RNA–Protein interactions for RNA: ENST00000241704.7

COPA-201, Transcript of coatomer protein complex subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPA, Length 4,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-201ENST00000241704 LYPLA1O75608 230 aaPredicted RBP10.99□□□□□ -0.65
COPA-201ENST00000241704 FAM163BP0C2L3 166 aa10.99□□□□□ -0.65
COPA-201ENST00000241704 PTPN3P26045 913 aa10.99□□□□□ -0.65
COPA-201ENST00000241704 GRIA2P42262 883 aa10.99□□□□□ -0.65
COPA-201ENST00000241704 CRADDP78560 199 aa10.99□□□□□ -0.65
COPA-201ENST00000241704 GPM6BQ13491 265 aa10.99□□□□□ -0.65
COPA-201ENST00000241704 SYTL1Q8IYJ3 562 aa10.99□□□□□ -0.65
COPA-201ENST00000241704 NDRG1Q92597 394 aaKnown RBP10.99□□□□□ -0.65
COPA-201ENST00000241704 EBF4Q9BQW3 602 aa10.99□□□□□ -0.65
COPA-201ENST00000241704 EVA1BQ9NVM1 165 aa10.99□□□□□ -0.65
COPA-201ENST00000241704 STMN3Q9NZ72 180 aa10.99□□□□□ -0.65
COPA-201ENST00000241704 CFAP97Q9P2B7 532 aa10.99□□□□□ -0.65
COPA-201ENST00000241704 HSFX1Q9UBD0 423 aa10.99□□□□□ -0.65
COPA-201ENST00000241704 BUD23O43709 281 aaKnown RBP10.99□□□□□ -0.65
COPA-201ENST00000241704 AP1G1O43747 822 aa10.99□□□□□ -0.65
COPA-201ENST00000241704 SERPINI2O75830 405 aa10.99□□□□□ -0.65
COPA-201ENST00000241704 ITGB6P18564 788 aa10.99□□□□□ -0.65
COPA-201ENST00000241704 TYMPP19971 482 aa10.99□□□□□ -0.65
COPA-201ENST00000241704 FASP25445 335 aa10.99□□□□□ -0.65
COPA-201ENST00000241704 GBE1Q04446 702 aa10.99□□□□□ -0.65
COPA-201ENST00000241704 TRAPPC5Q8IUR0 188 aa10.99□□□□□ -0.65
COPA-201ENST00000241704 ZNF555Q8NEP9 628 aa10.99□□□□□ -0.65
COPA-201ENST00000241704 LRRN4Q8WUT4 740 aa10.99□□□□□ -0.65
COPA-201ENST00000241704 FIZ1Q96SL8 496 aa10.99□□□□□ -0.65
COPA-201ENST00000241704 CCDC106Q9BWC9 280 aa10.99□□□□□ -0.65
COPA-201ENST00000241704 RGS18Q9NS28 235 aa10.99□□□□□ -0.65
COPA-201ENST00000241704 ANKRD36CQ5JPF3 1778 aa10.99□□□□□ -0.65
COPA-201ENST00000241704 ADAMTS7Q9UKP4 1686 aa10.99□□□□□ -0.65
COPA-201ENST00000241704 BCLAF3A2AJT9 711 aaKnown RBP10.99□□□□□ -0.65
COPA-201ENST00000241704 PSMD11O00231 422 aa10.99□□□□□ -0.65
COPA-201ENST00000241704 SYN3O14994 580 aa10.99□□□□□ -0.65
COPA-201ENST00000241704 TBC1D4O60343 1298 aa10.99□□□□□ -0.65
COPA-201ENST00000241704 ITGAXP20702 1163 aa10.99□□□□□ -0.65
COPA-201ENST00000241704 MSX2P35548 267 aaPredicted RBP10.99□□□□□ -0.65
COPA-201ENST00000241704 HTRA3P83110 453 aa10.99□□□□□ -0.65
COPA-201ENST00000241704 GHRHRQ02643 423 aa10.99□□□□□ -0.65
COPA-201ENST00000241704 TAPT1Q6NXT6 567 aa10.99□□□□□ -0.65
COPA-201ENST00000241704 PRR23CQ6ZRP0 262 aa10.99□□□□□ -0.65
COPA-201ENST00000241704 CPNE8Q86YQ8 564 aa10.99□□□□□ -0.65
COPA-201ENST00000241704 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.99□□□□□ -0.65
COPA-201ENST00000241704 TUBGCP3Q96CW5 907 aa10.99□□□□□ -0.65
COPA-201ENST00000241704 DNAJC28Q9NX36 388 aa10.99□□□□□ -0.65
COPA-201ENST00000241704 TAS2R13Q9NYV9 303 aa10.99□□□□□ -0.65
COPA-201ENST00000241704 MYO5AQ9Y4I1 1855 aaKnown RBP10.99□□□□□ -0.65
COPA-201ENST00000241704 SIPA1L3O60292 1781 aaPredicted RBP10.98□□□□□ -0.65
COPA-201ENST00000241704 TMEM114B3SHH9 223 aa10.98□□□□□ -0.65
COPA-201ENST00000241704 SNPHO15079 494 aa10.98□□□□□ -0.65
COPA-201ENST00000241704 CD86P42081 329 aa10.98□□□□□ -0.65
COPA-201ENST00000241704 KCNK10P57789 538 aa10.98□□□□□ -0.65
COPA-201ENST00000241704 GNA12Q03113 381 aa10.98□□□□□ -0.65
COPA-201ENST00000241704 DRICH1Q6PGQ1 229 aaPredicted RBP10.98□□□□□ -0.65
COPA-201ENST00000241704 LAYNQ6UX15 382 aa10.98□□□□□ -0.65
COPA-201ENST00000241704 CYP2R1Q6VVX0 501 aa10.98□□□□□ -0.65
COPA-201ENST00000241704 UNC5AQ6ZN44 842 aa10.98□□□□□ -0.65
COPA-201ENST00000241704 TAS1R3Q7RTX0 852 aa10.98□□□□□ -0.65
COPA-201ENST00000241704 CYP2U1Q7Z449 544 aa10.98□□□□□ -0.65
COPA-201ENST00000241704 C11orf74Q86VG3 221 aa10.98□□□□□ -0.65
COPA-201ENST00000241704 DHFR2Q86XF0 187 aa10.98□□□□□ -0.65
COPA-201ENST00000241704 CLEC4FQ8N1N0 589 aa10.98□□□□□ -0.65
COPA-201ENST00000241704 CRYBG2Q8N1P7 616 aa10.98□□□□□ -0.65
COPA-201ENST00000241704 NIPA2Q8N8Q9 360 aa10.98□□□□□ -0.65
COPA-201ENST00000241704 KCTD15Q96SI1 283 aaPredicted RBP10.98□□□□□ -0.65
COPA-201ENST00000241704 MRPS17Q9Y2R5 130 aaKnown RBP10.98□□□□□ -0.65
COPA-201ENST00000241704 TJP1Q07157 1748 aa10.98□□□□□ -0.65
COPA-201ENST00000241704 ABHD14A-ACY1A0A1B0GW23 586 aa10.98□□□□□ -0.65
COPA-201ENST00000241704 RAD51BO15315 384 aa10.98□□□□□ -0.65
COPA-201ENST00000241704 NFATC1O95644 943 aa10.98□□□□□ -0.65
COPA-201ENST00000241704 VEGFBP49765 207 aa10.98□□□□□ -0.65
COPA-201ENST00000241704 CDH15P55291 814 aa10.98□□□□□ -0.65
COPA-201ENST00000241704 PURAQ00577 322 aaKnown RBP10.98□□□□□ -0.65
COPA-201ENST00000241704 MSLNQ13421 630 aaPredicted RBP10.98□□□□□ -0.65
COPA-201ENST00000241704 TAF5Q15542 800 aa10.98□□□□□ -0.65
COPA-201ENST00000241704 IQCF2Q8IXL9 164 aa10.98□□□□□ -0.65
COPA-201ENST00000241704 TAGAPQ8N103 731 aa10.98□□□□□ -0.65
COPA-201ENST00000241704 FBXO27Q8NI29 283 aa10.98□□□□□ -0.65
COPA-201ENST00000241704 CHID1Q9BWS9 393 aa10.98□□□□□ -0.65
COPA-201ENST00000241704 COQ10BQ9H8M1 238 aa10.98□□□□□ -0.65
COPA-201ENST00000241704 NMRAL1Q9HBL8 299 aa10.98□□□□□ -0.65
COPA-201ENST00000241704 ERVK-11Q9UQG0 969 aa10.98□□□□□ -0.65
COPA-201ENST00000241704 TOGARAM1Q9Y4F4 1720 aa10.98□□□□□ -0.65
COPA-201ENST00000241704 A0A1W2PQH9 124 aa10.98□□□□□ -0.65
COPA-201ENST00000241704 C8AP07357 584 aa10.98□□□□□ -0.65
COPA-201ENST00000241704 PIK3R1P27986 724 aa10.98□□□□□ -0.65
COPA-201ENST00000241704 NME5P56597 212 aa10.98□□□□□ -0.65
COPA-201ENST00000241704 RAB30Q15771 203 aa10.98□□□□□ -0.65
COPA-201ENST00000241704 DEPDC1Q5TB30 811 aa10.98□□□□□ -0.65
COPA-201ENST00000241704 BROXQ5VW32 411 aa10.98□□□□□ -0.65
COPA-201ENST00000241704 LMO3Q8TAP4 145 aa10.98□□□□□ -0.65
COPA-201ENST00000241704 ZNF420Q8TAQ5 688 aaPredicted RBP10.98□□□□□ -0.65
COPA-201ENST00000241704 CD101Q93033 1021 aa10.98□□□□□ -0.65
COPA-201ENST00000241704 RCN3Q96D15 328 aa10.98□□□□□ -0.65
COPA-201ENST00000241704 TCF12Q99081 682 aa10.98□□□□□ -0.65
COPA-201ENST00000241704 CIB1Q99828 191 aa10.98□□□□□ -0.65
COPA-201ENST00000241704 BCO2Q9BYV7 579 aa10.98□□□□□ -0.65
COPA-201ENST00000241704 CNTN3Q9P232 1028 aa10.98□□□□□ -0.65
COPA-201ENST00000241704 HMGXB4Q9UGU5 601 aa10.98□□□□□ -0.65
COPA-201ENST00000241704 PNMA8BQ9ULN7 279 aaPredicted RBP10.98□□□□□ -0.65
COPA-201ENST00000241704 URB1O60287 2271 aaKnown RBP10.98□□□□□ -0.65
COPA-201ENST00000241704 A0A1W2PPW3 197 aa10.97□□□□□ -0.65
COPA-201ENST00000241704 NEDD8-MDP1E9PL57 170 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms