RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 ZNF554Q86TJ5 538 aa13.37□□□□□ -0.27
NEK4-201ENST00000233027 C12orf56Q8IXR9 622 aa13.37□□□□□ -0.27
NEK4-201ENST00000233027 ATL1Q8WXF7 558 aa13.37□□□□□ -0.27
NEK4-201ENST00000233027 SUSD6Q92537 303 aa13.37□□□□□ -0.27
NEK4-201ENST00000233027 BTBD9Q96Q07 612 aa13.37□□□□□ -0.27
NEK4-201ENST00000233027 TINF2Q9BSI4 451 aa13.37□□□□□ -0.27
NEK4-201ENST00000233027 MAGEL2Q9UJ55 1249 aa13.37□□□□□ -0.27
NEK4-201ENST00000233027 C4BPAP04003 597 aaKnown RBP13.37□□□□□ -0.27
NEK4-201ENST00000233027 POLR2JP52435 117 aaKnown RBP13.37□□□□□ -0.27
NEK4-201ENST00000233027 SWT1Q5T5J6 900 aaKnown RBP13.37□□□□□ -0.27
NEK4-201ENST00000233027 GLYATQ6IB77 296 aa13.37□□□□□ -0.27
NEK4-201ENST00000233027 ADGRD1Q6QNK2 874 aa13.37□□□□□ -0.27
NEK4-201ENST00000233027 TEX47Q8TBZ9 253 aa13.37□□□□□ -0.27
NEK4-201ENST00000233027 TWIST2Q8WVJ9 160 aa13.37□□□□□ -0.27
NEK4-201ENST00000233027 CORO1BQ9BR76 489 aa13.37□□□□□ -0.27
NEK4-201ENST00000233027 PDCD10Q9BUL8 212 aa13.37□□□□□ -0.27
NEK4-201ENST00000233027 LHX5Q9H2C1 402 aa13.37□□□□□ -0.27
NEK4-201ENST00000233027 ATXN10Q9UBB4 475 aa13.37□□□□□ -0.27
NEK4-201ENST00000233027 CLEC4AQ9UMR7 237 aa13.37□□□□□ -0.27
NEK4-201ENST00000233027 TRAV19A0A0A6YYK7 116 aa13.37□□□□□ -0.27
NEK4-201ENST00000233027 TBC1D3BA6NDS4 549 aa13.37□□□□□ -0.27
NEK4-201ENST00000233027 SHOX2O60902 331 aaPredicted RBP13.37□□□□□ -0.27
NEK4-201ENST00000233027 MMP8P22894 467 aa13.37□□□□□ -0.27
NEK4-201ENST00000233027 CD52P31358 61 aa13.37□□□□□ -0.27
NEK4-201ENST00000233027 TOMM20Q15388 145 aa13.37□□□□□ -0.27
NEK4-201ENST00000233027 PSMD5Q16401 504 aa13.37□□□□□ -0.27
NEK4-201ENST00000233027 RALGPS1Q5JS13 557 aa13.37□□□□□ -0.27
NEK4-201ENST00000233027 RNASEH2BQ5TBB1 312 aaKnown RBP13.37□□□□□ -0.27
NEK4-201ENST00000233027 LYPLAL1Q5VWZ2 237 aa13.37□□□□□ -0.27
NEK4-201ENST00000233027 FAM131AQ6UXB0 335 aa13.37□□□□□ -0.27
NEK4-201ENST00000233027 COLGALT2Q8IYK4 626 aa13.37□□□□□ -0.27
NEK4-201ENST00000233027 OR2T34Q8NGX1 318 aa13.37□□□□□ -0.27
NEK4-201ENST00000233027 OR2T3Q8NH03 318 aa13.37□□□□□ -0.27
NEK4-201ENST00000233027 LRTOMTQ8WZ04 291 aa13.37□□□□□ -0.27
NEK4-201ENST00000233027 LPGAT1Q92604 370 aa13.37□□□□□ -0.27
NEK4-201ENST00000233027 ATRNO75882 1429 aa13.37□□□□□ -0.27
NEK4-201ENST00000233027 SPATA31D1Q6ZQQ2 1576 aa13.37□□□□□ -0.27
NEK4-201ENST00000233027 IRF6O14896 467 aa13.36□□□□□ -0.27
NEK4-201ENST00000233027 HIST1H2ABP04908 130 aa13.36□□□□□ -0.27
NEK4-201ENST00000233027 CHRNGP07510 517 aa13.36□□□□□ -0.27
NEK4-201ENST00000233027 RCVRNP35243 200 aa13.36□□□□□ -0.27
NEK4-201ENST00000233027 TRAP1Q12931 704 aaKnown RBP13.36□□□□□ -0.27
NEK4-201ENST00000233027 HIST3H2AQ7L7L0 130 aa13.36□□□□□ -0.27
NEK4-201ENST00000233027 C2orf73Q8N5S3 287 aaPredicted RBP13.36□□□□□ -0.27
NEK4-201ENST00000233027 DCBLD1Q8N8Z6 715 aa13.36□□□□□ -0.27
NEK4-201ENST00000233027 LRRC57Q8N9N7 239 aa13.36□□□□□ -0.27
NEK4-201ENST00000233027 HIST1H2ACQ93077 130 aa13.36□□□□□ -0.27
NEK4-201ENST00000233027 S100A13Q99584 98 aa13.36□□□□□ -0.27
NEK4-201ENST00000233027 AGO3Q9H9G7 860 aaKnown RBP13.36□□□□□ -0.27
NEK4-201ENST00000233027 GLOD4Q9HC38 313 aa13.36□□□□□ -0.27
NEK4-201ENST00000233027 SYNPO2Q9UMS6 1093 aa13.36□□□□□ -0.27
NEK4-201ENST00000233027 ST3GAL5Q9UNP4 418 aa13.36□□□□□ -0.27
NEK4-201ENST00000233027 PCDHB9Q9Y5E1 797 aa13.36□□□□□ -0.27
NEK4-201ENST00000233027 BBIP1A8MTZ0 92 aa13.36□□□□□ -0.27
NEK4-201ENST00000233027 LOC110117498-PIK3R3F6TDL0 507 aa13.36□□□□□ -0.27
NEK4-201ENST00000233027 PSIP1O75475 530 aaKnown RBP13.36□□□□□ -0.27
NEK4-201ENST00000233027 TGDSO95455 350 aa13.36□□□□□ -0.27
NEK4-201ENST00000233027 FTH1P02794 183 aa13.36□□□□□ -0.27
NEK4-201ENST00000233027 ARF4P18085 180 aaPredicted RBP13.36□□□□□ -0.27
NEK4-201ENST00000233027 IL18R1Q13478 541 aa13.36□□□□□ -0.27
NEK4-201ENST00000233027 ZNF460Q14592 562 aa13.36□□□□□ -0.27
NEK4-201ENST00000233027 LPIN1Q14693 890 aa13.36□□□□□ -0.27
NEK4-201ENST00000233027 UBE2R2Q712K3 238 aaPredicted RBP13.36□□□□□ -0.27
NEK4-201ENST00000233027 NANOGNBQ7Z5D8 188 aa13.36□□□□□ -0.27
NEK4-201ENST00000233027 SOCS4Q8WXH5 440 aa13.36□□□□□ -0.27
NEK4-201ENST00000233027 TSSK3Q96PN8 268 aa13.36□□□□□ -0.27
NEK4-201ENST00000233027 HOPXQ9BPY8 73 aaPredicted RBP13.36□□□□□ -0.27
NEK4-201ENST00000233027 FAIM2Q9BWQ8 316 aa13.36□□□□□ -0.27
NEK4-201ENST00000233027 MCUBQ9NWR8 336 aa13.36□□□□□ -0.27
NEK4-201ENST00000233027 IPO13O94829 963 aaKnown RBP13.36□□□□□ -0.27
NEK4-201ENST00000233027 SLC6A2P23975 617 aa13.36□□□□□ -0.27
NEK4-201ENST00000233027 GRM5P41594 1212 aa13.36□□□□□ -0.27
NEK4-201ENST00000233027 CDK9P50750 372 aaKnown RBP13.36□□□□□ -0.27
NEK4-201ENST00000233027 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.36□□□□□ -0.27
NEK4-201ENST00000233027 SLC34A3Q8N130 599 aa13.36□□□□□ -0.27
NEK4-201ENST00000233027 UBE2E3Q969T4 207 aa13.36□□□□□ -0.27
NEK4-201ENST00000233027 PPP1R16AQ96I34 528 aa13.36□□□□□ -0.27
NEK4-201ENST00000233027 AARSD1Q9BTE6 412 aaKnown RBP13.36□□□□□ -0.27
NEK4-201ENST00000233027 PDP1Q9P0J1 537 aaPredicted RBP13.36□□□□□ -0.27
NEK4-201ENST00000233027 CNTNAP1P78357 1384 aa13.36□□□□□ -0.27
NEK4-201ENST00000233027 A0A088AWK7 358 aa13.36□□□□□ -0.27
NEK4-201ENST00000233027 ZNF10P21506 573 aaPredicted RBP13.36□□□□□ -0.27
NEK4-201ENST00000233027 MYL9P24844 172 aa13.36□□□□□ -0.27
NEK4-201ENST00000233027 PEX2P28328 305 aa13.36□□□□□ -0.27
NEK4-201ENST00000233027 PTGIRP43119 386 aa13.36□□□□□ -0.27
NEK4-201ENST00000233027 PSMD4P55036 377 aaKnown RBP13.36□□□□□ -0.27
NEK4-201ENST00000233027 RHAGQ02094 409 aa13.36□□□□□ -0.27
NEK4-201ENST00000233027 ITGA7Q13683 1181 aa13.36□□□□□ -0.27
NEK4-201ENST00000233027 SIM2Q14190 667 aaPredicted RBP13.36□□□□□ -0.27
NEK4-201ENST00000233027 AKAP14Q86UN6 197 aa13.36□□□□□ -0.27
NEK4-201ENST00000233027 CYP4X1Q8N118 509 aa13.36□□□□□ -0.27
NEK4-201ENST00000233027 PYROXD2Q8N2H3 581 aa13.36□□□□□ -0.27
NEK4-201ENST00000233027 CPSF7Q8N684 471 aaKnown RBP13.36□□□□□ -0.27
NEK4-201ENST00000233027 PLD5Q8N7P1 536 aa13.36□□□□□ -0.27
NEK4-201ENST00000233027 ADCY4Q8NFM4 1077 aa13.36□□□□□ -0.27
NEK4-201ENST00000233027 NKX2-3Q8TAU0 364 aa13.36□□□□□ -0.27
NEK4-201ENST00000233027 BORCS5Q969J3 196 aa13.36□□□□□ -0.27
NEK4-201ENST00000233027 AZIN2Q96A70 460 aa13.36□□□□□ -0.27
NEK4-201ENST00000233027 RAD51AP1Q96B01 352 aa13.36□□□□□ -0.27
NEK4-201ENST00000233027 FERD3LQ96RJ6 166 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms