RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 HEXIM1O94992 359 aaKnown RBP10.32□□□□□ -0.76
VPS50-201ENST00000251739 FUCA1P04066 466 aa10.32□□□□□ -0.76
VPS50-201ENST00000251739 MYCLP1P12525 358 aaPredicted RBP10.32□□□□□ -0.76
VPS50-201ENST00000251739 TCF4P15884 667 aa10.32□□□□□ -0.76
VPS50-201ENST00000251739 DESP17661 470 aa10.32□□□□□ -0.76
VPS50-201ENST00000251739 TNFAIP3P21580 790 aa10.32□□□□□ -0.76
VPS50-201ENST00000251739 LHCGRP22888 699 aa10.32□□□□□ -0.76
VPS50-201ENST00000251739 IL1R2P27930 398 aa10.32□□□□□ -0.76
VPS50-201ENST00000251739 TEAD1P28347 426 aa10.32□□□□□ -0.76
VPS50-201ENST00000251739 PCK1P35558 622 aa10.32□□□□□ -0.76
VPS50-201ENST00000251739 HSPA9P38646 679 aaKnown RBP10.32□□□□□ -0.76
VPS50-201ENST00000251739 POLR2LP62875 67 aaKnown RBP10.32□□□□□ -0.76
VPS50-201ENST00000251739 LBRQ14739 615 aaKnown RBP10.32□□□□□ -0.76
VPS50-201ENST00000251739 LAPTM4AQ15012 233 aa10.32□□□□□ -0.76
VPS50-201ENST00000251739 PPP6R3Q5H9R7 873 aaPredicted RBP10.32□□□□□ -0.76
VPS50-201ENST00000251739 SPECC1LQ69YQ0 1117 aa10.32□□□□□ -0.76
VPS50-201ENST00000251739 PNCKQ6P2M8 343 aa10.32□□□□□ -0.76
VPS50-201ENST00000251739 SASS6Q6UVJ0 657 aa10.32□□□□□ -0.76
VPS50-201ENST00000251739 ZNF571Q7Z3V5 609 aaPredicted RBP10.32□□□□□ -0.76
VPS50-201ENST00000251739 DTX1Q86Y01 620 aa10.32□□□□□ -0.76
VPS50-201ENST00000251739 NRROSQ86YC3 692 aa10.32□□□□□ -0.76
VPS50-201ENST00000251739 CYP4X1Q8N118 509 aa10.32□□□□□ -0.76
VPS50-201ENST00000251739 PGBD5Q8N414 524 aa10.32□□□□□ -0.76
VPS50-201ENST00000251739 LZTR1Q8N653 840 aa10.32□□□□□ -0.76
VPS50-201ENST00000251739 AOPEPQ8N6M6 819 aa10.32□□□□□ -0.76
VPS50-201ENST00000251739 FAM46DQ8NEK8 389 aa10.32□□□□□ -0.76
VPS50-201ENST00000251739 CCL4L1Q8NHW4 92 aa10.32□□□□□ -0.76
VPS50-201ENST00000251739 GPBAR1Q8TDU6 330 aa10.32□□□□□ -0.76
VPS50-201ENST00000251739 DTD2Q96FN9 168 aa10.32□□□□□ -0.76
VPS50-201ENST00000251739 CDK15Q96Q40 435 aa10.32□□□□□ -0.76
VPS50-201ENST00000251739 MGME1Q9BQP7 344 aa10.32□□□□□ -0.76
VPS50-201ENST00000251739 TEX101Q9BY14 249 aa10.32□□□□□ -0.76
VPS50-201ENST00000251739 FRMD8Q9BZ67 464 aaPredicted RBP10.32□□□□□ -0.76
VPS50-201ENST00000251739 ETNK2Q9NVF9 386 aa10.32□□□□□ -0.76
VPS50-201ENST00000251739 AIPL1Q9NZN9 384 aa10.32□□□□□ -0.76
VPS50-201ENST00000251739 SEPT3Q9UH03 358 aa10.32□□□□□ -0.76
VPS50-201ENST00000251739 LOXL2Q9Y4K0 774 aa10.32□□□□□ -0.76
VPS50-201ENST00000251739 ST14Q9Y5Y6 855 aa10.32□□□□□ -0.76
VPS50-201ENST00000251739 B4DGG1 531 aa10.31□□□□□ -0.76
VPS50-201ENST00000251739 B8ZZF3 427 aa10.31□□□□□ -0.76
VPS50-201ENST00000251739 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.31□□□□□ -0.76
VPS50-201ENST00000251739 PSMD11O00231 422 aa10.31□□□□□ -0.76
VPS50-201ENST00000251739 MAFKO60675 156 aa10.31□□□□□ -0.76
VPS50-201ENST00000251739 RNF8O76064 485 aa10.31□□□□□ -0.76
VPS50-201ENST00000251739 SOD1P00441 154 aa10.31□□□□□ -0.76
VPS50-201ENST00000251739 CEACAM5P06731 702 aa10.31□□□□□ -0.76
VPS50-201ENST00000251739 LIPCP11150 499 aa10.31□□□□□ -0.76
VPS50-201ENST00000251739 CCNB1P14635 433 aa10.31□□□□□ -0.76
VPS50-201ENST00000251739 ETV5P41161 510 aa10.31□□□□□ -0.76
VPS50-201ENST00000251739 SCNN1BP51168 640 aa10.31□□□□□ -0.76
VPS50-201ENST00000251739 RENBPP51606 427 aa10.31□□□□□ -0.76
VPS50-201ENST00000251739 B4GALNT1Q00973 533 aa10.31□□□□□ -0.76
VPS50-201ENST00000251739 TRAF2Q12933 501 aa10.31□□□□□ -0.76
VPS50-201ENST00000251739 SRSF6Q13247 344 aaKnown RBP10.31□□□□□ -0.76
VPS50-201ENST00000251739 C16orf72Q14CZ0 275 aa10.31□□□□□ -0.76
VPS50-201ENST00000251739 TGIF1Q15583 401 aa10.31□□□□□ -0.76
VPS50-201ENST00000251739 ZSCAN23Q3MJ62 389 aa10.31□□□□□ -0.76
VPS50-201ENST00000251739 POLNQ7Z5Q5 900 aa10.31□□□□□ -0.76
VPS50-201ENST00000251739 TAF8Q7Z7C8 310 aa10.31□□□□□ -0.76
VPS50-201ENST00000251739 HEATR4Q86WZ0 1026 aa10.31□□□□□ -0.76
VPS50-201ENST00000251739 TMEM159Q96B96 161 aa10.31□□□□□ -0.76
VPS50-201ENST00000251739 NUS1Q96E22 293 aa10.31□□□□□ -0.76
VPS50-201ENST00000251739 NUDCD1Q96RS6 583 aa10.31□□□□□ -0.76
VPS50-201ENST00000251739 ANP32EQ9BTT0 268 aa10.31□□□□□ -0.76
VPS50-201ENST00000251739 B3GNT4Q9C0J1 378 aa10.31□□□□□ -0.76
VPS50-201ENST00000251739 HAUS4Q9H6D7 363 aa10.31□□□□□ -0.76
VPS50-201ENST00000251739 CYP4F12Q9HCS2 524 aa10.31□□□□□ -0.76
VPS50-201ENST00000251739 SPATS2LQ9NUQ6 558 aaKnown RBP10.31□□□□□ -0.76
VPS50-201ENST00000251739 TRNAU1APQ9NX07 287 aaKnown RBP10.31□□□□□ -0.76
VPS50-201ENST00000251739 KCTD5Q9NXV2 234 aa10.31□□□□□ -0.76
VPS50-201ENST00000251739 LRIT1Q9P2V4 623 aa10.31□□□□□ -0.76
VPS50-201ENST00000251739 CNOT8Q9UFF9 292 aaKnown RBP10.31□□□□□ -0.76
VPS50-201ENST00000251739 PISDQ9UG56 409 aa10.31□□□□□ -0.76
VPS50-201ENST00000251739 SCINQ9Y6U3 715 aa10.31□□□□□ -0.76
VPS50-201ENST00000251739 PRAMEF33A0A0G2JMD5 474 aa10.3□□□□□ -0.76
VPS50-201ENST00000251739 A0A1W2PQ67 120 aa10.3□□□□□ -0.76
VPS50-201ENST00000251739 A0A1W2PQC6 194 aa10.3□□□□□ -0.76
VPS50-201ENST00000251739 TTC24A2A3L6 582 aaPredicted RBP10.3□□□□□ -0.76
VPS50-201ENST00000251739 NPIPB15A6NHN6 443 aaPredicted RBP10.3□□□□□ -0.76
VPS50-201ENST00000251739 C9orf172C9J069 976 aa10.3□□□□□ -0.76
VPS50-201ENST00000251739 PDE2AO00408 941 aaPredicted RBP10.3□□□□□ -0.76
VPS50-201ENST00000251739 DAPK3O43293 454 aa10.3□□□□□ -0.76
VPS50-201ENST00000251739 B4GAT1O43505 415 aa10.3□□□□□ -0.76
VPS50-201ENST00000251739 PRAMEF10O60809 474 aa10.3□□□□□ -0.76
VPS50-201ENST00000251739 CPNE6O95741 557 aa10.3□□□□□ -0.76
VPS50-201ENST00000251739 CPP00450 1065 aa10.3□□□□□ -0.76
VPS50-201ENST00000251739 FTLP02792 175 aaPredicted RBP10.3□□□□□ -0.76
VPS50-201ENST00000251739 FGF1P05230 155 aa10.3□□□□□ -0.76
VPS50-201ENST00000251739 JMJD7P0C870 316 aa10.3□□□□□ -0.76
VPS50-201ENST00000251739 ITIH1P19827 911 aa10.3□□□□□ -0.76
VPS50-201ENST00000251739 CDK11BP21127 795 aaKnown RBP10.3□□□□□ -0.76
VPS50-201ENST00000251739 VIPR1P32241 457 aa10.3□□□□□ -0.76
VPS50-201ENST00000251739 TYRO3Q06418 890 aa10.3□□□□□ -0.76
VPS50-201ENST00000251739 DPTQ07507 201 aa10.3□□□□□ -0.76
VPS50-201ENST00000251739 ZNF235Q14590 738 aa10.3□□□□□ -0.76
VPS50-201ENST00000251739 ACOX1Q15067 660 aa10.3□□□□□ -0.76
VPS50-201ENST00000251739 ASIC2Q16515 512 aa10.3□□□□□ -0.76
VPS50-201ENST00000251739 CLPPQ16740 277 aaPredicted RBP10.3□□□□□ -0.76
VPS50-201ENST00000251739 LINC00303Q3SY05 128 aa10.3□□□□□ -0.76
VPS50-201ENST00000251739 RALGPS1Q5JS13 557 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms