RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 CCZ1P86791 482 aaPredicted RBP13.82□□□□□ -0.2
DDX39A-201ENST00000242776 ACAD10Q6JQN1 1059 aa13.82□□□□□ -0.2
DDX39A-201ENST00000242776 UNC5BQ8IZJ1 945 aa13.82□□□□□ -0.2
DDX39A-201ENST00000242776 C9orf43Q8TAL5 461 aaPredicted RBP13.82□□□□□ -0.2
DDX39A-201ENST00000242776 TRIM44Q96DX7 344 aaPredicted RBP13.82□□□□□ -0.2
DDX39A-201ENST00000242776 PCDHB18PQ96TA0 734 aa13.82□□□□□ -0.2
DDX39A-201ENST00000242776 EIF3CQ99613 913 aaKnown RBP13.82□□□□□ -0.2
DDX39A-201ENST00000242776 CARS2Q9HA77 564 aaKnown RBP13.82□□□□□ -0.2
DDX39A-201ENST00000242776 OCIAD1Q9NX40 245 aa13.82□□□□□ -0.2
DDX39A-201ENST00000242776 SLC39A1Q9NY26 324 aa13.82□□□□□ -0.2
DDX39A-201ENST00000242776 TMEM9Q9P0T7 183 aa13.82□□□□□ -0.2
DDX39A-201ENST00000242776 ATP8A1Q9Y2Q0 1164 aa13.82□□□□□ -0.2
DDX39A-201ENST00000242776 EPN1Q9Y6I3 576 aaPredicted RBP13.82□□□□□ -0.2
DDX39A-201ENST00000242776 ZSCAN5CA6NGD5 496 aaPredicted RBP13.81□□□□□ -0.2
DDX39A-201ENST00000242776 TMCO5BA8MYB1 307 aa13.81□□□□□ -0.2
DDX39A-201ENST00000242776 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.81□□□□□ -0.2
DDX39A-201ENST00000242776 RASA4BC9J798 803 aa13.81□□□□□ -0.2
DDX39A-201ENST00000242776 RASA4O43374 803 aa13.81□□□□□ -0.2
DDX39A-201ENST00000242776 CREB3O43889 395 aa13.81□□□□□ -0.2
DDX39A-201ENST00000242776 RAD1O60671 282 aa13.81□□□□□ -0.2
DDX39A-201ENST00000242776 ECEL1O95672 775 aa13.81□□□□□ -0.2
DDX39A-201ENST00000242776 CALB1P05937 261 aa13.81□□□□□ -0.2
DDX39A-201ENST00000242776 EPHB2P29323 1055 aa13.81□□□□□ -0.2
DDX39A-201ENST00000242776 SDC4P31431 198 aa13.81□□□□□ -0.2
DDX39A-201ENST00000242776 MMP12P39900 470 aa13.81□□□□□ -0.2
DDX39A-201ENST00000242776 KIAA1024LP59773 190 aa13.81□□□□□ -0.2
DDX39A-201ENST00000242776 SNAP47Q5SQN1 464 aa13.81□□□□□ -0.2
DDX39A-201ENST00000242776 DENND2CQ68D51 928 aa13.81□□□□□ -0.2
DDX39A-201ENST00000242776 SCYL2Q6P3W7 929 aa13.81□□□□□ -0.2
DDX39A-201ENST00000242776 SLC30A9Q6PML9 568 aa13.81□□□□□ -0.2
DDX39A-201ENST00000242776 ZNF761Q86XN6 746 aaPredicted RBP13.81□□□□□ -0.2
DDX39A-201ENST00000242776 PHF13Q86YI8 300 aaPredicted RBP13.81□□□□□ -0.2
DDX39A-201ENST00000242776 KIAA1524Q8TCG1 905 aa13.81□□□□□ -0.2
DDX39A-201ENST00000242776 FAM172AQ8WUF8 416 aa13.81□□□□□ -0.2
DDX39A-201ENST00000242776 SPTLC3Q9NUV7 552 aa13.81□□□□□ -0.2
DDX39A-201ENST00000242776 ADAM22Q9P0K1 906 aa13.81□□□□□ -0.2
DDX39A-201ENST00000242776 MFHAS1Q9Y4C4 1052 aa13.81□□□□□ -0.2
DDX39A-201ENST00000242776 PRSS38A1L453 326 aa13.8□□□□□ -0.2
DDX39A-201ENST00000242776 EFCAB7A8K855 629 aa13.8□□□□□ -0.2
DDX39A-201ENST00000242776 A8MU76 341 aa13.8□□□□□ -0.2
DDX39A-201ENST00000242776 LCA5LO95447 670 aa13.8□□□□□ -0.2
DDX39A-201ENST00000242776 FGF1P05230 155 aa13.8□□□□□ -0.2
DDX39A-201ENST00000242776 ELFN1P0C7U0 828 aa13.8□□□□□ -0.2
DDX39A-201ENST00000242776 MYBL1P10243 752 aa13.8□□□□□ -0.2
DDX39A-201ENST00000242776 NR1D1P20393 614 aa13.8□□□□□ -0.2
DDX39A-201ENST00000242776 CD1CP29017 333 aa13.8□□□□□ -0.2
DDX39A-201ENST00000242776 CSTF2P33240 577 aaKnown RBP eCLIP13.8□□□□□ -0.2
DDX39A-201ENST00000242776 GNPDA1P46926 289 aa13.8□□□□□ -0.2
DDX39A-201ENST00000242776 RGRP47804 291 aa13.8□□□□□ -0.2
DDX39A-201ENST00000242776 ACOX1Q15067 660 aa13.8□□□□□ -0.2
DDX39A-201ENST00000242776 DEFB109BQ30KR1 87 aa13.8□□□□□ -0.2
DDX39A-201ENST00000242776 ATP1A1-AS1Q5TC04 95 aa13.8□□□□□ -0.2
DDX39A-201ENST00000242776 ANKS6Q68DC2 871 aa13.8□□□□□ -0.2
DDX39A-201ENST00000242776 C16orf46Q6P387 395 aa13.8□□□□□ -0.2
DDX39A-201ENST00000242776 RAD9BQ6WBX8 426 aa13.8□□□□□ -0.2
DDX39A-201ENST00000242776 DNAAF5Q86Y56 855 aa13.8□□□□□ -0.2
DDX39A-201ENST00000242776 RTL3Q8N8U3 475 aaKnown RBP13.8□□□□□ -0.2
DDX39A-201ENST00000242776 PTCD2Q8WV60 388 aaKnown RBP13.8□□□□□ -0.2
DDX39A-201ENST00000242776 CTRCQ99895 268 aa13.8□□□□□ -0.2
DDX39A-201ENST00000242776 C11orf70Q9BRQ4 267 aa13.8□□□□□ -0.2
DDX39A-201ENST00000242776 ISCUQ9H1K1 167 aa13.8□□□□□ -0.2
DDX39A-201ENST00000242776 WDR26Q9H7D7 661 aa13.8□□□□□ -0.2
DDX39A-201ENST00000242776 LRRC4CQ9HCJ2 640 aa13.8□□□□□ -0.2
DDX39A-201ENST00000242776 UBA2Q9UBT2 640 aaPredicted RBP13.8□□□□□ -0.2
DDX39A-201ENST00000242776 ANAPC2Q9UJX6 822 aa13.8□□□□□ -0.2
DDX39A-201ENST00000242776 SPTAN1Q13813 2472 aaKnown RBP13.8□□□□□ -0.2
DDX39A-201ENST00000242776 ICE1Q9Y2F5 2266 aa13.8□□□□□ -0.2
DDX39A-201ENST00000242776 TRBV23OR9-2A0A075B6M9 112 aa13.8□□□□□ -0.2
DDX39A-201ENST00000242776 CXorf51AA0A1B0GTR3 108 aa13.8□□□□□ -0.2
DDX39A-201ENST00000242776 GOLGA6CA6NDK9 693 aa13.8□□□□□ -0.2
DDX39A-201ENST00000242776 GOLGA6BA6NDN3 693 aa13.8□□□□□ -0.2
DDX39A-201ENST00000242776 ZNF891A8MT65 544 aaPredicted RBP13.8□□□□□ -0.2
DDX39A-201ENST00000242776 J3KR12 359 aa13.8□□□□□ -0.2
DDX39A-201ENST00000242776 MTSS1O43312 755 aa13.8□□□□□ -0.2
DDX39A-201ENST00000242776 FTLP02792 175 aaPredicted RBP13.8□□□□□ -0.2
DDX39A-201ENST00000242776 GOLGA6DP0CG33 693 aa13.8□□□□□ -0.2
DDX39A-201ENST00000242776 MMP8P22894 467 aa13.8□□□□□ -0.2
DDX39A-201ENST00000242776 KELP23276 732 aa13.8□□□□□ -0.2
DDX39A-201ENST00000242776 HDAC4P56524 1084 aa13.8□□□□□ -0.2
DDX39A-201ENST00000242776 NRG1Q02297 640 aaPredicted RBP13.8□□□□□ -0.2
DDX39A-201ENST00000242776 RALGDSQ12967 914 aa13.8□□□□□ -0.2
DDX39A-201ENST00000242776 SERINC3Q13530 473 aa13.8□□□□□ -0.2
DDX39A-201ENST00000242776 INO80DQ53TQ3 878 aaPredicted RBP13.8□□□□□ -0.2
DDX39A-201ENST00000242776 MON1BQ7L1V2 547 aa13.8□□□□□ -0.2
DDX39A-201ENST00000242776 NRROSQ86YC3 692 aa13.8□□□□□ -0.2
DDX39A-201ENST00000242776 MCOLN2Q8IZK6 566 aa13.8□□□□□ -0.2
DDX39A-201ENST00000242776 FAM26EQ8N5C1 309 aa13.8□□□□□ -0.2
DDX39A-201ENST00000242776 CASKIN2Q8WXE0 1202 aa13.8□□□□□ -0.2
DDX39A-201ENST00000242776 CTNNBL1Q8WYA6 563 aaPredicted RBP13.8□□□□□ -0.2
DDX39A-201ENST00000242776 CELF6Q96J87 481 aaKnown RBP13.8□□□□□ -0.2
DDX39A-201ENST00000242776 GPN2Q9H9Y4 310 aaPredicted RBP13.8□□□□□ -0.2
DDX39A-201ENST00000242776 TMEM51Q9NW97 253 aa13.8□□□□□ -0.2
DDX39A-201ENST00000242776 GOLGA6AQ9NYA3 693 aa13.8□□□□□ -0.2
DDX39A-201ENST00000242776 TAS2R14Q9NYV8 317 aa13.8□□□□□ -0.2
DDX39A-201ENST00000242776 TAAR2Q9P1P5 351 aa13.8□□□□□ -0.2
DDX39A-201ENST00000242776 INTUQ9ULD6 942 aa13.8□□□□□ -0.2
DDX39A-201ENST00000242776 NENFQ9UMX5 172 aa13.8□□□□□ -0.2
DDX39A-201ENST00000242776 USP9YO00507 2555 aaPredicted RBP13.79□□□□□ -0.2
DDX39A-201ENST00000242776 TSPAN11A1L157 253 aa13.79□□□□□ -0.2
DDX39A-201ENST00000242776 ANKRD62A6NC57 917 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms