RNA–Protein interactions for RNA: ENST00000252597.7

USHBP1-201, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USHBP1, Length 3,335 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-201ENST00000252597 CYP4B1P13584 511 aa11.96□□□□□ -0.49
USHBP1-201ENST00000252597 PRKACGP22612 351 aa11.96□□□□□ -0.49
USHBP1-201ENST00000252597 RXRGP48443 463 aa11.96□□□□□ -0.49
USHBP1-201ENST00000252597 CD300CQ08708 224 aa11.96□□□□□ -0.49
USHBP1-201ENST00000252597 APOFQ13790 326 aa11.96□□□□□ -0.49
USHBP1-201ENST00000252597 POLD3Q15054 466 aaPredicted RBP11.96□□□□□ -0.49
USHBP1-201ENST00000252597 PRR23BQ6ZRT6 265 aa11.96□□□□□ -0.49
USHBP1-201ENST00000252597 C14orf80Q86SX3 495 aa11.96□□□□□ -0.49
USHBP1-201ENST00000252597 SLC15A3Q8IY34 581 aa11.96□□□□□ -0.49
USHBP1-201ENST00000252597 ANKRD13AQ8IZ07 590 aa11.96□□□□□ -0.49
USHBP1-201ENST00000252597 ABI1Q8IZP0 508 aa11.96□□□□□ -0.49
USHBP1-201ENST00000252597 PSD4Q8NDX1 1056 aa11.96□□□□□ -0.49
USHBP1-201ENST00000252597 RDH11Q8TC12 318 aa11.96□□□□□ -0.49
USHBP1-201ENST00000252597 ZC3H15Q8WU90 426 aaKnown RBP11.96□□□□□ -0.49
USHBP1-201ENST00000252597 ELMO1Q92556 727 aa11.96□□□□□ -0.49
USHBP1-201ENST00000252597 SDCCAG3Q96C92 435 aa11.96□□□□□ -0.49
USHBP1-201ENST00000252597 ZNF419Q96HQ0 510 aaPredicted RBP11.96□□□□□ -0.49
USHBP1-201ENST00000252597 MUS81Q96NY9 551 aa11.96□□□□□ -0.49
USHBP1-201ENST00000252597 HNRNPABQ99729 332 aaKnown RBP11.96□□□□□ -0.49
USHBP1-201ENST00000252597 C16orf70Q9BSU1 422 aa11.96□□□□□ -0.49
USHBP1-201ENST00000252597 SUCOQ9UBS9 1254 aaKnown RBP11.96□□□□□ -0.49
USHBP1-201ENST00000252597 A0A1B0GTL3 188 aa11.96□□□□□ -0.5
USHBP1-201ENST00000252597 MOXD2PA6NHM9 499 aa11.96□□□□□ -0.5
USHBP1-201ENST00000252597 NCAM2O15394 837 aa11.96□□□□□ -0.5
USHBP1-201ENST00000252597 XYLBO75191 536 aa11.96□□□□□ -0.5
USHBP1-201ENST00000252597 RBP1P09455 135 aa11.96□□□□□ -0.5
USHBP1-201ENST00000252597 HSPA1AP0DMV8 641 aaKnown RBP11.96□□□□□ -0.5
USHBP1-201ENST00000252597 HSPA1BP0DMV9 641 aaKnown RBP11.96□□□□□ -0.5
USHBP1-201ENST00000252597 SMPD1P17405 629 aa11.96□□□□□ -0.5
USHBP1-201ENST00000252597 ARNTP27540 789 aa11.96□□□□□ -0.5
USHBP1-201ENST00000252597 PRDX3P30048 256 aaKnown RBP11.96□□□□□ -0.5
USHBP1-201ENST00000252597 TMED10P49755 219 aaKnown RBP11.96□□□□□ -0.5
USHBP1-201ENST00000252597 AGTR2P50052 363 aa11.96□□□□□ -0.5
USHBP1-201ENST00000252597 CLCN2P51788 898 aa11.96□□□□□ -0.5
USHBP1-201ENST00000252597 EMP3P54852 163 aa11.96□□□□□ -0.5
USHBP1-201ENST00000252597 SPIDRQ14159 915 aa11.96□□□□□ -0.5
USHBP1-201ENST00000252597 KYAT1Q16773 422 aa11.96□□□□□ -0.5
USHBP1-201ENST00000252597 NOL9Q5SY16 702 aaKnown RBP11.96□□□□□ -0.5
USHBP1-201ENST00000252597 ZNF597Q96LX8 424 aa11.96□□□□□ -0.5
USHBP1-201ENST00000252597 INTS7Q9NVH2 962 aaKnown RBP11.96□□□□□ -0.5
USHBP1-201ENST00000252597 FAM8A1Q9UBU6 413 aa11.96□□□□□ -0.5
USHBP1-201ENST00000252597 DAPK2Q9UIK4 370 aa11.96□□□□□ -0.5
USHBP1-201ENST00000252597 COQ6Q9Y2Z9 468 aa11.96□□□□□ -0.5
USHBP1-201ENST00000252597 DNAJC15Q9Y5T4 150 aa11.96□□□□□ -0.5
USHBP1-201ENST00000252597 ACTL7AQ9Y615 435 aa11.96□□□□□ -0.5
USHBP1-201ENST00000252597 PHIPQ8WWQ0 1821 aa11.95□□□□□ -0.5
USHBP1-201ENST00000252597 SYCE1LA8MT33 242 aa11.95□□□□□ -0.5
USHBP1-201ENST00000252597 F8W810 466 aa11.95□□□□□ -0.5
USHBP1-201ENST00000252597 AZIN1O14977 448 aa11.95□□□□□ -0.5
USHBP1-201ENST00000252597 PGFP49763 221 aa11.95□□□□□ -0.5
USHBP1-201ENST00000252597 SERPINH1P50454 418 aaKnown RBP11.95□□□□□ -0.5
USHBP1-201ENST00000252597 DGKQP52824 942 aa11.95□□□□□ -0.5
USHBP1-201ENST00000252597 RAD23AP54725 363 aa11.95□□□□□ -0.5
USHBP1-201ENST00000252597 UFM1P61960 85 aa11.95□□□□□ -0.5
USHBP1-201ENST00000252597 CTBSQ01459 385 aa11.95□□□□□ -0.5
USHBP1-201ENST00000252597 EFEMP1Q12805 493 aa11.95□□□□□ -0.5
USHBP1-201ENST00000252597 ANKRD34AQ69YU3 496 aa11.95□□□□□ -0.5
USHBP1-201ENST00000252597 ABRAXAS1Q6UWZ7 409 aa11.95□□□□□ -0.5
USHBP1-201ENST00000252597 FUNDC1Q8IVP5 155 aa11.95□□□□□ -0.5
USHBP1-201ENST00000252597 CLHC1Q8NHS4 586 aa11.95□□□□□ -0.5
USHBP1-201ENST00000252597 C17orf80Q9BSJ5 609 aa11.95□□□□□ -0.5
USHBP1-201ENST00000252597 C11orf84Q9BUA3 381 aaPredicted RBP11.95□□□□□ -0.5
USHBP1-201ENST00000252597 DUS2Q9NX74 493 aaKnown RBP11.95□□□□□ -0.5
USHBP1-201ENST00000252597 RCOR3Q9P2K3 495 aaPredicted RBP11.95□□□□□ -0.5
USHBP1-201ENST00000252597 PNMA8BQ9ULN7 279 aaPredicted RBP11.95□□□□□ -0.5
USHBP1-201ENST00000252597 SH3GLB1Q9Y371 365 aa11.95□□□□□ -0.5
USHBP1-201ENST00000252597 NUP214P35658 2090 aaPredicted RBP11.95□□□□□ -0.5
USHBP1-201ENST00000252597 BTN3A1O00481 513 aa11.95□□□□□ -0.5
USHBP1-201ENST00000252597 SMIM10L2AP0DMW4 78 aa11.95□□□□□ -0.5
USHBP1-201ENST00000252597 SMIM10L2BP0DMW5 78 aa11.95□□□□□ -0.5
USHBP1-201ENST00000252597 RPS9P46781 194 aaKnown RBP11.95□□□□□ -0.5
USHBP1-201ENST00000252597 FPGSQ05932 587 aa11.95□□□□□ -0.5
USHBP1-201ENST00000252597 AAK1Q2M2I8 961 aa11.95□□□□□ -0.5
USHBP1-201ENST00000252597 SPESP1Q6UW49 350 aa11.95□□□□□ -0.5
USHBP1-201ENST00000252597 ERMP1Q7Z2K6 904 aa11.95□□□□□ -0.5
USHBP1-201ENST00000252597 CFAP52Q8N1V2 620 aa11.95□□□□□ -0.5
USHBP1-201ENST00000252597 SMYD1Q8NB12 490 aa11.95□□□□□ -0.5
USHBP1-201ENST00000252597 KIFC1Q9BW19 673 aa11.95□□□□□ -0.5
USHBP1-201ENST00000252597 SMURF2Q9HAU4 748 aa11.95□□□□□ -0.5
USHBP1-201ENST00000252597 POLE4Q9NR33 117 aa11.95□□□□□ -0.5
USHBP1-201ENST00000252597 GID8Q9NWU2 228 aa11.95□□□□□ -0.5
USHBP1-201ENST00000252597 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.95□□□□□ -0.5
USHBP1-201ENST00000252597 TMEM247A6NEH6 219 aa11.94□□□□□ -0.5
USHBP1-201ENST00000252597 CCDC154A6NI56 674 aa11.94□□□□□ -0.5
USHBP1-201ENST00000252597 FFAR3O14843 346 aa11.94□□□□□ -0.5
USHBP1-201ENST00000252597 GPR42O15529 346 aa11.94□□□□□ -0.5
USHBP1-201ENST00000252597 SYNCRIPO60506 623 aaKnown RBP11.94□□□□□ -0.5
USHBP1-201ENST00000252597 SNX2O60749 519 aa11.94□□□□□ -0.5
USHBP1-201ENST00000252597 GSK3BP49841 420 aa11.94□□□□□ -0.5
USHBP1-201ENST00000252597 GALNT2Q10471 571 aa11.94□□□□□ -0.5
USHBP1-201ENST00000252597 TSNQ15631 228 aaKnown RBP11.94□□□□□ -0.5
USHBP1-201ENST00000252597 CYP2A13Q16696 494 aa11.94□□□□□ -0.5
USHBP1-201ENST00000252597 TECRLQ5HYJ1 363 aa11.94□□□□□ -0.5
USHBP1-201ENST00000252597 MARCH8Q5T0T0 291 aa11.94□□□□□ -0.5
USHBP1-201ENST00000252597 MARC1Q5VT66 337 aa11.94□□□□□ -0.5
USHBP1-201ENST00000252597 SLC2A7Q6PXP3 512 aa11.94□□□□□ -0.5
USHBP1-201ENST00000252597 GALNT5Q7Z7M9 940 aa11.94□□□□□ -0.5
USHBP1-201ENST00000252597 CARM1Q86X55 608 aa11.94□□□□□ -0.5
USHBP1-201ENST00000252597 PSMG2Q969U7 264 aa11.94□□□□□ -0.5
USHBP1-201ENST00000252597 PTERQ96BW5 349 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms