RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 NME8Q8N427 588 aa7.98□□□□□ -1.13
CXCR4-201ENST00000241393 LINC00482Q8N8I6 264 aa7.98□□□□□ -1.13
CXCR4-201ENST00000241393 B3GALNT2Q8NCR0 500 aa7.98□□□□□ -1.13
CXCR4-201ENST00000241393 DEPDC1BQ8WUY9 529 aa7.98□□□□□ -1.13
CXCR4-201ENST00000241393 N4BP2L2Q92802 583 aaPredicted RBP7.98□□□□□ -1.13
CXCR4-201ENST00000241393 ATP2A3Q93084 1043 aa7.98□□□□□ -1.13
CXCR4-201ENST00000241393 NTAN1Q96AB6 310 aa7.98□□□□□ -1.13
CXCR4-201ENST00000241393 ZBTB8AQ96BR9 441 aa7.98□□□□□ -1.13
CXCR4-201ENST00000241393 OXNAD1Q96HP4 312 aaPredicted RBP7.98□□□□□ -1.13
CXCR4-201ENST00000241393 SLC2A13Q96QE2 648 aa7.98□□□□□ -1.13
CXCR4-201ENST00000241393 NPY6RQ99463 290 aa7.98□□□□□ -1.13
CXCR4-201ENST00000241393 DUSP16Q9BY84 665 aa7.98□□□□□ -1.13
CXCR4-201ENST00000241393 BRD8Q9H0E9 1235 aa7.98□□□□□ -1.13
CXCR4-201ENST00000241393 DPEP3Q9H4B8 488 aa7.98□□□□□ -1.13
CXCR4-201ENST00000241393 NXF3Q9H4D5 531 aaKnown RBP7.98□□□□□ -1.13
CXCR4-201ENST00000241393 CXorf56Q9H5V9 222 aa7.98□□□□□ -1.13
CXCR4-201ENST00000241393 SPON1Q9HCB6 807 aa7.98□□□□□ -1.13
CXCR4-201ENST00000241393 THAP1Q9NVV9 213 aa7.98□□□□□ -1.13
CXCR4-201ENST00000241393 CROTQ9UKG9 612 aa7.98□□□□□ -1.13
CXCR4-201ENST00000241393 INVSQ9Y283 1065 aa7.98□□□□□ -1.13
CXCR4-201ENST00000241393 MAD1L1Q9Y6D9 718 aa7.98□□□□□ -1.13
CXCR4-201ENST00000241393 ERI2A8K979 691 aaKnown RBP7.98□□□□□ -1.13
CXCR4-201ENST00000241393 BTBD19C9JJ37 291 aa7.98□□□□□ -1.13
CXCR4-201ENST00000241393 H0Y858 1186 aa7.98□□□□□ -1.13
CXCR4-201ENST00000241393 HAS3O00219 553 aa7.98□□□□□ -1.13
CXCR4-201ENST00000241393 FCHO1O14526 889 aa7.98□□□□□ -1.13
CXCR4-201ENST00000241393 NCAM2O15394 837 aa7.98□□□□□ -1.13
CXCR4-201ENST00000241393 MTSS1O43312 755 aa7.98□□□□□ -1.13
CXCR4-201ENST00000241393 DIAPH2O60879 1101 aa7.98□□□□□ -1.13
CXCR4-201ENST00000241393 RARBP10826 455 aa7.98□□□□□ -1.13
CXCR4-201ENST00000241393 MYL2P10916 166 aa7.98□□□□□ -1.13
CXCR4-201ENST00000241393 ADORA2BP29275 332 aa7.98□□□□□ -1.13
CXCR4-201ENST00000241393 HCAR3P49019 387 aa7.98□□□□□ -1.13
CXCR4-201ENST00000241393 SULT1E1P49888 294 aa7.98□□□□□ -1.13
CXCR4-201ENST00000241393 EPHB3P54753 998 aa7.98□□□□□ -1.13
CXCR4-201ENST00000241393 GJA9P57773 515 aa7.98□□□□□ -1.13
CXCR4-201ENST00000241393 SCAPQ12770 1279 aa7.98□□□□□ -1.13
CXCR4-201ENST00000241393 MYBPC3Q14896 1274 aa7.98□□□□□ -1.13
CXCR4-201ENST00000241393 ACAP2Q15057 778 aa7.98□□□□□ -1.13
CXCR4-201ENST00000241393 TRMT10BQ6PF06 316 aaKnown RBP7.98□□□□□ -1.13
CXCR4-201ENST00000241393 PIGZQ86VD9 579 aa7.98□□□□□ -1.13
CXCR4-201ENST00000241393 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.98□□□□□ -1.13
CXCR4-201ENST00000241393 DEFB106AQ8N104 65 aa7.98□□□□□ -1.13
CXCR4-201ENST00000241393 NDUFAF2Q8N183 169 aa7.98□□□□□ -1.13
CXCR4-201ENST00000241393 CCDC185Q8N715 623 aa7.98□□□□□ -1.13
CXCR4-201ENST00000241393 STKLD1Q8NE28 680 aa7.98□□□□□ -1.13
CXCR4-201ENST00000241393 BHLHE22Q8NFJ8 381 aaPredicted RBP7.98□□□□□ -1.13
CXCR4-201ENST00000241393 SLC2A14Q8TDB8 520 aa7.98□□□□□ -1.13
CXCR4-201ENST00000241393 CLEC4CQ8WTT0 213 aa7.98□□□□□ -1.13
CXCR4-201ENST00000241393 RNF139Q8WU17 664 aa7.98□□□□□ -1.13
CXCR4-201ENST00000241393 AUTS2Q8WXX7 1259 aa7.98□□□□□ -1.13
CXCR4-201ENST00000241393 NUDCD1Q96RS6 583 aa7.98□□□□□ -1.13
CXCR4-201ENST00000241393 PARK7Q99497 189 aaKnown RBP7.98□□□□□ -1.13
CXCR4-201ENST00000241393 SGPP1Q9BX95 441 aa7.98□□□□□ -1.13
CXCR4-201ENST00000241393 CADM1Q9BY67 442 aaKnown RBP7.98□□□□□ -1.13
CXCR4-201ENST00000241393 FAM49AQ9H0Q0 323 aaPredicted RBP7.98□□□□□ -1.13
CXCR4-201ENST00000241393 C12orf65Q9H3J6 166 aaKnown RBP7.98□□□□□ -1.13
CXCR4-201ENST00000241393 CCM2LQ9NUG4 571 aaPredicted RBP7.98□□□□□ -1.13
CXCR4-201ENST00000241393 ARL8BQ9NVJ2 186 aa7.98□□□□□ -1.13
CXCR4-201ENST00000241393 RRN3Q9NYV6 651 aa7.98□□□□□ -1.13
CXCR4-201ENST00000241393 FTSJ1Q9UET6 329 aa7.98□□□□□ -1.13
CXCR4-201ENST00000241393 DCDC2Q9UHG0 476 aa7.98□□□□□ -1.13
CXCR4-201ENST00000241393 ADAM28Q9UKQ2 775 aa7.98□□□□□ -1.13
CXCR4-201ENST00000241393 LRRC42Q9Y546 428 aa7.98□□□□□ -1.13
CXCR4-201ENST00000241393 TRIP11Q15643 1979 aa7.98□□□□□ -1.13
CXCR4-201ENST00000241393 CCL15-CCL14A0A0B4J2E2 113 aa7.97□□□□□ -1.13
CXCR4-201ENST00000241393 CAPN14A8MX76 684 aa7.97□□□□□ -1.13
CXCR4-201ENST00000241393 AP3B1O00203 1094 aa7.97□□□□□ -1.13
CXCR4-201ENST00000241393 RNF103O00237 685 aa7.97□□□□□ -1.13
CXCR4-201ENST00000241393 GYG2O15488 501 aa7.97□□□□□ -1.13
CXCR4-201ENST00000241393 MAGEC1O60732 1142 aa7.97□□□□□ -1.13
CXCR4-201ENST00000241393 MYL4P12829 197 aa7.97□□□□□ -1.13
CXCR4-201ENST00000241393 GOT1P17174 413 aa7.97□□□□□ -1.13
CXCR4-201ENST00000241393 LMO2P25791 158 aa7.97□□□□□ -1.13
CXCR4-201ENST00000241393 GPR3P46089 330 aa7.97□□□□□ -1.13
CXCR4-201ENST00000241393 RAP1GDS1P52306 607 aa7.97□□□□□ -1.13
CXCR4-201ENST00000241393 CRYBB1P53674 252 aaPredicted RBP7.97□□□□□ -1.13
CXCR4-201ENST00000241393 CLNS1AP54105 237 aaKnown RBP7.97□□□□□ -1.13
CXCR4-201ENST00000241393 ATXN1P54253 815 aaKnown RBP7.97□□□□□ -1.13
CXCR4-201ENST00000241393 FKBP1BP68106 108 aa7.97□□□□□ -1.13
CXCR4-201ENST00000241393 STX3Q13277 289 aa7.97□□□□□ -1.13
CXCR4-201ENST00000241393 DPYSQ14117 519 aa7.97□□□□□ -1.13
CXCR4-201ENST00000241393 PDCD1Q15116 288 aa7.97□□□□□ -1.13
CXCR4-201ENST00000241393 CHI3L2Q15782 390 aa7.97□□□□□ -1.13
CXCR4-201ENST00000241393 CCL15Q16663 113 aa7.97□□□□□ -1.13
CXCR4-201ENST00000241393 GLRA4Q5JXX5 417 aa7.97□□□□□ -1.13
CXCR4-201ENST00000241393 SPANXN3Q5MJ09 141 aa7.97□□□□□ -1.13
CXCR4-201ENST00000241393 TMEM240Q5SV17 173 aa7.97□□□□□ -1.13
CXCR4-201ENST00000241393 UBXN11Q5T124 520 aa7.97□□□□□ -1.13
CXCR4-201ENST00000241393 PACS1Q6VY07 963 aa7.97□□□□□ -1.13
CXCR4-201ENST00000241393 BMP8AQ7Z5Y6 402 aa7.97□□□□□ -1.13
CXCR4-201ENST00000241393 TEX9Q8N6V9 391 aa7.97□□□□□ -1.13
CXCR4-201ENST00000241393 CDYL2Q8N8U2 506 aa7.97□□□□□ -1.13
CXCR4-201ENST00000241393 COLGALT1Q8NBJ5 622 aa7.97□□□□□ -1.13
CXCR4-201ENST00000241393 OR14C36Q8NHC7 312 aa7.97□□□□□ -1.13
CXCR4-201ENST00000241393 PGAP3Q96FM1 320 aaPredicted RBP7.97□□□□□ -1.13
CXCR4-201ENST00000241393 P2RY11Q96G91 374 aa7.97□□□□□ -1.13
CXCR4-201ENST00000241393 CXCL16Q9H2A7 254 aa7.97□□□□□ -1.13
CXCR4-201ENST00000241393 MS4A5Q9H3V2 200 aa7.97□□□□□ -1.13
CXCR4-201ENST00000241393 DENND2DQ9H6A0 471 aaPredicted RBP7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms