RNA–Protein interactions for RNA: ENST00000237380.11

MED28-201, Transcript of mediator complex subunit 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MED28, Length 10,868 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-201ENST00000237380 PDGFRLQ15198 375 aa7.43□□□□□ -1.22
MED28-201ENST00000237380 MAPKAPK3Q16644 382 aa7.43□□□□□ -1.22
MED28-201ENST00000237380 ZNF57Q68EA5 555 aaPredicted RBP7.43□□□□□ -1.22
MED28-201ENST00000237380 LAYNQ6UX15 382 aa7.43□□□□□ -1.22
MED28-201ENST00000237380 C1orf186Q6ZWK4 172 aa7.43□□□□□ -1.22
MED28-201ENST00000237380 DAW1Q8N136 415 aa7.43□□□□□ -1.22
MED28-201ENST00000237380 ZNF786Q8N393 782 aa7.43□□□□□ -1.22
MED28-201ENST00000237380 PTCD3Q96EY7 689 aaKnown RBP7.43□□□□□ -1.22
MED28-201ENST00000237380 TMEM121Q9BTD3 319 aa7.43□□□□□ -1.22
MED28-201ENST00000237380 C3orf18Q9UK00 162 aa7.43□□□□□ -1.22
MED28-201ENST00000237380 TCHHQ07283 1943 aa7.43□□□□□ -1.22
MED28-201ENST00000237380 SIGLEC16A6NMB1 481 aa7.43□□□□□ -1.22
MED28-201ENST00000237380 ALPPP05187 535 aa7.43□□□□□ -1.22
MED28-201ENST00000237380 ENPEPQ07075 957 aa7.43□□□□□ -1.22
MED28-201ENST00000237380 STX12Q86Y82 276 aa7.43□□□□□ -1.22
MED28-201ENST00000237380 TMEM175Q9BSA9 504 aa7.43□□□□□ -1.22
MED28-201ENST00000237380 CST11Q9H112 138 aa7.43□□□□□ -1.22
MED28-201ENST00000237380 LEF1Q9UJU2 399 aaPredicted RBP7.43□□□□□ -1.22
MED28-201ENST00000237380 AGO1Q9UL18 857 aaKnown RBP7.43□□□□□ -1.22
MED28-201ENST00000237380 RB1P06400 928 aa7.43□□□□□ -1.22
MED28-201ENST00000237380 MLLT3P42568 568 aaPredicted RBP7.43□□□□□ -1.22
MED28-201ENST00000237380 MAPK10P53779 464 aa7.43□□□□□ -1.22
MED28-201ENST00000237380 BNIP2Q12982 314 aa7.43□□□□□ -1.22
MED28-201ENST00000237380 C15orf52Q6ZUT6 534 aaKnown RBP7.43□□□□□ -1.22
MED28-201ENST00000237380 CELF5Q8N6W0 485 aaKnown RBP7.43□□□□□ -1.22
MED28-201ENST00000237380 C12orf66Q96MD2 445 aa7.43□□□□□ -1.22
MED28-201ENST00000237380 ATXN10Q9UBB4 475 aa7.43□□□□□ -1.22
MED28-201ENST00000237380 DUXAA6NLW8 204 aa7.42□□□□□ -1.22
MED28-201ENST00000237380 ALDOAP04075 364 aaKnown RBP7.42□□□□□ -1.22
MED28-201ENST00000237380 C8GP07360 202 aa7.42□□□□□ -1.22
MED28-201ENST00000237380 CHRNGP07510 517 aa7.42□□□□□ -1.22
MED28-201ENST00000237380 HBQ1P09105 142 aa7.42□□□□□ -1.22
MED28-201ENST00000237380 GRK6P43250 576 aa7.42□□□□□ -1.22
MED28-201ENST00000237380 DHFR2Q86XF0 187 aa7.42□□□□□ -1.22
MED28-201ENST00000237380 EIF1ADQ8N9N8 165 aaKnown RBP7.42□□□□□ -1.22
MED28-201ENST00000237380 IRF7Q92985 503 aa7.42□□□□□ -1.22
MED28-201ENST00000237380 PPCDCQ96CD2 204 aa7.42□□□□□ -1.22
MED28-201ENST00000237380 OTUB2Q96DC9 234 aa7.42□□□□□ -1.22
MED28-201ENST00000237380 CCM2Q9BSQ5 444 aa7.42□□□□□ -1.22
MED28-201ENST00000237380 GNEQ9Y223 722 aaKnown RBP7.42□□□□□ -1.22
MED28-201ENST00000237380 MEMO1Q9Y316 297 aa7.42□□□□□ -1.22
MED28-201ENST00000237380 ZNF726A6NNF4 738 aa7.42□□□□□ -1.22
MED28-201ENST00000237380 ADH1BP00325 375 aa7.42□□□□□ -1.22
MED28-201ENST00000237380 FSHRP23945 695 aa7.42□□□□□ -1.22
MED28-201ENST00000237380 ADCYAP1R1P41586 468 aa7.42□□□□□ -1.22
MED28-201ENST00000237380 CASP4P49662 377 aa7.42□□□□□ -1.22
MED28-201ENST00000237380 SPATA19Q7Z5L4 167 aa7.42□□□□□ -1.22
MED28-201ENST00000237380 SLC9B2Q86UD5 537 aa7.42□□□□□ -1.22
MED28-201ENST00000237380 TMEM17Q86X19 198 aa7.42□□□□□ -1.22
MED28-201ENST00000237380 SH2D3CQ8N5H7 860 aa7.42□□□□□ -1.22
MED28-201ENST00000237380 EDEM1Q92611 657 aa7.42□□□□□ -1.22
MED28-201ENST00000237380 UPF1Q92900 1129 aaKnown RBP eCLIP7.42□□□□□ -1.22
MED28-201ENST00000237380 ENY2Q9NPA8 101 aa7.42□□□□□ -1.22
MED28-201ENST00000237380 CCNB1IP1Q9NPC3 277 aa7.42□□□□□ -1.22
MED28-201ENST00000237380 ALKBH4Q9NXW9 302 aa7.42□□□□□ -1.22
MED28-201ENST00000237380 POLLQ9UGP5 575 aa7.42□□□□□ -1.22
MED28-201ENST00000237380 ZDHHC9Q9Y397 364 aa7.42□□□□□ -1.22
MED28-201ENST00000237380 MYH6P13533 1939 aa7.42□□□□□ -1.22
MED28-201ENST00000237380 DUOX1Q9NRD9 1551 aa7.42□□□□□ -1.22
MED28-201ENST00000237380 RGSL1A5PLK6 1076 aa7.42□□□□□ -1.22
MED28-201ENST00000237380 CBSLP0DN79 551 aa7.42□□□□□ -1.22
MED28-201ENST00000237380 CBSP35520 551 aa7.42□□□□□ -1.22
MED28-201ENST00000237380 GRM5P41594 1212 aa7.42□□□□□ -1.22
MED28-201ENST00000237380 CDH4P55283 916 aa7.42□□□□□ -1.22
MED28-201ENST00000237380 ATG9AQ7Z3C6 839 aa7.42□□□□□ -1.22
MED28-201ENST00000237380 ARID3BQ8IVW6 561 aaPredicted RBP7.42□□□□□ -1.22
MED28-201ENST00000237380 NR4A3Q92570 626 aa7.42□□□□□ -1.22
MED28-201ENST00000237380 MYO19Q96H55 970 aa7.42□□□□□ -1.22
MED28-201ENST00000237380 RNF145Q96MT1 663 aa7.42□□□□□ -1.22
MED28-201ENST00000237380 TFE3P19532 575 aaPredicted RBP7.42□□□□□ -1.22
MED28-201ENST00000237380 ELK3P41970 407 aa7.42□□□□□ -1.22
MED28-201ENST00000237380 SSR2P43308 183 aa7.42□□□□□ -1.22
MED28-201ENST00000237380 RBBP4Q09028 425 aa7.42□□□□□ -1.22
MED28-201ENST00000237380 MELKQ14680 651 aa7.42□□□□□ -1.22
MED28-201ENST00000237380 FAM91A1Q658Y4 838 aa7.42□□□□□ -1.22
MED28-201ENST00000237380 FIG4Q92562 907 aa7.42□□□□□ -1.22
MED28-201ENST00000237380 ZDHHC12Q96GR4 267 aa7.42□□□□□ -1.22
MED28-201ENST00000237380 P2RX7Q99572 595 aaKnown RBP7.42□□□□□ -1.22
MED28-201ENST00000237380 EPYCQ99645 322 aa7.42□□□□□ -1.22
MED28-201ENST00000237380 PNPLA8Q9NP80 782 aa7.42□□□□□ -1.22
MED28-201ENST00000237380 PLIN3O60664 434 aa7.42□□□□□ -1.22
MED28-201ENST00000237380 EPHX1P07099 455 aa7.42□□□□□ -1.22
MED28-201ENST00000237380 FMO4P31512 558 aa7.42□□□□□ -1.22
MED28-201ENST00000237380 DLG1Q12959 904 aa7.42□□□□□ -1.22
MED28-201ENST00000237380 SEC23BQ15437 767 aa7.42□□□□□ -1.22
MED28-201ENST00000237380 TBCELQ5QJ74 424 aa7.42□□□□□ -1.22
MED28-201ENST00000237380 DUPD1Q68J44 220 aa7.42□□□□□ -1.22
MED28-201ENST00000237380 KLHL17Q6TDP4 642 aa7.42□□□□□ -1.22
MED28-201ENST00000237380 STYXQ8WUJ0 223 aa7.42□□□□□ -1.22
MED28-201ENST00000237380 RFT1Q96AA3 541 aa7.42□□□□□ -1.22
MED28-201ENST00000237380 TRMT61BQ9BVS5 477 aaKnown RBP7.42□□□□□ -1.22
MED28-201ENST00000237380 LIMD1Q9UGP4 676 aa7.42□□□□□ -1.22
MED28-201ENST00000237380 A0A0A0MRY4 1105 aa7.42□□□□□ -1.22
MED28-201ENST00000237380 G3V2T6 193 aa7.42□□□□□ -1.22
MED28-201ENST00000237380 HRGP04196 525 aa7.42□□□□□ -1.22
MED28-201ENST00000237380 CD2P06729 351 aa7.42□□□□□ -1.22
MED28-201ENST00000237380 ITGA2BP08514 1039 aa7.42□□□□□ -1.22
MED28-201ENST00000237380 ANPEPP15144 967 aa7.42□□□□□ -1.22
MED28-201ENST00000237380 ZNF823P16415 610 aa7.42□□□□□ -1.22
MED28-201ENST00000237380 SMAD3P84022 425 aaKnown RBP7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms