
TRIM47-201ENST00000254816 SOCS5O75159 536 aa18.88■□□□□ 0.61
TRIM47-201ENST00000254816 TULP3O75386 442 aa18.88■□□□□ 0.61
TRIM47-201ENST00000254816 TRBC1P01850 177 aa18.88■□□□□ 0.61
TRIM47-201ENST00000254816 ALDH3A1P30838 453 aa18.88■□□□□ 0.61
TRIM47-201ENST00000254816 MC4RP32245 332 aa18.88■□□□□ 0.61
TRIM47-201ENST00000254816 HNF1BP35680 557 aa18.88■□□□□ 0.61
TRIM47-201ENST00000254816 GLRBP48167 497 aa18.88■□□□□ 0.61
TRIM47-201ENST00000254816 PCLAFQ15004 111 aa18.88■□□□□ 0.61
TRIM47-201ENST00000254816 TAF1BQ53T94 588 aaPredicted RBP18.88■□□□□ 0.61
TRIM47-201ENST00000254816 HECTD2Q5U5R9 776 aa18.88■□□□□ 0.61
TRIM47-201ENST00000254816 MRNIPQ6NTE8 343 aa18.88■□□□□ 0.61
TRIM47-201ENST00000254816 PCDH20Q8N6Y1 951 aaKnown RBP18.88■□□□□ 0.61
TRIM47-201ENST00000254816 GPR150Q8NGU9 434 aa18.88■□□□□ 0.61
TRIM47-201ENST00000254816 ZNF395Q9H8N7 513 aaPredicted RBP18.88■□□□□ 0.61
TRIM47-201ENST00000254816 MAGEE1Q9HCI5 957 aa18.88■□□□□ 0.61
TRIM47-201ENST00000254816 GDE1Q9NZC3 331 aa18.88■□□□□ 0.61
TRIM47-201ENST00000254816 HAO1Q9UJM8 370 aa18.88■□□□□ 0.61
TRIM47-201ENST00000254816 NUMBLQ9Y6R0 609 aa18.88■□□□□ 0.61
TRIM47-201ENST00000254816 EYSQ5T1H1 3165 aa18.88■□□□□ 0.61
TRIM47-201ENST00000254816 COL4A3Q01955 1670 aa18.88■□□□□ 0.61
TRIM47-201ENST00000254816 CXorf51AA0A1B0GTR3 108 aa18.88■□□□□ 0.61
TRIM47-201ENST00000254816 GPR39O43194 453 aa18.88■□□□□ 0.61
TRIM47-201ENST00000254816 DCTN3O75935 186 aa18.88■□□□□ 0.61
TRIM47-201ENST00000254816 CLCN5P51795 746 aa18.88■□□□□ 0.61
TRIM47-201ENST00000254816 DLX2Q07687 328 aaPredicted RBP18.88■□□□□ 0.61
TRIM47-201ENST00000254816 AFTPHQ6ULP2 937 aa18.88■□□□□ 0.61
TRIM47-201ENST00000254816 LMNTD2Q8IXW0 634 aa18.88■□□□□ 0.61
TRIM47-201ENST00000254816 CENPLQ8N0S6 344 aaPredicted RBP18.88■□□□□ 0.61
TRIM47-201ENST00000254816 ZNF366Q8N895 744 aa18.88■□□□□ 0.61
TRIM47-201ENST00000254816 E2F7Q96AV8 911 aa18.88■□□□□ 0.61
TRIM47-201ENST00000254816 CEP44Q9C0F1 390 aa18.88■□□□□ 0.61
TRIM47-201ENST00000254816 HACD3Q9P035 362 aa18.88■□□□□ 0.61
TRIM47-201ENST00000254816 SIRPGQ9P1W8 387 aa18.88■□□□□ 0.61
TRIM47-201ENST00000254816 RUVBL2Q9Y230 463 aaKnown RBP18.88■□□□□ 0.61
TRIM47-201ENST00000254816 HOXC11O43248 304 aaPredicted RBP18.87■□□□□ 0.61
TRIM47-201ENST00000254816 UGT2B4P06133 528 aa18.87■□□□□ 0.61
TRIM47-201ENST00000254816 SLC12A2P55011 1212 aa18.87■□□□□ 0.61
TRIM47-201ENST00000254816 CDKN2DP55273 166 aa18.87■□□□□ 0.61
TRIM47-201ENST00000254816 POU4F1Q01851 419 aa18.87■□□□□ 0.61
TRIM47-201ENST00000254816 DLG1Q12959 904 aa18.87■□□□□ 0.61
TRIM47-201ENST00000254816 PEX6Q13608 980 aa18.87■□□□□ 0.61
TRIM47-201ENST00000254816 GAB4Q2WGN9 574 aa18.87■□□□□ 0.61
TRIM47-201ENST00000254816 LRRC73Q5JTD7 316 aa18.87■□□□□ 0.61
TRIM47-201ENST00000254816 PSAPL1Q6NUJ1 521 aa18.87■□□□□ 0.61
TRIM47-201ENST00000254816 ZNF549Q6P9A3 640 aa18.87■□□□□ 0.61
TRIM47-201ENST00000254816 VITQ6UXI7 678 aa18.87■□□□□ 0.61
TRIM47-201ENST00000254816 EP400NLQ6ZTU2 488 aa18.87■□□□□ 0.61
TRIM47-201ENST00000254816 OR2A12Q8NGT7 310 aa18.87■□□□□ 0.61
TRIM47-201ENST00000254816 GRIN3AQ8TCU5 1115 aa18.87■□□□□ 0.61
TRIM47-201ENST00000254816 TSSK1BQ9BXA7 367 aa18.87■□□□□ 0.61
TRIM47-201ENST00000254816 PLA2G2FQ9BZM2 168 aa18.87■□□□□ 0.61
TRIM47-201ENST00000254816 SUV39H2Q9H5I1 410 aa18.87■□□□□ 0.61
TRIM47-201ENST00000254816 TXLNGQ9NUQ3 528 aa18.87■□□□□ 0.61
TRIM47-201ENST00000254816 IL17CQ9P0M4 197 aa18.87■□□□□ 0.61
TRIM47-201ENST00000254816 CPSF2Q9P2I0 782 aaKnown RBP18.87■□□□□ 0.61
TRIM47-201ENST00000254816 ACOT9Q9Y305 439 aa18.87■□□□□ 0.61
TRIM47-201ENST00000254816 C1orf232A0A0U1RR37 186 aa18.86■□□□□ 0.61
TRIM47-201ENST00000254816 CLDN7O95471 211 aa18.86■□□□□ 0.61
TRIM47-201ENST00000254816 NFATC1O95644 943 aa18.86■□□□□ 0.61
TRIM47-201ENST00000254816 TROVE2P10155 538 aaKnown RBP eCLIP18.86■□□□□ 0.61
TRIM47-201ENST00000254816 PMLP29590 882 aa18.86■□□□□ 0.61
TRIM47-201ENST00000254816 STC1P52823 247 aa18.86■□□□□ 0.61
TRIM47-201ENST00000254816 BST1Q10588 318 aa18.86■□□□□ 0.61
TRIM47-201ENST00000254816 GRM2Q14416 872 aa18.86■□□□□ 0.61
TRIM47-201ENST00000254816 SWT1Q5T5J6 900 aaKnown RBP18.86■□□□□ 0.61
TRIM47-201ENST00000254816 NAIF1Q69YI7 327 aaPredicted RBP18.86■□□□□ 0.61
TRIM47-201ENST00000254816 GALNT7Q86SF2 657 aa18.86■□□□□ 0.61
TRIM47-201ENST00000254816 C10orf107Q8IVU9 208 aa18.86■□□□□ 0.61
TRIM47-201ENST00000254816 NXNL1Q96CM4 212 aa18.86■□□□□ 0.61
TRIM47-201ENST00000254816 FAM83CQ9BQN1 747 aa18.86■□□□□ 0.61
TRIM47-201ENST00000254816 NMRAL1Q9HBL8 299 aa18.86■□□□□ 0.61
TRIM47-201ENST00000254816 HPS4Q9NQG7 708 aa18.86■□□□□ 0.61
TRIM47-201ENST00000254816 CDH7Q9ULB5 785 aa18.86■□□□□ 0.61
TRIM47-201ENST00000254816 ANKRD6Q9Y2G4 727 aa18.86■□□□□ 0.61
TRIM47-201ENST00000254816 ZNF106Q9H2Y7 1883 aaKnown RBP18.86■□□□□ 0.61
TRIM47-201ENST00000254816 KIAA1549LQ6ZVL6 1849 aa18.86■□□□□ 0.61
TRIM47-201ENST00000254816 A0A0G2JND7 137 aa18.86■□□□□ 0.61
TRIM47-201ENST00000254816 CBX6O95503 412 aa18.86■□□□□ 0.61
TRIM47-201ENST00000254816 POP4O95707 220 aaKnown RBP18.86■□□□□ 0.61
TRIM47-201ENST00000254816 OGNP20774 298 aaKnown RBP18.86■□□□□ 0.61
TRIM47-201ENST00000254816 PSMA3P25788 255 aa18.86■□□□□ 0.61
TRIM47-201ENST00000254816 SKIV2L2P42285 1042 aaKnown RBP18.86■□□□□ 0.61
TRIM47-201ENST00000254816 POLD2P49005 469 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms